BLASTX nr result
ID: Ophiopogon26_contig00034958
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00034958
(485 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophio... 342 e-107
gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Lirio... 340 e-106
gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) ... 325 e-104
ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [... 334 e-104
ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [N... 330 e-102
gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasyl... 330 e-102
ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [... 330 e-102
gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beauc... 329 e-102
gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) ... 318 e-102
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu... 327 e-101
gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maian... 325 e-100
ref|YP_009334565.1| RNA polymerase beta subunit (chloroplast) [B... 323 e-100
ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [H... 323 e-100
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse... 322 e-100
ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [... 322 1e-99
ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) ... 322 2e-99
ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [A... 322 2e-99
ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [M... 322 2e-99
ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Y... 321 2e-99
gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) ... 312 3e-99
>gb|AEX94833.1| RNA polymerase beta' subunit (chloroplast) [Ophiopogon japonicus]
Length = 1381
Score = 342 bits (878), Expect = e-107
Identities = 161/161 (100%), Positives = 161/161 (100%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG
Sbjct: 913 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 972
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 973 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1032
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL
Sbjct: 1033 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 1073
>gb|AEX94832.1| RNA polymerase beta' subunit (chloroplast) [Liriope spicata]
Length = 1385
Score = 340 bits (871), Expect = e-106
Identities = 160/161 (99%), Positives = 160/161 (99%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG
Sbjct: 917 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL
Sbjct: 1037 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 1077
>gb|ABD93802.1| RNA polymerase beta chain, partial (chloroplast) [Beaucarnea
recurvata]
Length = 830
Score = 325 bits (834), Expect = e-104
Identities = 153/161 (95%), Positives = 156/161 (96%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVT+HQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 442 PLVTKHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLG 501
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIV FYSSYHLITHNQILLNKYW+LDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 502 PLGTIVPKIVKFYSSYHLITHNQILLNKYWVLDNFKQTFQVLEVLKYCLIDENRRIYNPS 561
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 562 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 602
>ref|YP_009183189.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
ref|YP_009236350.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
gb|ALM87707.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum
verticillatum]
gb|AMF84063.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Polygonatum
sibiricum]
Length = 1382
Score = 334 bits (856), Expect = e-104
Identities = 157/161 (97%), Positives = 158/161 (98%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 914 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>ref|YP_009335323.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
gb|AEZ49490.1| RNA polymerase beta'' subunit, partial (plastid) [Nolina atopocarpa]
gb|APO12381.1| RNA polymerase beta subunit (chloroplast) [Nolina atopocarpa]
Length = 1385
Score = 330 bits (847), Expect = e-102
Identities = 156/161 (96%), Positives = 157/161 (97%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 917 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1037 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 1077
>gb|AEX94830.1| RNA polymerase beta' subunit (chloroplast) [Dasylirion wheeleri]
Length = 1385
Score = 330 bits (847), Expect = e-102
Identities = 156/161 (96%), Positives = 157/161 (97%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 917 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1037 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 1077
>ref|YP_009432293.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
gb|ATB18548.1| RNA polymerase beta' subunit (chloroplast) [Polygonatum stenophyllum]
Length = 1381
Score = 330 bits (845), Expect = e-102
Identities = 155/160 (96%), Positives = 157/160 (98%)
Frame = +1
Query: 4 LVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLGP 183
LVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLGP
Sbjct: 914 LVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLGP 973
Query: 184 LGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPSP 363
LGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTF+VLEVLKYCLIDENRRIYNPSP
Sbjct: 974 LGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFKVLEVLKYCLIDENRRIYNPSP 1033
Query: 364 CNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
CNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 CNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 1073
>gb|AEX94829.1| RNA polymerase beta' subunit (chloroplast) [Beaucarnea hookeri]
Length = 1385
Score = 329 bits (843), Expect = e-102
Identities = 155/161 (96%), Positives = 157/161 (97%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVT+HQGTIGTLLNRNKEGQSL ILSSFNCFRV PFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 917 PLVTKHQGTIGTLLNRNKEGQSLRILSSFNCFRVVPFNGSKYNNVAKESNPITPIRGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1037 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENICL 1077
>gb|ABD93844.1| RNA polymerase beta chain, partial (chloroplast) [Agave attenuata]
Length = 761
Score = 318 bits (814), Expect = e-102
Identities = 149/161 (92%), Positives = 153/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKY++ AKESNPITPI+ LLG
Sbjct: 375 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYHDAAKESNPITPIRDLLG 434
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 435 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 494
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 495 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 535
>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
Length = 1387
Score = 327 bits (839), Expect = e-101
