BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034463
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposo...   114   2e-28
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    110   7e-28
gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]      99   1e-27
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen...    99   1e-27
gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposo...   107   3e-27
gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondr...   105   1e-26
emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]        106   1e-26
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   108   3e-26
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...   107   1e-25
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]    97   1e-25
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   107   2e-25
gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]   105   3e-25
gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]   103   1e-24
gb|OAY27695.1| hypothetical protein MANES_15G008200 [Manihot esc...    99   3e-24
gb|KYP38865.1| Retrovirus-related Pol polyprotein from transposo...   101   8e-24
emb|CAN61091.1| hypothetical protein VITISV_043152 [Vitis vinifera]   101   8e-24
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...    99   9e-24
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...    99   9e-24
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...    99   9e-24
gb|AJE29370.1| putative gag protein [Coffea canephora]                 96   2e-23

>gb|PKA57601.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 249

 Score =  114 bits (285), Expect = 2e-28
 Identities = 59/119 (49%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
 Frame = -1

Query: 353 HLQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTK 174
           H    +     MTDE+W E DLKA STIQLCLADEV+YN+ D +++  LW +L+  YM+K
Sbjct: 90  HALLERKNARKMTDEEWKELDLKALSTIQLCLADEVLYNISDVETSVDLWRKLEKFYMSK 149

Query: 173 NYFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKADE-DKALIFLSSLPE 3
           +  NKLY K  LY LRM EGA +LEH+N  +K+I +  +++ K  E D  L+FLS LP+
Sbjct: 150 SLTNKLYMKRQLYNLRMSEGANLLEHMNVFSKMISQFHSIEVKLQEKDVILLFLSLLPK 208


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  110 bits (274), Expect(2) = 7e-28
 Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+  KPESM  EDW E D KAAS I+L L D+V+ N++DE+SA G+W +L+ LYM+K 
Sbjct: 38  LGGKSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACGIWTKLENLYMSKT 97

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKIIELLA-VDTK-ADEDKALIFLSSLP 6
             NKLY K  LY L M EG   L HLN LN +I  LA +  K  +EDK ++ L+SLP
Sbjct: 98  LTNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVKIEEEDKRIVLLNSLP 154



 Score = 41.6 bits (96), Expect(2) = 7e-28
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = -3

Query: 429 FDG-KGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           F+G K  F +WQ+R+K LL+QQGLHK   GK  K
Sbjct: 11  FNGDKPVFSMWQRRMKDLLIQQGLHKALGGKSKK 44


>gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]
          Length = 1371

 Score = 99.0 bits (245), Expect(2) = 1e-27
 Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L+G+ AKP  M+DEDW E + +  STI+L +AD ++ NV + DSA  LW +++ L++ K 
Sbjct: 230 LKGKDAKPVKMSDEDWEELESRCVSTIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKG 289

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKIIELLA-VDTK-ADEDKALIFLSSLPE 3
              KL  K  LY L+M EGA+++EH+N    +++ LA VD K  +ED+AL+ L+SLP+
Sbjct: 290 LQTKLNLKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPD 347



 Score = 52.0 bits (123), Expect(2) = 1e-27
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           FDGKGNF LWQ+RVK +LVQQGL K   GK++K
Sbjct: 204 FDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAK 236


>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 460

 Score = 99.0 bits (245), Expect(2) = 1e-27
 Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L+G+ AKP  M+DEDW E + +  STI+L +AD ++ NV + DSA  LW +++ L++ K 
Sbjct: 40  LKGKDAKPVKMSDEDWEELESRCVSTIRLYIADNIINNVNNVDSATQLWEKMEKLHLGKG 99

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKIIELLA-VDTK-ADEDKALIFLSSLPE 3
              KL  K  LY L+M EGA+++EH+N    +++ LA VD K  +ED+AL+ L+SLP+
Sbjct: 100 LQTKLNLKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPD 157



 Score = 52.0 bits (123), Expect(2) = 1e-27
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           FDGKGNF LWQ+RVK +LVQQGL K   GK++K
Sbjct: 14  FDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAK 46


>gb|PKA58053.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 198

 Score =  107 bits (266), Expect(2) = 3e-27
 Identities = 59/118 (50%), Positives = 82/118 (69%), Gaps = 2/118 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L GR+ K   +T+E+  E  LKA+STIQLCLADEV+YN+ D +++  LW +L+  YM+K+
Sbjct: 37  LLGRE-KARKITNEECEELYLKASSTIQLCLADEVLYNIFDVETSVDLWRKLEKFYMSKS 95

