BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034418
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp...   223   4e-65
ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus...   186   5e-52
gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]         186   6e-52
gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [...   180   4e-51
gb|KDO60787.1| hypothetical protein CISIN_1g0025862mg [Citrus si...   180   6e-51
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme...   182   2e-50
gb|KDO60785.1| hypothetical protein CISIN_1g0025862mg [Citrus si...   180   2e-50
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       176   3e-50
dbj|GAY56544.1| hypothetical protein CUMW_172710 [Citrus unshiu]      180   5e-50
ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus...   180   6e-50
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1 is...   180   9e-50
ref|XP_015382841.1| PREDICTED: RNA-dependent RNA polymerase 1 is...   180   9e-50
ref|XP_021665118.1| probable RNA-dependent RNA polymerase 1, par...   179   2e-49
ref|XP_021665155.1| RNA-dependent RNA polymerase 1-like isoform ...   179   2e-49
ref|XP_021665154.1| RNA-dependent RNA polymerase 1-like isoform ...   179   2e-49
ref|XP_021647480.1| RNA-dependent RNA polymerase 1-like, partial...   179   2e-49
gb|AQK74661.1| Putative RNA-dependent RNA polymerase [Zea mays]       178   3e-49
ref|XP_008644240.1| putative RNA-dependent RNA polymerase isofor...   178   3e-49
ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea m...   178   3e-49
gb|KFK23820.1| hypothetical protein AALP_AAs48810U000100, partia...   167   4e-49

>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
 ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
 gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
          Length = 1128

 Score =  223 bits (569), Expect = 4e-65
 Identities = 109/135 (80%), Positives = 122/135 (90%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIADAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDNF 227
           DQY+ Y KSNIQPPSP I+D GLVYIHRVQITPSKVYF+GPEINVSN VIRHYSEDIDNF
Sbjct: 345 DQYVAYKKSNIQPPSPEISDTGLVYIHRVQITPSKVYFFGPEINVSNRVIRHYSEDIDNF 404

Query: 226 IRVSFVEEDCGKIYSADLAPRSVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSASQLR 47
           IRVSFVEED GKI S+DLAPRS +E RTK+Y+RIL++L+NGI I DK+FEFLAFS+SQLR
Sbjct: 405 IRVSFVEEDSGKIRSSDLAPRSSDEKRTKIYKRILNVLKNGIIIGDKKFEFLAFSSSQLR 464

Query: 46  DNSAWMFASRRGLTA 2
           DNSAWMFAS+  LTA
Sbjct: 465 DNSAWMFASKGALTA 479


>ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
          Length = 890

 Score =  186 bits (471), Expect = 5e-52
 Identities = 93/139 (66%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           +QY  YI S   P SPAI+ D+GLVY+HRVQITP KVYF GPEINVSN V+RHY EDIDN
Sbjct: 348 EQYRNYITSRYPPKSPAISLDSGLVYVHRVQITPCKVYFCGPEINVSNRVLRHYLEDIDN 407

Query: 229 FIRVSFVEEDCGKIYSADLAPRSVN---EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+E+  K+YS DL+PR+ +   + RT +Y+RIL ILRNG+ I DK+FEFLAFS+
Sbjct: 408 FLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKKFEFLAFSS 467

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR+GL A
Sbjct: 468 SQLRENSLWMFASRKGLNA 486


>gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 917

 Score =  186 bits (471), Expect = 6e-52
 Identities = 93/139 (66%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           +QY  YI S   P SPAI+ D+GLVY+HRVQITP KVYF GPEINVSN V+RHY EDIDN
Sbjct: 375 EQYRNYITSRYPPKSPAISLDSGLVYVHRVQITPCKVYFCGPEINVSNRVLRHYLEDIDN 434

Query: 229 FIRVSFVEEDCGKIYSADLAPRSVN---EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+E+  K+YS DL+PR+ +   + RT +Y+RIL ILRNG+ I DK+FEFLAFS+
Sbjct: 435 FLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKKFEFLAFSS 494

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR+GL A
Sbjct: 495 SQLRENSLWMFASRKGLNA 513


>gb|KDO60788.1| hypothetical protein CISIN_1g0025862mg, partial [Citrus sinensis]
          Length = 579

 Score =  180 bits (456), Expect = 4e-51
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 117 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 176

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 177 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 236

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 237 SQLRESSAWMFASRYGLTA 255


>gb|KDO60787.1| hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
          Length = 607

 Score =  180 bits (456), Expect = 6e-51
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 117 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 176

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 177 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 236

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 237 SQLRESSAWMFASRYGLTA 255


>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera]
 ref|XP_008812978.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera]
          Length = 1131