Identities = 154/161 (95%), Positives = 155/161 (96%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNV KESNPITPI+GLLG
Sbjct: 917 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVTKESNPITPIRGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLG IVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGIIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCEETST ISIGQF CEN CL
Sbjct: 1037 PCNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENRCL 1077
>gb|AEX94836.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum stellatum]
Length = 1385
Score = 325 bits (833), Expect = e-100
Identities = 154/161 (95%), Positives = 156/161 (96%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 917 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLG 976
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 977 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1036
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
P NNIILNPSHLNWCFLHYNYCEETST ISIGQF CENI +
Sbjct: 1037 PWNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENISI 1077
>ref|YP_009334565.1| RNA polymerase beta subunit (chloroplast) [Beschorneria
septentrionalis]
gb|APO11458.1| RNA polymerase beta subunit (chloroplast) [Beschorneria
septentrionalis]
Length = 1384
Score = 323 bits (828), Expect = e-100
Identities = 152/161 (94%), Positives = 154/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLG
Sbjct: 914 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>ref|YP_009335154.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
gb|APO12212.1| RNA polymerase beta subunit (chloroplast) [Hosta ventricosa]
Length = 1384
Score = 323 bits (828), Expect = e-100
Identities = 152/161 (94%), Positives = 154/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPI+ LLG
Sbjct: 914 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIRDLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
Length = 1384
Score = 322 bits (826), Expect = e-100
Identities = 150/161 (93%), Positives = 154/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCF VGPFNGSKYNNV KESNPITPI+GLLG
Sbjct: 914 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFGVGPFNGSKYNNVVKESNPITPIRGLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWL DNFKQTFQVL+VLKYCLIDEN+RIYNPS
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLFDNFKQTFQVLQVLKYCLIDENKRIYNPS 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNPSHLNWCFLHYNYCE+T T ISIGQF CENICL
Sbjct: 1034 PCNNIILNPSHLNWCFLHYNYCEKTPTIISIGQFICENICL 1074
>ref|YP_009431208.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
gb|ASW26644.1| RNA polymerase beta' subunit (chloroplast) [Maianthemum bicolor]
Length = 1381
Score = 322 bits (825), Expect = 1e-99
Identities = 153/161 (95%), Positives = 155/161 (96%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQGTIGTLLNRNKEGQSL ILSSFNCFRVGPFNGSKYNNVAKESNPITPI+GLLG
Sbjct: 913 PLVTQHQGTIGTLLNRNKEGQSLRILSSFNCFRVGPFNGSKYNNVAKESNPITPIRGLLG 972
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNF SSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS
Sbjct: 973 PLGTIVPKIVNFSSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 1032
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
P NNIILNPSHLNWCFLHYNYCEETST ISIGQF CENI +
Sbjct: 1033 PSNNIILNPSHLNWCFLHYNYCEETSTIISIGQFICENISI 1073
>ref|YP_009327294.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
gb|AOV94028.1| RNA polymerase beta'' subunit (chloroplast) [Agave americana]
Length = 1380
Score = 322 bits (824), Expect = 2e-99
Identities = 151/161 (93%), Positives = 153/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLG
Sbjct: 910 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLG 969
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 970 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1029
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1030 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1070
>ref|YP_009334309.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
gb|APO11119.1| RNA polymerase beta subunit (chloroplast) [Agave attenuata]
Length = 1384
Score = 322 bits (824), Expect = 2e-99
Identities = 151/161 (93%), Positives = 153/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLG
Sbjct: 914 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>ref|YP_009335237.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
gb|APO12295.1| RNA polymerase beta subunit (chloroplast) [Manfreda virginica]
Length = 1384
Score = 322 bits (824), Expect = 2e-99
Identities = 151/161 (93%), Positives = 153/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNGSKYNN AKESNPITPI+ LLG
Sbjct: 914 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGSKYNNAAKESNPITPIRDLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>ref|YP_009335578.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
ref|YP_009335748.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
ref|YP_009335833.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
gb|AAZ03984.1| RNA polymerase beta'' chain, partial (chloroplast) [Yucca schidigera]
gb|APO12722.1| RNA polymerase beta subunit (chloroplast) [Yucca brevifolia]
gb|APO12892.1| RNA polymerase beta subunit (chloroplast) [Yucca queretaroensis]
gb|APO12977.1| RNA polymerase beta subunit (chloroplast) [Yucca schidigera]
Length = 1384
Score = 321 bits (823), Expect = 2e-99
Identities = 151/161 (93%), Positives = 153/161 (95%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PLVTQHQ T+GTLLNRNKE QSLIILSSFNCFRVGPFNG KYNNVAKESNPITPI+ LLG
Sbjct: 914 PLVTQHQETVGTLLNRNKECQSLIILSSFNCFRVGPFNGPKYNNVAKESNPITPIRDLLG 973
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNP
Sbjct: 974 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPG 1033
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFLHYNYCEETST ISIGQF CENICL
Sbjct: 1034 PCNNIILNPFHLNWCFLHYNYCEETSTIISIGQFICENICL 1074
>gb|ABD93833.1| RNA polymerase beta chain, partial (chloroplast) [Xanthorrhoea
quadrangulata]
Length = 811
Score = 312 bits (799), Expect = 3e-99
Identities = 147/161 (91%), Positives = 150/161 (93%)
Frame = +1
Query: 1 PLVTQHQGTIGTLLNRNKEGQSLIILSSFNCFRVGPFNGSKYNNVAKESNPITPIKGLLG 180
PL TQHQGTIGTLLNRNKE QSLIILSSFNC RVGPFNGSKYNNV KESNPITPI+ LLG
Sbjct: 416 PLFTQHQGTIGTLLNRNKECQSLIILSSFNCSRVGPFNGSKYNNVTKESNPITPIRDLLG 475
Query: 181 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQTFQVLEVLKYCLIDENRRIYNPS 360
PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQ FQVLEV KYCLIDENRRIYNP
Sbjct: 476 PLGTIVPKIVNFYSSYHLITHNQILLNKYWLLDNFKQIFQVLEVFKYCLIDENRRIYNPG 535
Query: 361 PCNNIILNPSHLNWCFLHYNYCEETSTTISIGQFFCENICL 483
PCNNIILNP HLNWCFL++NYCEETST ISIGQF CENICL
Sbjct: 536 PCNNIILNPLHLNWCFLYHNYCEETSTIISIGQFICENICL 576