BLASTX nr result
ID: Ophiopogon26_contig00035044
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00035044
(582 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 132 5e-32
emb|CDP17739.1| unnamed protein product [Coffea canephora] 129 7e-32
gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus... 127 1e-30
emb|CDP17738.1| unnamed protein product [Coffea canephora] 127 1e-30
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 120 5e-28
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 112 2e-25
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ... 103 7e-24
ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944... 100 1e-23
gb|PNX57796.1| putative retrotransposon Ty1-copia subclass prote... 103 2e-23
gb|KYP35963.1| Retrovirus-related Pol polyprotein from transposo... 102 3e-23
gb|KYP58493.1| Retrovirus-related Pol polyprotein from transposo... 103 4e-23
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 105 9e-23
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 105 9e-23
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 105 9e-23
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 105 9e-23
gb|KYP46867.1| Retrovirus-related Pol polyprotein from transposo... 101 1e-22
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 105 1e-22
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 105 1e-22
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 105 1e-22
gb|PNX59197.1| retrovirus-related Pol polyprotein from transposo... 98 1e-22
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 132 bits (331), Expect = 5e-32
Identities = 65/153 (42%), Positives = 93/153 (60%), Gaps = 5/153 (3%)
Frame = +1
Query: 10 NFYYLKDSA-----ESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAP 174
N YY + S + T S +D +AA +LWH+RLGHA E SL++L +QG + G
Sbjct: 330 NLYYYQGSTVVGTVAAATSSSKKDAEAA----KLWHMRLGHAGEKSLQILTKQGLLKGTK 385
Query: 175 TCRVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDH 354
C++E C++ Q+RV+ T H++ + + VH DVW P K+ SIGG +FV+FVDD
Sbjct: 386 ACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDF 445
Query: 355 SRYCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
SR W+ TM + +VLEIF KW+ +E T RK
Sbjct: 446 SRRVWVFTMKNKNDVLEIFLKWKAEVENHTGRK 478
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 129 bits (323), Expect = 7e-32
Identities = 60/141 (42%), Positives = 92/141 (65%)
Frame = +1
Query: 31 SAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQR 210
+A + + S +D +A T+LWH+RLGHA E SL+ LA+QG + G C++E C++
Sbjct: 36 AAATTSSSSKKDAEA----TKLWHMRLGHAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVL 91
Query: 211 DDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR 390
+ Q++V+ T H++ + + VH +VW P K+ S+GG +FV+F+DD SR W+ TM +
Sbjct: 92 EKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSK 151
Query: 391 *EVLEIFKKWRKCIEAQTRRK 453
EVLEIF KW+ +E QT RK
Sbjct: 152 DEVLEIFLKWKARVENQTGRK 172
>gb|ONK68196.1| uncharacterized protein A4U43_C05F8640 [Asparagus officinalis]
Length = 631
Score = 127 bits (319), Expect = 1e-30
Identities = 54/122 (44%), Positives = 86/122 (70%)
Frame = +1
Query: 88 TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQ 267
++LWH RLGH SE+SL++L +Q + GA + ++E C++ + +V+ T H + +
Sbjct: 371 SKLWHYRLGHTSENSLQILCKQRLLKGAKSGKIEFCEHCVLGKKTKVKFGTSIHQTRGIM 430
Query: 268 ELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTR 447
+ +H DVW TK+ S+GG WFV+FVDD+SR+CW+ TM+++ EVL+IF +W+K +E QT
Sbjct: 431 DYMHTDVWGLTKNVSLGGQHWFVTFVDDYSRHCWVYTMTKKSEVLDIFVEWKKRLELQTG 490