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTK-ADEDKALIFLSSLPE 3
             NKLY K  LY LRM E A +LEH+N  +KII +  ++D K  +EDK L+ LS LP+
Sbjct: 96  LTNKLYMKRQLYSLRMSEEADLLEHMNIFSKIISQFHSIDVKLEEEDKTLLLLSLLPK 153



 Score = 42.4 bits (98), Expect(2) = 3e-27
 Identities = 17/31 (54%), Positives = 24/31 (77%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKE 337
           F+GK +FG+WQ+RVKA+LVQ  L+    G+E
Sbjct: 11  FNGKKDFGIWQRRVKAILVQNDLYHALLGRE 41


>gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
           glauca]
          Length = 116

 Score =  105 bits (263), Expect = 1e-26
 Identities = 52/108 (48%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 MTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLYSKN* 141
           M++EDW E D+KA S+I++CLAD  ++NV  E +A GLW +L++LY +K+  N++  KN 
Sbjct: 1   MSNEDWEEMDMKAVSSIRMCLADNFIFNVRGEKTASGLWAKLESLYQSKSLLNRILLKNR 60

Query: 140 LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLPE 3
           LY L+M+EGA V EHLN  N I+ +L ++  K  DEDKA+  L +LP+
Sbjct: 61  LYSLKMKEGAKVSEHLNTFNDILSQLESIGVKMDDEDKAVTLLCTLPD 108


>emb|CAE04897.3| OSJNBa0042I15.19 [Oryza sativa Japonica Group]
          Length = 478

 Score =  106 bits (264), Expect(2) = 1e-26
 Identities = 53/112 (47%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
 Frame = -1

Query: 332 KPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLY 153
           KP  M D+D  E  L+AA+TI+ CL+D++MY+VM+E S   +W +L+A +M+K   NK Y
Sbjct: 125 KPAKMEDDDCEEMQLQAAATIRRCLSDQIMYHVMEETSPKIIWEKLEAQFMSKTLTNKRY 184

Query: 152 SKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLPE 3
            K  LYGL+MQEGA +  H+N  N+++ +L+ +D +  DEDKA++ L SLPE
Sbjct: 185 LKQKLYGLKMQEGADLTAHVNVFNQLVTDLVKMDVEVDDEDKAIVLLCSLPE 236



 Score = 41.6 bits (96), Expect(2) = 1e-26
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAG 343
           FDG GNFGLWQ RVK LL QQ + K   G
Sbjct: 95  FDGFGNFGLWQTRVKDLLAQQEVSKALKG 123


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score =  108 bits (271), Expect(2) = 3e-26
 Identities = 57/111 (51%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = -1

Query: 332 KPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLY 153
           KP++M  EDWA+ D +AAS I+L L+D+V+ N++DED+A G+W RL++LYM+K   NKLY
Sbjct: 43  KPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLY 102

Query: 152 SKN*LYGLRMQEGAAVLEHLNFLNKIIELLA-VDTK-ADEDKALIFLSSLP 6
            K  LY L M EG   L HLN  N +I  LA +  K  +EDKA++ L+SLP
Sbjct: 103 LKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLP 153



 Score = 37.4 bits (85), Expect(2) = 3e-26
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHK 355
           F+G   F  WQ+R++ LL+QQGLHK
Sbjct: 11  FNGDNGFSTWQRRMRDLLIQQGLHK 35


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score =  107 bits (267), Expect = 1e-25
 Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+  KP +MTDE W E D KA S IQLCL+ EV+  V +E +A  LWL+L++LYMTK+
Sbjct: 14  LDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKS 73

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLP 6
             NKL  K  LY +RM EG  +  HLN  N II +L  ++ K  DEDKA++ + SLP
Sbjct: 74  LANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLP 130


>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
          Length = 127

 Score = 97.4 bits (241), Expect(2) = 1e-25
 Identities = 43/84 (51%), Positives = 63/84 (75%)
 Frame = -1

Query: 332 KPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLY 153
           +PE M + DW + ++K A+TI+LCLAD+VMY+VMDE+S   +WL+L++ YM+K   NKLY
Sbjct: 44  QPEGMNNMDWKDLEVKVAATIRLCLADDVMYHVMDEESPTAIWLKLESQYMSKLLTNKLY 103

Query: 152 SKN*LYGLRMQEGAAVLEHLNFLN 81
            K  LYGL+M EG+ + +H+N  N
Sbjct: 104 LKQKLYGLKMAEGSDLSQHINVFN 127



 Score = 46.6 bits (109), Expect(2) = 1e-25
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKE 337
           FDG GNF LWQ+RVK LLVQQG+ K   GK+
Sbjct: 14  FDGFGNFDLWQRRVKDLLVQQGMVKALYGKQ 44


