BLASTX nr result
ID: Ophiopogon26_contig00034935
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00034935
(641 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK56033.1| uncharacterized protein A4U43_C10F3440 [Asparagus... 200 2e-59
ref|XP_020104196.1| chromodomain-helicase-DNA-binding protein 3-... 77 8e-13
ref|XP_015639963.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type ch... 68 1e-09
gb|OAY75776.1| CHD3-type chromatin-remodeling factor PICKLE [Ana... 67 2e-09
dbj|BAS75560.1| Os01g0881000 [Oryza sativa Japonica Group] 67 4e-09
gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japo... 66 5e-09
dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza... 66 5e-09
ref|XP_020157969.1| chromodomain-helicase-DNA-binding protein 3-... 64 2e-08
gb|EEC71901.1| hypothetical protein OsI_04668 [Oryza sativa Indi... 64 2e-08
ref|XP_020157961.1| CHD3-type chromatin-remodeling factor PICKLE... 62 1e-07
ref|XP_020157960.1| CHD3-type chromatin-remodeling factor PICKLE... 62 1e-07
ref|XP_020157959.1| CHD3-type chromatin-remodeling factor PICKLE... 62 1e-07
ref|XP_020531736.1| chromodomain-helicase-DNA-binding protein 3 ... 58 3e-06
ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 ... 58 3e-06
ref|XP_021312012.1| CHD3-type chromatin-remodeling factor PICKLE... 57 5e-06
gb|KXG33813.2| hypothetical protein SORBI_3003G377300 [Sorghum b... 57 1e-05
ref|XP_022682293.1| CHD3-type chromatin-remodeling factor PICKLE... 57 1e-05
>gb|ONK56033.1| uncharacterized protein A4U43_C10F3440 [Asparagus officinalis]
Length = 366
Score = 200 bits (508), Expect = 2e-59
Identities = 109/211 (51%), Positives = 143/211 (67%), Gaps = 3/211 (1%)
Frame = -1
Query: 626 SGRHLDVKMRRSKPRKCSNSSGSAMF--PSGIGKVQVVARRWSNRLKEKSTFEEKSRVKN 453
+G+ ++ RRS K S + P+G + + VA R SNRLKEKS EEKS ++N
Sbjct: 102 NGKVKELVCRRSNRLKQSTLDENICLKNPAGDHEQEEVAFRRSNRLKEKSKLEEKSCLRN 161
Query: 452 STGDLEHVGNPASLSEVVPSILLPTESEAGSVSAHSPPNNY-CRENTDRVMFKTLGTSKG 276
STGDLEH+ +PAS L TESE S SA++P + Y CR++T+R++ + +KG
Sbjct: 162 STGDLEHMEDPASP-------LHSTESEEASDSAYTPSSMYYCRKSTERLIRRN---TKG 211
Query: 275 GDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFHT 96
D KTDE+ +CSS DS+T+ RS G+PCSICQS +GR+FL+QCRNS+CFRTFHT
Sbjct: 212 SDKNQYKTDELLNDCSSDDSSTSSTCIRSDGLPCSICQSTDGRSFLIQCRNSTCFRTFHT 271
Query: 95 YCLHPPLQTIEKDWLCPICNGGSLCGNLATD 3
+CL PPLQTIE DW+CPIC+GGS NLA D
Sbjct: 272 FCLRPPLQTIENDWVCPICHGGSFIKNLAED 302
>ref|XP_020104196.1| chromodomain-helicase-DNA-binding protein 3-like [Ananas comosus]
Length = 1024
Score = 77.4 bits (189), Expect = 8e-13
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -1
Query: 290 GTSKGGDIPYSKTD-EVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSC 114
G K +P S + + + SSGD+ A I +G I CS+C++ N VQC+N+SC
Sbjct: 132 GNLKAACLPVSLEECSISDDESSGDAIEAGICSTNGLI-CSVCETGVASNLFVQCKNASC 190
Query: 113 FRTFHTYCLHPPLQTIEKDWLCPIC 39
FH +CLHPPL+ IE+DW CP+C
Sbjct: 191 CFAFHAFCLHPPLKDIEEDWACPLC 215
>ref|XP_015639963.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling
