BLASTX nr result

ID: Ophiopogon26_contig00034966 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034966
         (609 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411707.2| PREDICTED: classical arabinogalactan protein...    59   2e-07
ref|XP_010921722.1| PREDICTED: classical arabinogalactan protein...    56   2e-06

>ref|XP_009411707.2| PREDICTED: classical arabinogalactan protein 26-like [Musa
           acuminata subsp. malaccensis]
          Length = 154

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
 Frame = -3

Query: 430 FASLPPALPPDLMPVFPSPKRGATXXXXXXXXXXXXXXXXXXXXXXXPQSAIAPLGSEAM 251
           F+SL PAL PD+MPVFP+P   A                        P SA AP GS A+
Sbjct: 62  FSSLAPALAPDVMPVFPTPGGSAAAPPASSLPTIPSSPSPPNPDELQPNSATAPSGSAAL 121

Query: 250 SSAAA--RGSLVN-SLAAVSVMLSMWWLE 173
           +SAAA  RGSL   S+A V+ +L MWWL+
Sbjct: 122 TSAAARSRGSLGGVSVAMVAGLLLMWWLD 150


>ref|XP_010921722.1| PREDICTED: classical arabinogalactan protein 26 [Elaeis guineensis]
          Length = 150

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = -3

Query: 427 ASLPPALPPDLMPVFPSPKRGATXXXXXXXXXXXXXXXXXXXXXXXPQSAIAPLGSEAMS 248
           +S+PP L PD+MP+FPSP   A                        P SAI P GS A S
Sbjct: 59  SSIPPTLAPDMMPLFPSPGGSAGAAPAGTLPTIPSSPSPPNPDELEPNSAITPSGSAAAS 118

Query: 247 SAAARGSLVN----SLAAVSVMLSMWWLE 173
           SAA+  SL N    S+  V  ++ MWWLE
Sbjct: 119 SAASSSSLRNLGGMSMVLVCGLVLMWWLE 147


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