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  107 bits (267), Expect(2) = 2e-25
 Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+  KP +MTDE W E D KA S IQLCL+ EV+  V +E +A  LWL+L++LYMTK+
Sbjct: 38  LDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAALWLKLESLYMTKS 97

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLP 6
             NKL  K  LY +RM EG  +  HLN  N II +L  ++ K  DEDKA++ + SLP
Sbjct: 98  LANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDEDKAVLLIVSLP 154



 Score = 36.2 bits (82), Expect(2) = 2e-25
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           FDGK  F +W+ ++KA+L Q GL K   GK  K
Sbjct: 12  FDGKICFSIWKVQMKAVLTQNGLKKALDGKAKK 44


>gb|PHT53674.1| hypothetical protein CQW23_08136 [Capsicum baccatum]
          Length = 707

 Score =  105 bits (263), Expect(2) = 3e-25
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+ AKP + T+E W E D KA STIQLCL+ EV+  V++E +A G+W +L++LYMTK+
Sbjct: 36  LSGKSAKPATTTEEQWEETDEKALSTIQLCLSREVLREVINEKTAAGIWSKLESLYMTKS 95

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNK-IIELLAVDTKA-DEDKALIFLSSLP 6
             NKL  K  L+ LRM EG  +  HL   N  II+L  +D +  DEDKA++ + SLP
Sbjct: 96  LANKLRLKERLFTLRMSEGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLP 152



 Score = 37.0 bits (84), Expect(2) = 3e-25
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           FDGK +F +W+ ++ A+L Q GL K  +GK +K
Sbjct: 10  FDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAK 42


>gb|PHT55765.1| hypothetical protein CQW23_04251 [Capsicum baccatum]
          Length = 553

 Score =  103 bits (258), Expect(2) = 1e-24
 Identities = 56/117 (47%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+ AKP + T+E W E D KA S IQLCL+ EV+  V++E +A G+W +L++LYMTK+
Sbjct: 36  LSGKSAKPATTTEEQWEEMDEKALSIIQLCLSREVLREVINEKTAAGIWSKLESLYMTKS 95

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNK-IIELLAVDTKA-DEDKALIFLSSLP 6
             NKL  K  L+ LRM EG  +  HL   N  II+L  +D +  DEDKA++ + SLP
Sbjct: 96  LANKLRLKERLFTLRMSEGTPIQSHLGEFNSIIIDLENLDVEIDDEDKAVLLIVSLP 152



 Score = 37.0 bits (84), Expect(2) = 1e-24
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           FDGK +F +W+ ++ A+L Q GL K  +GK +K
Sbjct: 10  FDGKISFAIWRVQMLAVLTQNGLKKVLSGKSAK 42


>gb|OAY27695.1| hypothetical protein MANES_15G008200 [Manihot esculenta]
          Length = 109

 Score = 99.4 bits (246), Expect = 3e-24
 Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
 Frame = -1

Query: 320 MTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLYSKN* 141
           M+D D  E + K    IQLC+AD ++ NV+DEDSA  +W +L+ LYM+K+ FNKLY K  
Sbjct: 1   MSDADLDEFEEKCVRIIQLCIADNIVNNVIDEDSAMDIWEKLEKLYMSKSLFNKLYLKCK 60

Query: 140 LYGLRMQEGAAVLEHLNFLNKIIELLA-VDTK-ADEDKALIFLSSL 9
           LY L+M EG  ++EHLN  N+I+  LA VD K   +DKAL+FL SL
Sbjct: 61  LYQLKMVEGGNLVEHLNEFNRILNQLAKVDVKIKKKDKALLFLGSL 106


>gb|KYP38865.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP38876.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 212

 Score =  101 bits (251), Expect = 8e-24
 Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
 Frame = -1

Query: 332 KPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLY 153
           K  S+  ED AEQ+ KA S I L L+DEV+Y V D+++A GLWL+L+ LYMTK+  NKL 
Sbjct: 30  KSTSIKKEDLAEQEEKAHSLILLSLSDEVLYEVADQETACGLWLKLEKLYMTKSVCNKLM 89

Query: 152 SKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTK-ADEDKALIFLSSLP 6
            K  L+GL M+E  ++ EHL+  N I+ EL  +D K  DED A+I L+SLP
Sbjct: 90  LKRRLFGLHMKESTSLKEHLDEFNSILMELRDIDVKIEDEDSAMILLASLP 140


>emb|CAN61091.1| hypothetical protein VITISV_043152 [Vitis vinifera]
          Length = 229

 Score =  101 bits (252), Expect = 8e-24
 Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -1