Query: 448 RK 453
RK
Sbjct: 491 RK 492
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 127 bits (320), Expect = 1e-30
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 6/157 (3%)
Frame = +1
Query: 1 RTTNFYYLKDS------AESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHI 162
R N YY + S A + + S +D +A T+LWH+RLG A E SL+ LA+QG +
Sbjct: 412 RKNNLYYYQGSTVVGTAAVATSSSSKKDAEA----TKLWHMRLGDAGEKSLQNLAKQGLL 467
Query: 163 DGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSF 342
G C++E C++ + Q++V+ T H++ + + VH DVW P K+ S+GG +FV+F
Sbjct: 468 KGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYFVTF 527
Query: 343 VDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
+DD SR W+ TM + E+L+IF KW+ +E QT RK
Sbjct: 528 IDDFSRRVWVFTMKSKDEMLKIFLKWKARVENQTGRK 564
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 120 bits (301), Expect = 5e-28
Identities = 55/151 (36%), Positives = 88/151 (58%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
+ YY + + T + + + +LWH+RLGHA E SL +L +QG + C
Sbjct: 177 KNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQAC 236
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ + + RV+ T H + + + VH DVW P+K+AS+ G+ ++V+FVDD SR
Sbjct: 237 KLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSR 296
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W+ M + EVL IF KW+K +E QT RK
Sbjct: 297 RIWVYAMKTKDEVLGIFLKWKKRMETQTGRK 327
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 112 bits (281), Expect = 2e-25
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Frame = +1
Query: 52 GSSRDGDAAMIP-----TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDD 216
G++ GD A + T+LWHLRLGH SE + L ++ + G +C+++ C Y
Sbjct: 324 GNTVVGDVASVESDNDATKLWHLRLGHLSERGMMELHKRSLLKGVCSCKMDLCKYCVLGK 383
Query: 217 QKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*E 396
Q RVR H + + + VH DVW PT+ AS+GG R+FV+F DD SR W+ M Q+ E
Sbjct: 384 QCRVRFKPMKHKTEGILDYVHSDVWGPTREASMGGSRYFVTFTDDFSRKLWVYFMKQKSE 443
Query: 397 VLEIFKKWRKCIEAQTRRK 453
V FK W+ +E QT RK
Sbjct: 444 VFSKFKLWKAEVENQTGRK 462
>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
erythrorhizon]
Length = 244
Score = 103 bits (258), Expect = 7e-24
Identities = 50/122 (40%), Positives = 72/122 (59%)
Frame = +1
Query: 88 TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQ 267
T +WH+RLGH SE L +L+ QG + +E C+++ R++ T H S L
Sbjct: 108 TMIWHMRLGHMSEKGLSLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLL 167
Query: 268 ELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTR 447
+ VH D+W P K S G +FV+FVDD+SRY WI + + EV +IFK+WR +E +T
Sbjct: 168 DYVHTDLWGPAKVNSKDGSWYFVTFVDDYSRYAWIYFLKHKNEVFDIFKQWRAMVENRTG 227
Query: 448 RK 453
RK
Sbjct: 228 RK 229
>ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944919, partial [Nicotiana
tomentosiformis]
Length = 148
Score = 100 bits (250), Expect = 1e-23
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
+ N Y + S T + D + TRLWH+RLGHA SL+ L+ QG + G TC
Sbjct: 16 KNNNMYRYRGSTVIGTATVTSSDDKEVEATRLWHMRLGHAGGKSLKALSNQGLLKGVKTC 75
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+E C++ + Q RV+ T H++ + + V+ D+W +K S+GG +FV+FVD+ R
Sbjct: 76 NLEFCEHCVKGKQIRVKFGTAIHNTKGILDYVYSDIWGSSKIPSLGGKHYFVTFVDNFFR 135
Query: 361 YCWIATMSQR*EV 399
W+ TM ++ EV
Sbjct: 136 RVWVYTMKRKDEV 148
>gb|PNX57796.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 285
Score = 103 bits (258), Expect = 2e-23
Identities = 49/122 (40%), Positives = 70/122 (57%)
Frame = +1
Query: 88 TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQ 267
