BLASTX nr result

ID: Ophiopogon26_contig00034693 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034693
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020276261.1| SHUGOSHIN 2-like [Asparagus officinalis] >gi...    85   7e-17
ref|XP_010935696.1| PREDICTED: shugoshin-1 [Elaeis guineensis]         55   2e-06

>ref|XP_020276261.1| SHUGOSHIN 2-like [Asparagus officinalis]
 gb|ONK79513.1| uncharacterized protein A4U43_C01F7120 [Asparagus officinalis]
          Length = 383

 Score = 84.7 bits (208), Expect = 7e-17
 Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
 Frame = +1

Query: 1   RKSSRRRSN-NLTSEAHESKDNLPEVENVK--ACPVIIEPLNEDNPAQVKSSATVRNQIE 171
           RKSSRRRSN N TSE  ESKDNL ++ENV+  +CPVI EP  +DNP Q  SSATV  +IE
Sbjct: 224 RKSSRRRSNINFTSEERESKDNLLDIENVEVPSCPVISEPPIKDNPVQSNSSATVTCRIE 283

Query: 172 AVERDVARTGKSSRRRFNNLTSEARESKDNLPVVENVEVPACPVISE-------LPNEDN 330
             E    R  +SSR+R NN  SE  +SK++    E  ++ A   I +        PN D 
Sbjct: 284 PEEEVGTRVRRSSRKRANNQKSE--QSKEHF--AETADIRARSPIPDPEERSLPPPNSDA 339

Query: 331 PVQAKSS 351
           P++ + S
Sbjct: 340 PLKHEES 346



 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
 Frame = +1

Query: 142 SSATVRNQIEAVERDVARTGKSSRRRFN-NLTSEARESKDNLPVVENVEVPACPVISELP 318
           S+AT+ +Q+EA ++D  R  KSSRRR N N TSE RESKDNL  +ENVEVP+CPVISE P
Sbjct: 207 SAATLTHQVEAKDKDTRR--KSSRRRSNINFTSEERESKDNLLDIENVEVPSCPVISEPP 264

Query: 319 NEDNPVQAKSS 351
            +DNPVQ+ SS
Sbjct: 265 IKDNPVQSNSS 275


>ref|XP_010935696.1| PREDICTED: shugoshin-1 [Elaeis guineensis]
          Length = 418

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
 Frame = +1

Query: 1   RKSSRRRSNNLTSEAHESKDNLPEVENVKACPV---IIEPLNEDNPAQVKSSA---TVRN 162
           R+S RRRS +L SE+ E   +L ++E+ K  PV   + EPL+E    Q    A   T   
Sbjct: 234 RRSLRRRSGDLKSESCEPMVDLIKIEDAKV-PVHSLVSEPLHEGTSVQADIPAQGSTAMT 292

Query: 163 QIEAVERDVARTGKSSRRRFNNLTSEARESKDNLPVVENVEVPACPVISELPNEDNPVQ 339
             E   ++     +S RRR  NL SE+ E   +L  +E+ +VP   ++SE  +ED  VQ
Sbjct: 293 HEEVAPKEKVDRRRSLRRRSGNLKSESCEPMVDLIKIEDAKVPVHSLVSEPLHEDTSVQ 351


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