factor PICKLE [Oryza sativa Japonica Group]
Length = 1150
Score = 68.2 bits (165), Expect = 1e-09
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Frame = -1
Query: 611 DVKMRRSKPRKCSNSSGSAMFPSGIGKVQVVARRWSNRLKEKSTF--------EEKSRVK 456
D+ + S+ +NSS S+ +G +A R S RL+E+ T E++ K
Sbjct: 144 DLGGKESEDDVFANSSSSSQDDAG-----KLASRRSKRLRERLTSDYFDGDVGEDRHPGK 198
Query: 455 NSTGDLEHVGNPASLSEVVPSILLPTESEAGSVSAHSPPNNY----CRENTDRVMFKTLG 288
+S E+ P S+ + + L P + + N CR + R+ K
Sbjct: 199 SSDDYDENCSAPRRGSKRLRNRLGPRNISYADDDSDTDDNRKKIVPCRRTSKRLQEKR-- 256
Query: 287 TSKGGDIPYSKTDEVFRECSSGDSTTACIY-------------RRSGGIPCSICQSVEGR 147
K D+ ++E + E SS +T+ R SGG CSIC+
Sbjct: 257 --KAHDV----SEESYTEASSCMLSTSSSSDDELLHNSIKPGRRNSGGPSCSICKIGIAC 310
Query: 146 NFLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPICNGGS 27
+FL++C+NS+C R+FHT+CL PPLQ I W C C +
Sbjct: 311 SFLIKCKNSTCSRSFHTFCLDPPLQEIIGTWECSWCKSNA 350
>gb|OAY75776.1| CHD3-type chromatin-remodeling factor PICKLE [Ananas comosus]
Length = 1062
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Frame = -1
Query: 251 DEVFRECSSGDSTTACIYRRSGGIPCSICQ-SVEGR-----NFLVQCRNSSCFRTFHTYC 90
D CS G+ AC+ P S+ + S+ G+ N VQC+N+SC FH +C
Sbjct: 187 DTSISNCSEGNLKAACL-------PVSLEECSISGKTGVASNLFVQCKNASCCFAFHAFC 239
Query: 89 LHPPLQTIEKDWLCPIC 39
LHPPL+ IE+DW CP+C
Sbjct: 240 LHPPLKDIEEDWACPLC 256
>dbj|BAS75560.1| Os01g0881000 [Oryza sativa Japonica Group]
Length = 1101
Score = 66.6 bits (161), Expect = 4e-09
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Frame = -1
Query: 611 DVKMRRSKPRKCSNSSGSAMFPSGIGKVQVVARRWSNRLKEKSTFEEKSRVKNSTGDLEH 432
D+ + S+ +NSS S+ +G +A R S RL+E+ T + D E+
Sbjct: 151 DLGGKESEDDVFANSSSSSQDDAG-----KLASRRSKRLRERLT--------SDYFDDEN 197
Query: 431 VGNPASLSEVVPSILLPTESEAGSVSAHSPPNNY----CRENTDRVMFKTLGTSKGGDIP 264
P S+ + + L P + + N CR + R+ K K D+
Sbjct: 198 CSAPRRGSKRLRNRLGPRNISYADDDSDTDDNRKKIVPCRRTSKRLQEKR----KAHDV- 252
Query: 263 YSKTDEVFRECSSGDSTTACIY-------------RRSGGIPCSICQSVEGRNFLVQCRN 123
++E + E SS +T+ R SGG CSIC+ +FL++C+N
Sbjct: 253 ---SEESYTEASSCMLSTSSSSDDELLHNSIKPGRRNSGGPSCSICKIGIACSFLIKCKN 309
Query: 122 SSCFRTFHTYCLHPPLQTIEKDWLCPICNGGS 27
S+C R+FHT+CL PPLQ I W C C +
Sbjct: 310 STCSRSFHTFCLDPPLQEIIGTWECSWCKSNA 341
>gb|EEE55761.1| hypothetical protein OsJ_04298 [Oryza sativa Japonica Group]
Length = 1129
Score = 66.2 bits (160), Expect = 5e-09
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = -1
Query: 197 RRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPICNGGS 27
R SGG CSIC+ +FL++C+NS+C R+FHT+CL PPLQ I W C C +
Sbjct: 297 RNSGGPSCSICKIGIACSFLIKCKNSTCSRSFHTFCLDPPLQEIIGTWECSWCKSNA 353
>dbj|BAD81679.1| putative chromatin remodeling factor CHD3 [Oryza sativa Japonica
Group]
dbj|BAF06910.1| Os01g0881000 [Oryza sativa Japonica Group]
Length = 1150
Score = 66.2 bits (160), Expect = 5e-09
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = -1
Query: 197 RRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPICNGGS 27
R SGG CSIC+ +FL++C+NS+C R+FHT+CL PPLQ I W C C +