TR+WH+RLGH SE L +L +G + +E C++ R+R + H S +
Sbjct: 58 TRMWHMRLGHMSEKGLSLLGEKGLLKNMEKPCMEFCEHCVYGKAHRLRFSSSKHKSRGIL 117
Query: 268 ELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTR 447
+ VH DVW P S GG R+FV++VDDHSRY WI + + EV + FK W+ +E +T
Sbjct: 118 DYVHTDVWGPAPVTSKGGSRYFVTYVDDHSRYAWIYFLKHKNEVFDNFKCWKAMVENRTG 177
Query: 448 RK 453
RK
Sbjct: 178 RK 179
>gb|KYP35963.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 255
Score = 102 bits (255), Expect = 3e-23
Identities = 44/121 (36%), Positives = 72/121 (59%)
Frame = +1
Query: 91 RLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQE 270
RLWHLRL H SE L +QG +G +++ C++ QK+ + T H++ E+ +
Sbjct: 122 RLWHLRLAHISEKEFEELHKQGLFEGTKYKKLDFCEHCLYGKQKKAKFPTGTHNTKEILD 181
Query: 271 LVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTRR 450
VH D+W P K+ S+GG R+++SF+D SR WI + + + +IFK W+ +E QT +
Sbjct: 182 YVHYDIWGPAKTQSLGGARYYISFIDHLSRKVWIYLLKHKNQAFKIFKWWKDLVETQTGK 241
Query: 451 K 453
+
Sbjct: 242 Q 242
>gb|KYP58493.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 313
Score = 103 bits (257), Expect = 4e-23
Identities = 48/119 (40%), Positives = 73/119 (61%)
Frame = +1
Query: 88 TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQ 267
T+LWH RLGH SE L VL++QG + GA T ++E C+ Q+R++ H STE+
Sbjct: 129 TKLWHCRLGHMSERGLAVLSKQGLLGGAVTGKLEFCESCVMGKQRRLKFSHGKHTSTEIL 188
Query: 268 ELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQT 444
+ H D+W P+ S G R+FV+F+DD+SR W+ + + EV FK+W+ +E +T
Sbjct: 189 QYFHSDLWGPSPVQSHGRSRYFVTFIDDYSRKVWVYFLKSKDEVFGHFKEWKTMVEKRT 247
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 105 bits (262), Expect = 9e-23
Identities = 48/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
++ N Y+L+ + + D + T LWH+RLGH SE L L+++G +DG
Sbjct: 236 KSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIG 295
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ KRV+ +T H + + + VH D+W P + S GG R+ ++ VDD+SR
Sbjct: 296 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 355
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W + + + ++FK+W+ +E QT RK
Sbjct: 356 KVWPYFLKHKYQAFDVFKEWKTMVERQTERK 386
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 105 bits (262), Expect = 9e-23
Identities = 48/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
++ N Y+L+ + + D + T LWH+RLGH SE L L+++G +DG
Sbjct: 236 KSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIG 295
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ KRV+ +T H + + + VH D+W P + S GG R+ ++ VDD+SR
Sbjct: 296 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSR 355
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W + + + ++FK+W+ +E QT RK
Sbjct: 356 KVWPYFLKHKYQAFDVFKEWKTMVERQTERK 386
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 105 bits (262), Expect = 9e-23
Identities = 48/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
++ N Y+L+ + + D + T LWH+RLGH SE L L+++G +DG
Sbjct: 365 KSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIK 424
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ KRV+ +T H + + + VH D+W P + S GG R+ ++ VDD+SR
Sbjct: 425 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 484
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W + + + ++FK+W+ +E QT RK
Sbjct: 485 KVWPYFLKHKYQAFDVFKEWKTMVERQTERK 515
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 105 bits (262), Expect = 9e-23
Identities = 48/151 (31%), Positives = 84/151 (55%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
++ N Y+L+ + + D + T LWH+RLGH SE L L+++G +DG
Sbjct: 419 KSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIK 478