 Score =  182 bits (461), Expect = 2e-50
 Identities = 92/138 (66%), Positives = 114/138 (82%), Gaps = 4/138 (2%)
 Frame = -1

Query: 403 QYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDNF 227
           +Y++  +S   P SP+I+ DAGLVY++RVQ+TPSKVYFYGPE+NVSN V+RH+SEDI+NF
Sbjct: 343 KYLKLKRSLRLPKSPSISLDAGLVYVYRVQVTPSKVYFYGPEVNVSNRVVRHFSEDIENF 402

Query: 226 IRVSFVEEDCGKIYSADLAPRS---VNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSAS 56
           +RVSFV+ED  K++S DL+ RS    NEM T LYRRIL +LRNGI I DK+FEFLAFS+S
Sbjct: 403 VRVSFVDEDWEKMHSTDLSSRSGSAGNEMHTALYRRILSVLRNGITIGDKKFEFLAFSSS 462

Query: 55  QLRDNSAWMFASRRGLTA 2
           QLR+NSAWMFAS   LTA
Sbjct: 463 QLRENSAWMFASNERLTA 480


>gb|KDO60785.1| hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
 gb|KDO60786.1| hypothetical protein CISIN_1g0025862mg [Citrus sinensis]
          Length = 724

 Score =  180 bits (456), Expect = 2e-50
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 234 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 293

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 294 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 353

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 354 SQLRESSAWMFASRYGLTA 372


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  176 bits (445), Expect = 3e-50
 Identities = 91/138 (65%), Positives = 107/138 (77%), Gaps = 3/138 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           +QY EY+K    P SP+I  D GLVY+ RV +TP KVYF GPE+NVSN V+R+YSEDIDN
Sbjct: 331 EQYDEYLKRRQLPKSPSITLDDGLVYVRRVVVTPCKVYFSGPEVNVSNRVLRNYSEDIDN 390

Query: 229 FIRVSFVEEDCGKIYSADLAPRSV--NEMRTKLYRRILDILRNGIAIDDKRFEFLAFSAS 56
           F+RVSFV+E+  KI+S DL PR+   N MRT +Y RIL  LRNG  I DK+FEFLAFS+S
Sbjct: 391 FLRVSFVDEEWEKIHSTDLLPRASTGNGMRTDIYLRILSTLRNGFVIGDKKFEFLAFSSS 450

Query: 55  QLRDNSAWMFASRRGLTA 2
           QLRDNS WMFASR GLTA
Sbjct: 451 QLRDNSVWMFASRPGLTA 468


>dbj|GAY56544.1| hypothetical protein CUMW_172710 [Citrus unshiu]
          Length = 835

 Score =  180 bits (456), Expect = 5e-50
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 345 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 404

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 405 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 464

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 465 SQLRESSAWMFASRYGLTA 483


>ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
 gb|POE91878.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 1131

 Score =  180 bits (457), Expect = 6e-50
 Identities = 92/139 (66%), Positives = 111/139 (79%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           +QY +YI S   P SPAI+ D GLVY+ RVQITP KVYF GPEINVSN V+R+Y EDIDN
Sbjct: 341 EQYRKYITSRYPPKSPAISLDTGLVYVRRVQITPCKVYFCGPEINVSNRVLRNYPEDIDN 400

Query: 229 FIRVSFVEEDCGKIYSADLAPRSVN---EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+E+  K+YS DL+PR+ +   + RT +Y+RIL ILRNGI I DK+FEFLAFS+
Sbjct: 401 FLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGIVIGDKKFEFLAFSS 460

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR GL A
Sbjct: 461 SQLRENSLWMFASREGLNA 479


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
           sinensis]
 ref|XP_015382842.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus
           sinensis]
 ref|XP_024046337.1| RNA-dependent RNA polymerase 1 [Citrus clementina]
 ref|XP_024046338.1| RNA-dependent RNA polymerase 1 [Citrus clementina]
          Length = 1132

 Score =  180 bits (456), Expect = 9e-50
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 345 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 404

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 405 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 464

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 465 SQLRESSAWMFASRYGLTA 483


>ref|XP_015382841.1| PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus
           sinensis]
          Length = 1138

 Score =  180 bits (456), Expect = 9e-50
 Identities = 89/139 (64%), Positives = 113/139 (81%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +Y+ S  +P SPAI+ D GLVY+HRVQ+TPS+VYF GPEINVSN V+RH+  DIDN
Sbjct: 351 DQYRKYMTSRSKPSSPAISLDDGLVYVHRVQVTPSRVYFCGPEINVSNRVLRHFRRDIDN 410