Sbjct: 297 RNSGGPSCSICKIGIACSFLIKCKNSTCSRSFHTFCLDPPLQEIIGTWECSWCKSNA 353
>ref|XP_020157969.1| chromodomain-helicase-DNA-binding protein 3-like [Aegilops tauschii
subsp. tauschii]
Length = 1077
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = -1
Query: 191 SGGIPCSICQSVEGRNFLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPIC 39
S G CSIC+S G L+QC+NSSC R+FHT+CL PP+Q CP+C
Sbjct: 173 SSGPICSICESGAGSCLLIQCQNSSCSRSFHTFCLSPPMQDTRGTLECPLC 223
>gb|EEC71901.1| hypothetical protein OsI_04668 [Oryza sativa Indica Group]
Length = 1105
Score = 64.3 bits (155), Expect = 2e-08
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Frame = -1
Query: 611 DVKMRRSKPRKCSNSSGSAMFPSGIGKVQVVARRWSNRLKEKSTF--------EEKSRVK 456
D+ + S+ +NSS S+ +G +A R S RL+E+ T E+K +
Sbjct: 151 DLGGKESEDDVFANSSSSSQDDAG-----KLASRRSKRLRERLTSDYFDGDVGEDKDTLG 205
Query: 455 NSTGDL-EHVGNPASLSEVVPSILLPTESEAGSVSAHSPPNNY----CRENTDRVMFKTL 291
+S+ D E+ P + + + L P + + N CR + R+ K
Sbjct: 206 SSSDDYDENCSAPCRGLKRLRNRLGPRNISYADDDSDTDDNRKKIVPCRRTSKRLQEKRK 265
Query: 290 GTSKGGDIPYSKTDEVFRECSSGD-----STTACIYRRSGGIPCSICQSVEGRNFLVQCR 126
+ + + + SS D ++ R S G CSIC+ +FLV+C+
Sbjct: 266 AHNVSEESYTEASSCMLSTSSSSDDELLHNSIKPGRRNSRGPSCSICKIGIACSFLVKCK 325
Query: 125 NSSCFRTFHTYCLHPPLQTIEKDWLCPICNGGS 27
NS+C R+FHT+CL PPLQ I W C C +
Sbjct: 326 NSTCSRSFHTFCLDPPLQEIIGTWECSWCKSNA 358
>ref|XP_020157961.1| CHD3-type chromatin-remodeling factor PICKLE-like isoform X3
[Aegilops tauschii subsp. tauschii]
Length = 930
Score = 62.4 bits (150), Expect = 1e-07
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -1
Query: 323 ENTDRVMFKTLGTSKGGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRN 144
EN L TSK DE+ R ST S G CSIC+S G
Sbjct: 17 ENCTEASLCILSTSKSS----GSDDELLR------STVKLCKSASSGPTCSICKSGAGSC 66
Query: 143 FLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPIC 39
L+QC+N+SC R+FHT+CL P +Q CP+C
Sbjct: 67 LLIQCQNTSCSRSFHTFCLSPLMQDSRGTLECPLC 101
>ref|XP_020157960.1| CHD3-type chromatin-remodeling factor PICKLE-like isoform X2
[Aegilops tauschii subsp. tauschii]
Length = 934
Score = 62.4 bits (150), Expect = 1e-07
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -1
Query: 323 ENTDRVMFKTLGTSKGGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRN 144
EN L TSK DE+ R ST S G CSIC+S G
Sbjct: 47 ENCTEASLCILSTSKSS----GSDDELLR------STVKLCKSASSGPTCSICKSGAGSC 96
Query: 143 FLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPIC 39
L+QC+N+SC R+FHT+CL P +Q CP+C
Sbjct: 97 LLIQCQNTSCSRSFHTFCLSPLMQDSRGTLECPLC 131
>ref|XP_020157959.1| CHD3-type chromatin-remodeling factor PICKLE-like isoform X1
[Aegilops tauschii subsp. tauschii]
Length = 960
Score = 62.4 bits (150), Expect = 1e-07
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -1
Query: 323 ENTDRVMFKTLGTSKGGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRN 144
EN L TSK DE+ R ST S G CSIC+S G
Sbjct: 47 ENCTEASLCILSTSKSS----GSDDELLR------STVKLCKSASSGPTCSICKSGAGSC 96
Query: 143 FLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPIC 39
L+QC+N+SC R+FHT+CL P +Q CP+C