Query: 320 MTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLYSKN* 141
           M D DW + + K A TI+L L D+VMY+VMDE+S    WL+L++ YM+K   NKLY K  
Sbjct: 1   MNDMDWKDLEAKVAKTIRLYLDDDVMYHVMDEESPTTNWLKLESRYMSKLLRNKLYLKQK 60

Query: 140 LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTK-ADEDKALIFLSSLP 6
           LYGL+M EG+ + +++N LN II +L  +D K  DEDKAL+ L+SLP
Sbjct: 61  LYGLKMVEGSNLSQYINVLNHIISDLKQIDVKFEDEDKALMLLNSLP 107


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score = 98.6 bits (244), Expect(2) = 9e-24
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+   P ++++E   +   +A S I LCL DEV+  V DE +A GLWLRL++ YMTK+
Sbjct: 540 LSGKDKLPSTLSEEQKDDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKS 599

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLP 6
             N+LY K  LY L+M+EG  V +HL+  N II +L  +D K  DED+A+I L SLP
Sbjct: 600 LTNRLYLKQRLYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLP 656



 Score = 39.3 bits (90), Expect(2) = 9e-24
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKE 337
           F GK +F LW+ +++A+LVQQGL K  +GK+
Sbjct: 514 FTGKNSFSLWRIKMRAVLVQQGLLKALSGKD 544


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score = 98.6 bits (244), Expect(2) = 9e-24
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKN 171
           L G+   P ++++E   +   +A S I LCL DEV+  V DE +A GLWLRL++ YMTK+
Sbjct: 561 LSGKDKLPSTLSEEQKDDMLERAHSAILLCLGDEVLREVADEKTASGLWLRLESKYMTKS 620

Query: 170 YFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKII-ELLAVDTKA-DEDKALIFLSSLP 6
             N+LY K  LY L+M+EG  V +HL+  N II +L  +D K  DED+A+I L SLP
Sbjct: 621 LTNRLYLKQRLYALKMEEGTPVSQHLDKFNSIIMDLNNIDNKIDDEDQAIIVLCSLP 677



 Score = 39.3 bits (90), Expect(2) = 9e-24
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKE 337
           F GK +F LW+ +++A+LVQQGL K  +GK+
Sbjct: 535 FTGKNSFSLWRIKMRAVLVQQGLLKALSGKD 565


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score = 98.6 bits (244), Expect(2) = 9e-24
 Identities = 51/110 (46%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
 Frame = -1

Query: 329 PESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDEDSAPGLWLRLKALYMTKNYFNKLYS 150
           PE M    W E   +AA+TI+L L+D VMY VMDE ++  +W++L +LYM+K+  +KLY 
Sbjct: 45  PEKMDAGKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKEIWVKLTSLYMSKSLTSKLYL 104

Query: 149 KN*LYGLRMQEGAAVLEHLNFLNK-IIELLAVDTKA-DEDKALIFLSSLP 6
           K  LYGL+MQE + + +H++  N+ +++L  +D K  DEDKA+I L SLP
Sbjct: 105 KQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLP 154



 Score = 39.3 bits (90), Expect(2) = 9e-24
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHK 355
           FDG GNF LWQ R+K LL QQG+ K
Sbjct: 14  FDGTGNFVLWQMRLKDLLAQQGISK 38


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score = 95.9 bits (237), Expect(2) = 2e-23
 Identities = 51/120 (42%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
 Frame = -1

Query: 350 LQGRKAKPESMTDEDWAEQDLKAASTIQLCLADEVMYNVMDE-DSAPGLWLRLKALYMTK 174
           L G+  KPESM D+++ E D + ASTI+L +AD ++ NV+DE DSA  LW +L+ LY+ K
Sbjct: 39  LNGKNKKPESMNDDEFEELDARCASTIRLYVADNIINNVIDEKDSAADLWKKLEKLYLAK 98

Query: 173 NYFNKLYSKN*LYGLRMQEGAAVLEHLNFLNKIIELL---AVDTKADEDKALIFLSSLPE 3
           +  NKL+ K   Y L+M EG ++++H+N  N I++ L    VD + +E+KAL+ L+ + +
Sbjct: 99  SLSNKLHLKRQFYALKMVEGGSLMDHMNTFNGILDQLQKVGVDIE-EENKALLLLTPVSD 157



 Score = 41.2 bits (95), Expect(2) = 2e-23
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -3

Query: 429 FDGKGNFGLWQKRVKALLVQQGLHKTFAGKESK 331
           F+G  +F LWQ+RVK +LVQQGL K   GK  K
Sbjct: 13  FNGTTSFTLWQRRVKDVLVQQGLAKALNGKNKK 45