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ KRV+ +T H + + + VH D+W P + S GG R+ ++ VDD+SR
Sbjct: 479 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 538
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W + + + ++FK+W+ +E QT RK
Sbjct: 539 KVWPYFLKHKYQAFDVFKEWKTMVERQTERK 569
>gb|KYP46867.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 253
Score = 101 bits (251), Expect = 1e-22
Identities = 47/119 (39%), Positives = 74/119 (62%)
Frame = +1
Query: 88 TRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHHSTELQ 267
T+LWH RLGH SE L VL++QG + GA T +++ C+ Q+R++ + H STE+
Sbjct: 104 TKLWHCRLGHMSERGLVVLSKQGLLGGAVTGKLKFCESCVMGKQRRLKFNHGKHTSTEIL 163
Query: 268 ELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQT 444
+ VH D+W P+ G R+FV+F+DD+SR W+ + + EV FK+W+ +E +T
Sbjct: 164 QYVHSDLWGPSPVQFHGRSRYFVTFIDDYSRKVWVYFLKSKDEVFGRFKEWKTMVEKRT 222
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 105 bits (261), Expect = 1e-22
Identities = 48/151 (31%), Positives = 83/151 (54%)
Frame = +1
Query: 1 RTTNFYYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTC 180
++ N Y+L+ + + D + T LWH+RLGH SE L L+++G +DG
Sbjct: 404 KSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIS 463
Query: 181 RVESCDYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSR 360
+++ C++ KRV+ +T H + + + VH D+W P + S GG R+ ++ VDD+SR
Sbjct: 464 KLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSR 523
Query: 361 YCWIATMSQR*EVLEIFKKWRKCIEAQTRRK 453
W + + + +FK+W+ +E QT RK
Sbjct: 524 KVWPYFLKHKYQAFNVFKEWKTMVERQTERK 554
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 105 bits (261), Expect = 1e-22
Identities = 52/146 (35%), Positives = 84/146 (57%)
Frame = +1
Query: 16 YYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESC 195
Y+L S+ + G S D T+LWH+RLGH SE L VL+++G + G T ++ C
Sbjct: 916 YFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFC 975
Query: 196 DYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIA 375
++ Q RV+ T H + + H D+W P+ + S GG+R+ ++F+DD+SR W+
Sbjct: 976 EHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVY 1035
Query: 376 TMSQR*EVLEIFKKWRKCIEAQTRRK 453
+ + EVL FK+++ IE QT +K
Sbjct: 1036 FLKSKYEVLINFKQFKALIENQTGKK 1061
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 105 bits (261), Expect = 1e-22
Identities = 52/146 (35%), Positives = 84/146 (57%)
Frame = +1
Query: 16 YYLKDSAESWTQGSSRDGDAAMIPTRLWHLRLGHASESSLRVLARQGHIDGAPTCRVESC 195
Y+L S+ + G S D T+LWH+RLGH SE L VL+++G + G T ++ C
Sbjct: 895 YFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFC 954
Query: 196 DYYQRDDQKRVRLDTFAHHSTELQELVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIA 375
++ Q RV+ T H + + H D+W P+ + S GG+R+ ++F+DD+SR W+
Sbjct: 955 EHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVY 1014
Query: 376 TMSQR*EVLEIFKKWRKCIEAQTRRK 453
+ + EVL FK+++ IE QT +K
Sbjct: 1015 FLKSKYEVLINFKQFKALIENQTGKK 1040
>gb|PNX59197.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 154
Score = 98.2 bits (243), Expect = 1e-22
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +1
Query: 94 LWHLRLGHASESSLRVLARQGHIDGAPTCRVESCDYYQRDDQKRVRLDTFAHH-STELQE 270
LWH RLGH SE ++V+ +G + + ++ C+ Q+RV T E E
Sbjct: 32 LWHQRLGHMSEKGMKVMHSKGKLPSLQSIEIDICEDCILGKQRRVSFQTSGRTPKKERLE 91
Query: 271 LVHMDVWEPTKSASIGGHRWFVSFVDDHSRYCWIATMSQR*EVLEIFKKWRKCIEAQTRR 450
LVH DVW PT +S+GG +FV+F+DDHSR W+ + + +V E FK+W+ +E +T
Sbjct: 92 LVHSDVWGPTTVSSVGGKNYFVTFIDDHSRKVWVYFLKHKSDVFEAFKRWKAMVENETGL 151
Query: 451 K 453
K
Sbjct: 152 K 152