Query: 229 FIRVSFVEEDCGKIYSADLAPR---SVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+R+SF++ED  KI+S DL+PR   + +  RT++Y RIL  LRNGI I D++FEFLAFS+
Sbjct: 411 FLRISFIDEDLDKIHSTDLSPRGSSATDITRTRIYTRILSTLRNGILIGDRKFEFLAFSS 470

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR++SAWMFASR GLTA
Sbjct: 471 SQLRESSAWMFASRYGLTA 489


>ref|XP_021665118.1| probable RNA-dependent RNA polymerase 1, partial [Hevea
           brasiliensis]
          Length = 1070

 Score =  179 bits (453), Expect = 2e-49
 Identities = 92/139 (66%), Positives = 111/139 (79%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +YI S   P  PA+A D GLVY+HRVQITP+KVYF GPE+N+SN V+R+Y +DI N
Sbjct: 280 DQYTKYITSGRLPEPPAVALDDGLVYVHRVQITPAKVYFCGPEVNLSNRVLRNYPDDIKN 339

Query: 229 FIRVSFVEEDCGKIYSADLAPR--SVN-EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+ED  ++YS +L+PR  SVN E RTK+Y RIL ILRNGI I +K+FEFL FS 
Sbjct: 340 FLRVSFVDEDLDRLYSTNLSPRTSSVNEERRTKIYERILSILRNGIVIGEKKFEFLGFSQ 399

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR GLTA
Sbjct: 400 SQLRENSVWMFASRPGLTA 418


>ref|XP_021665155.1| RNA-dependent RNA polymerase 1-like isoform X2 [Hevea brasiliensis]
          Length = 1122

 Score =  179 bits (453), Expect = 2e-49
 Identities = 92/139 (66%), Positives = 111/139 (79%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +YI S   P  PA+A D GLVY+HRVQITP+KVYF GPE+N+SN V+R+Y +DI N
Sbjct: 332 DQYTKYITSGRLPEPPAVALDDGLVYVHRVQITPAKVYFCGPEVNLSNRVLRNYPDDIKN 391

Query: 229 FIRVSFVEEDCGKIYSADLAPR--SVN-EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+ED  ++YS +L+PR  SVN E RTK+Y RIL ILRNGI I +K+FEFL FS 
Sbjct: 392 FLRVSFVDEDLDRLYSTNLSPRTSSVNEERRTKIYERILSILRNGIVIGEKKFEFLGFSQ 451

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR GLTA
Sbjct: 452 SQLRENSVWMFASRPGLTA 470


>ref|XP_021665154.1| RNA-dependent RNA polymerase 1-like isoform X1 [Hevea brasiliensis]
          Length = 1161

 Score =  179 bits (453), Expect = 2e-49
 Identities = 92/139 (66%), Positives = 111/139 (79%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +YI S   P  PA+A D GLVY+HRVQITP+KVYF GPE+N+SN V+R+Y +DI N
Sbjct: 371 DQYTKYITSGRLPEPPAVALDDGLVYVHRVQITPAKVYFCGPEVNLSNRVLRNYPDDIKN 430

Query: 229 FIRVSFVEEDCGKIYSADLAPR--SVN-EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+ED  ++YS +L+PR  SVN E RTK+Y RIL ILRNGI I +K+FEFL FS 
Sbjct: 431 FLRVSFVDEDLDRLYSTNLSPRTSSVNEERRTKIYERILSILRNGIVIGEKKFEFLGFSQ 490

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR GLTA
Sbjct: 491 SQLRENSVWMFASRPGLTA 509


>ref|XP_021647480.1| RNA-dependent RNA polymerase 1-like, partial [Hevea brasiliensis]
          Length = 1172

 Score =  179 bits (453), Expect = 2e-49
 Identities = 92/139 (66%), Positives = 111/139 (79%), Gaps = 4/139 (2%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           DQY +YI S   P  PA+A D GLVY+HRVQITP+KVYF GPE+N+SN V+R+Y +DI N
Sbjct: 332 DQYTKYITSGRLPEPPAVALDDGLVYVHRVQITPAKVYFCGPEVNLSNRVLRNYPDDIKN 391

Query: 229 FIRVSFVEEDCGKIYSADLAPR--SVN-EMRTKLYRRILDILRNGIAIDDKRFEFLAFSA 59
           F+RVSFV+ED  ++YS +L+PR  SVN E RTK+Y RIL ILRNGI I +K+FEFL FS 
Sbjct: 392 FLRVSFVDEDLDRLYSTNLSPRTSSVNEERRTKIYERILSILRNGIVIGEKKFEFLGFSQ 451

Query: 58  SQLRDNSAWMFASRRGLTA 2
           SQLR+NS WMFASR GLTA
Sbjct: 452 SQLRENSVWMFASRPGLTA 470


>gb|AQK74661.1| Putative RNA-dependent RNA polymerase [Zea mays]
          Length = 935