Sbjct: 97 LLIQCQNTSCSRSFHTFCLSPLMQDSRGTLECPLC 131
>ref|XP_020531736.1| chromodomain-helicase-DNA-binding protein 3 isoform X2 [Amborella
trichopoda]
Length = 1067
Score = 58.2 bits (139), Expect = 3e-06
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -1
Query: 278 GGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFH 99
GG T+E E ++G + + S G C +CQ G + L+ C C +FH
Sbjct: 450 GGAEEVIPTNETTHEFAAGIAFSGS----SDGFICYVCQIDGGNDLLLLCDGDRCELSFH 505
Query: 98 TYCLHPPLQTI-EKDWLCPICNGGS 27
T+CL+PPL + E DWLCP C S
Sbjct: 506 TFCLYPPLPVVPEGDWLCPHCVASS 530
>ref|XP_011628632.2| chromodomain-helicase-DNA-binding protein 3 isoform X1 [Amborella
trichopoda]
gb|ERN19886.1| hypothetical protein AMTR_s00071p00058700 [Amborella trichopoda]
Length = 1360
Score = 58.2 bits (139), Expect = 3e-06
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = -1
Query: 278 GGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFH 99
GG T+E E ++G + + S G C +CQ G + L+ C C +FH
Sbjct: 450 GGAEEVIPTNETTHEFAAGIAFSGS----SDGFICYVCQIDGGNDLLLLCDGDRCELSFH 505
Query: 98 TYCLHPPLQTI-EKDWLCPICNGGS 27
T+CL+PPL + E DWLCP C S
Sbjct: 506 TFCLYPPLPVVPEGDWLCPHCVASS 530
>ref|XP_021312012.1| CHD3-type chromatin-remodeling factor PICKLE [Sorghum bicolor]
Length = 1230
Score = 57.4 bits (137), Expect = 5e-06
Identities = 31/91 (34%), Positives = 48/91 (52%)
Frame = -1
Query: 287 TSKGGDIPYSKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSCFR 108
+S G + DE+ C+S S+T R+GG C IC+S + +++C+NS+C
Sbjct: 309 SSSSGIVDAYSDDELL--CNSVKSST-----RTGGPICLICKSGTASSHIIRCQNSNCSV 361
Query: 107 TFHTYCLHPPLQTIEKDWLCPICNGGSLCGN 15
+FHT+C PPLQ + C +C G N
Sbjct: 362 SFHTFCQDPPLQDATTTFECYLCKMGVSLAN 392
>gb|KXG33813.2| hypothetical protein SORBI_3003G377300 [Sorghum bicolor]
Length = 1152
Score = 56.6 bits (135), Expect = 1e-05
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = -1
Query: 260 SKTDEVFRECSSGDSTTACIYRRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFHTYCLHP 81
S DE+ C+S S+T R+GG C IC+S + +++C+NS+C +FHT+C P
Sbjct: 228 SSDDELL--CNSVKSST-----RTGGPICLICKSGTASSHIIRCQNSNCSVSFHTFCQDP 280
Query: 80 PLQTIEKDWLCPICNGGSLCGN 15
PLQ + C +C G N
Sbjct: 281 PLQDATTTFECYLCKMGVSLAN 302
>ref|XP_022682293.1| CHD3-type chromatin-remodeling factor PICKLE [Setaria italica]
Length = 1238
Score = 56.6 bits (135), Expect = 1e-05
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Frame = -1
Query: 533 KVQVVARRWSNRLKEKSTFE--------EKSRVKNSTGDLEHVGNPASLSE--VVPSILL 384
K ++V +R S RL+ K T E +K+ KNS+ D P S+ + +
Sbjct: 208 KGRIVPKR-SKRLRRKFTSEYANGEVSEDKNSWKNSSDDDNDSAAPRRRSKHHKLRTRSS 266
Query: 383 PTESEAGSVSAHSPPNNY-CRENTDRVMFKTLGTSKGGDIPYSKTDEVFRECSSGDSTTA 207
P + S + + P CR + R+ K + + + SS D
Sbjct: 267 PNDDGDDSDAVNCPGKAIPCRRMSKRLQEKQKVDHISNESSTKASSSMLSTSSSSDDELL 326
Query: 206 C-----IYRRSGGIPCSICQSVEGRNFLVQCRNSSCFRTFHTYCLHPPLQTIEKDWLCPI 42
C R S G CSIC+S + +++C+NS+C R+FH +C PPLQ + C
Sbjct: 327 CNSVKSSKRFSHGPMCSICKSGTASSHIIRCQNSNCSRSFHAFCQDPPLQDGIRTSECSF 386
Query: 41 CNGGSLCGNLATD 3
C +AT+
Sbjct: 387 CKINQTSLAMATE 399