BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034504
         (535 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009393173.2| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
ref|XP_010941590.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_020256176.1| pentatricopeptide repeat-containing protein ...    56   7e-06

>ref|XP_009393173.2| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 415

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
 Frame = -1

Query: 217 CKPSSASLFEAEPLQCRLHSDS-ALQLFDKMQRRLCNNSTTI-----------GRVSKGM 74
           C+P++ +        C     S AL+L D+MQ+  C+  T             GRVS+GM
Sbjct: 260 CRPNATTYSTIMHYLCEHDKVSEALELCDRMQKNGCHPDTITFNILISGLCKQGRVSEGM 319

Query: 73  ELLKAMQLKGCYPNSGTY*ALLY 5
           E LK M+LKGCYPNSGTY ALLY
Sbjct: 320 EFLKTMKLKGCYPNSGTYQALLY 342


>ref|XP_010941590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Elaeis guineensis]
 ref|XP_010941591.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Elaeis guineensis]
          Length = 383

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 12/83 (14%)
 Frame = -1

Query: 217 CKPSSASLFEAEPLQCRLHSDS-ALQLFDKMQRRLCNNSTTI-----------GRVSKGM 74
           C+P++ +        C+    S A +L ++M++  C+  T             G+V+KGM
Sbjct: 228 CRPNATTYSTLMHALCKDDKPSEAFELCERMEKEGCHPDTITFNILISGLCKQGQVAKGM 287

Query: 73  ELLKAMQLKGCYPNSGTY*ALLY 5
           ELLK M+LKGCYPNSGT  ALLY
Sbjct: 288 ELLKTMKLKGCYPNSGTNQALLY 310


>ref|XP_020256176.1| pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Asparagus officinalis]
 ref|XP_020256177.1| pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Asparagus officinalis]
 ref|XP_020256178.1| pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Asparagus officinalis]
 gb|ONK74402.1| uncharacterized protein A4U43_C03F5850 [Asparagus officinalis]
          Length = 404

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 11/62 (17%)
 Frame = -1

Query: 157 DSALQLFDKMQRRLCNNSTTI-----------GRVSKGMELLKAMQLKGCYPNSGTY*AL 11
           D A +L D+M+R  C   T +            RV +G+ELLK M+LKGCYPNSG+Y AL
Sbjct: 249 DEAFELCDRMEREKCYPDTVMFNVLISGLCKQRRVREGIELLKGMKLKGCYPNSGSYQAL 308

Query: 10  LY 5
           +Y
Sbjct: 309 VY 310