BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034712
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]     55   4e-06
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     55   5e-06

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -2

Query: 412 GLSEKSKILFEALSQGNFMMKSEDDAWDFLEGFADKTHQWEGFTTVFETIRKDERG--QL 239
           GL   SK   E++ QG+FM K+ D+AW+FLE  ++KT QWE       ++ + +     L
Sbjct: 171 GLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQSKSSGLSL 230

Query: 238 ERVVAAEERLLALIETLD 185
           E  +A+E ++  ++  L+
Sbjct: 231 ESNIASEAKMATILRRLE 248


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -2

Query: 412 GLSEKSKILFEALSQGNFMMKSEDDAWDFLEGFADKTHQWEGFTTVFETIRKDERG--QL 239
           GL   SK   E++ QG+FM K+ D+AW+FLE  ++KT QWE       ++ + +     L
Sbjct: 103 GLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQSKSSGLSL 162

Query: 238 ERVVAAEERLLALIETLD 185
           E  +A+E ++  ++  L+
Sbjct: 163 ESNIASEAKMATILRRLE 180