 Score =  178 bits (452), Expect = 3e-49
 Identities = 86/119 (72%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
 Frame = -1

Query: 349 DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDNFIRVSFVEEDCGKIYSADLA 170
           D GLVY+HRVQ+TP+KVYFYGPEINVSN V+RH+S DIDNF+R+SFV+EDC K+ SADL+
Sbjct: 193 DDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRHFSADIDNFLRISFVDEDCEKLRSADLS 252

Query: 169 PRSV---NEMRTKLYRRILDILRNGIAIDDKRFEFLAFSASQLRDNSAWMFASRRGLTA 2
           PRS    +  RT LY R+L +L NGI I DK FEFLAFS+SQLRDNSAWMFASR+GLTA
Sbjct: 253 PRSTSGNDARRTALYNRVLSVLSNGINIGDKHFEFLAFSSSQLRDNSAWMFASRQGLTA 311


>ref|XP_008644240.1| putative RNA-dependent RNA polymerase isoform X1 [Zea mays]
 ref|XP_008644241.1| putative RNA-dependent RNA polymerase isoform X1 [Zea mays]
 ref|XP_008644242.1| putative RNA-dependent RNA polymerase isoform X1 [Zea mays]
          Length = 1108

 Score =  178 bits (452), Expect = 3e-49
 Identities = 86/119 (72%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
 Frame = -1

Query: 349 DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDNFIRVSFVEEDCGKIYSADLA 170
           D GLVY+HRVQ+TP+KVYFYGPEINVSN V+RH+S DIDNF+R+SFV+EDC K+ SADL+
Sbjct: 368 DDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRHFSADIDNFLRISFVDEDCEKLRSADLS 427

Query: 169 PRSV---NEMRTKLYRRILDILRNGIAIDDKRFEFLAFSASQLRDNSAWMFASRRGLTA 2
           PRS    +  RT LY R+L +L NGI I DK FEFLAFS+SQLRDNSAWMFASR+GLTA
Sbjct: 428 PRSTSGNDARRTALYNRVLSVLSNGINIGDKHFEFLAFSSSQLRDNSAWMFASRQGLTA 486


>ref|NP_001183933.1| putative RNA-dependent RNA polymerase [Zea mays]
 gb|ACT83377.1| putative RNA-dependent RNA polymerase [Zea mays]
          Length = 1108

 Score =  178 bits (452), Expect = 3e-49
 Identities = 86/119 (72%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
 Frame = -1

Query: 349 DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDNFIRVSFVEEDCGKIYSADLA 170
           D GLVY+HRVQ+TP+KVYFYGPEINVSN V+RH+S DIDNF+R+SFV+EDC K+ SADL+
Sbjct: 368 DDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRHFSADIDNFLRISFVDEDCEKLRSADLS 427

Query: 169 PRSV---NEMRTKLYRRILDILRNGIAIDDKRFEFLAFSASQLRDNSAWMFASRRGLTA 2
           PRS    +  RT LY R+L +L NGI I DK FEFLAFS+SQLRDNSAWMFASR+GLTA
Sbjct: 428 PRSTSGNDARRTALYNRVLSVLSNGINIGDKHFEFLAFSSSQLRDNSAWMFASRQGLTA 486


>gb|KFK23820.1| hypothetical protein AALP_AAs48810U000100, partial [Arabis alpina]
          Length = 256

 Score =  167 bits (422), Expect = 4e-49
 Identities = 82/136 (60%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
 Frame = -1

Query: 406 DQYIEYIKSNIQPPSPAIA-DAGLVYIHRVQITPSKVYFYGPEINVSNCVIRHYSEDIDN 230
           ++Y  +      P SP I+ D GLVY++RVQ+TP++VYF GPE+NVSN V+RHYS  I+N
Sbjct: 87  EEYRTWSAKGKLPLSPTISPDDGLVYMYRVQVTPTRVYFSGPEVNVSNRVLRHYSNYINN 146

Query: 229 FIRVSFVEEDCGKIYSADLAPRSVNEMRTKLYRRILDILRNGIAIDDKRFEFLAFSASQL 50
           F+R+SFV+ED  K+ S DL+PRS+ + RTKLY RI  +LR+GI I +K+FEFLAFS+SQL
Sbjct: 147 FLRISFVDEDLEKVRSMDLSPRSMTQRRTKLYDRIYSVLRDGIVIGEKKFEFLAFSSSQL 206

Query: 49  RDNSAWMFASRRGLTA 2
           R+NSAWMFA R GLTA
Sbjct: 207 RENSAWMFAPRDGLTA 222