BLASTX nr result

ID: Ophiopogon26_contig00034714 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034714
         (568 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272038.1| uncharacterized protein LOC109847206 [Aspara...    38   3e-07
ref|XP_020262567.1| uncharacterized protein LOC109838548 [Aspara...    37   1e-06

>ref|XP_020272038.1| uncharacterized protein LOC109847206 [Asparagus officinalis]
          Length = 655

 Score = 38.1 bits (87), Expect(3) = 3e-07
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +2

Query: 32  QKKLTGVLISQWESLMNIVSSHHFSHIRDERIWLWIIK 145
           +++LTG  +SQ+ SLMN+++S       D+R WLW +K
Sbjct: 446 KRQLTGTFVSQYFSLMNLLNSICLEQKEDKRKWLWDLK 483



 Score = 33.1 bits (74), Expect(3) = 3e-07
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 220 KLFVPLKVKICICLVVLDKLQTEEAMFRKGVTTHDMMCVC 339
           KL +PLKVK  + L     L T++ + +KG+    + C+C
Sbjct: 509 KLPIPLKVKFLVWLAFRHGLNTKDVLEKKGIQLEKICCLC 548



 Score = 30.0 bits (66), Expect(3) = 3e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 336 VCVMFS*IHNGGTRDHLFLHCQFVSPIWSSIKHNLHI 446
           +C + S +    T  HLF+ C+FV  IW SI   L I
Sbjct: 544 ICCLCSKLEESHT--HLFIKCEFVYSIWRSILFKLKI 578


>ref|XP_020262567.1| uncharacterized protein LOC109838548 [Asparagus officinalis]
          Length = 311

 Score = 37.0 bits (84), Expect(3) = 1e-06
 Identities = 15/38 (39%), Positives = 26/38 (68%)
 Frame = +2

Query: 38  KLTGVLISQWESLMNIVSSHHFSHIRDERIWLWIIKEF 151
           +LTG L+ Q+ +++NI++S  F+   D+R WLW   +F
Sbjct: 71  QLTGDLVFQYFNMLNIINSVSFNDYEDKREWLWEANKF 108



 Score = 32.0 bits (71), Expect(3) = 1e-06
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 220 KLFVPLKVKICICLVVLDKLQTEEAMFRKGVTTHDMMCVC 339
           +L +PLKVK  + L + + L T + + +KG+      C+C
Sbjct: 132 ELTIPLKVKFVVWLALRNGLNTTDILAKKGIILQRTCCLC 171



 Score = 30.0 bits (66), Expect(3) = 1e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 333 CVCVMFS*IHNGGTRDHLFLHCQFVSPIWSSIKHNLH 443
           C+C      H+     HLFL C+FV  IW S++  L+
Sbjct: 169 CLCTKSDEDHS-----HLFLKCEFVYSIWRSLQFKLN 200


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