BLASTX nr result
ID: Ophiopogon26_contig00034204
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00034204
(789 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020266417.1| uncharacterized protein LOC109841906 [Aspara... 56 2e-20
ref|XP_020253791.1| uncharacterized protein LOC109830842 [Aspara... 54 6e-19
ref|XP_020253777.1| uncharacterized protein LOC109830826 [Aspara... 57 6e-18
ref|XP_020264999.1| uncharacterized protein LOC109840677 [Aspara... 59 3e-17
ref|XP_020267043.1| uncharacterized protein LOC109842598 [Aspara... 57 4e-17
ref|XP_020102569.1| uncharacterized protein LOC109720094 [Ananas... 53 8e-17
ref|XP_020262172.1| uncharacterized protein LOC109838113 [Aspara... 51 2e-16
ref|XP_020262542.1| uncharacterized protein LOC109838519 [Aspara... 52 5e-16
ref|XP_020252248.1| uncharacterized protein LOC109829595 [Aspara... 54 2e-15
ref|XP_020262664.1| uncharacterized protein LOC109838650 [Aspara... 56 2e-15
gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [An... 50 7e-15
gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense] 50 2e-14
gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense] 45 2e-13
gb|KYP50529.1| Putative ribonuclease H protein At1g65750 family ... 43 7e-13
emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera] 44 1e-12
ref|XP_020084915.1| uncharacterized protein LOC109707794 [Ananas... 45 1e-12
gb|PNY00676.1| ribonuclease H [Trifolium pratense] 46 1e-12
ref|XP_020249244.1| uncharacterized protein LOC109826633 [Aspara... 49 2e-12
emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera] 44 2e-12
emb|CAN65707.1| hypothetical protein VITISV_020730 [Vitis vinifera] 44 2e-12
>ref|XP_020266417.1| uncharacterized protein LOC109841906 [Asparagus officinalis]
Length = 855
Score = 56.2 bits (134), Expect(3) = 2e-20
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RLVL+NSV +SIP Y+M+F+KLP WVIK +DKIR+ F
Sbjct: 387 RLVLLNSVLSSIPLYYMSFYKLPSWVIKEVDKIRKNF 423
Score = 48.1 bits (113), Expect(3) = 2e-20
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLV 487
CLV W VC + GLGV D+ L+N ALL KWLWK L ++L+
Sbjct: 436 CLVNWKTVCLSKYEGGLGVKDLKLFNNALLSKWLWKCLDRDSLI 479
Score = 43.9 bits (102), Expect(3) = 2e-20
Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 3/140 (2%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S FW DI + D+F ++ S G +RF D W G +L + +P+L+ + L ++
Sbjct: 504 SMFWNDIISIKDLFLHLLQWSLGSGDKIRFWEDKWTGSNTLSSIYPTLYKLSLSTNVSIR 563
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMH---QRELMIYFDFLTAMNGIALTVILVE*IW*IFYK 66
S W+ SD + +LM + N + + + K
Sbjct: 564 SQGFFHNHIWRWHPLLKRSISDSSTYAKIDLMNHIGLHIVTNNVDIPTWSLTSNGSFSIK 623
Query: 65 TLYGFLSNSGSSCPYYKIIW 6
+ Y FL+ G YYK +W
Sbjct: 624 SHYSFLNTRGILSAYYKTVW 643
>ref|XP_020253791.1| uncharacterized protein LOC109830842 [Asparagus officinalis]
Length = 1301
Score = 53.9 bits (128), Expect(3) = 6e-19
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RLVL+NSV TSIP Y+M+F+KLP WVI IDKI++ F
Sbjct: 883 RLVLLNSVLTSIPLYFMSFYKLPTWVIIEIDKIKKSF 919
Score = 45.1 bits (105), Expect(3) = 6e-19
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVL 505
CLV W VC + GLGV DI ++N ALL KWLWK L
Sbjct: 932 CLVNWKKVCLSKSEGGLGVKDIRVFNCALLAKWLWKYL 969
Score = 43.9 bits (102), Expect(3) = 6e-19
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S FW + + F I + G+ +RF D WIG SL + FPSL+ + L NV
Sbjct: 1000 SSFWNTLISFKEEFFQHIIWTIGSGERIRFWEDKWIGHNSLSSLFPSLYQLALSSNVNVR 1059
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILVE*IW*I------ 75
S + W++ M + + + L + ++ IW +
Sbjct: 1060 SQGFFRDNAWHWSLLLRRCIPHMSRTDKS---NLLNLIGSYQISTHSDIPIWSLTTNGMY 1116
Query: 74 FYKTLYGFLSNSGSSCPYYKIIWQ 3
K+ Y L+ G P+YK+IW+
Sbjct: 1117 SVKSFYQLLNFRGIKSPFYKVIWK 1140
>ref|XP_020253777.1| uncharacterized protein LOC109830826 [Asparagus officinalis]
Length = 896
Score = 56.6 bits (135), Expect(3) = 6e-18
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RLVL+NSV TSIP Y+M+F+KLP W+IK +DKIRR F
Sbjct: 503 RLVLLNSVLTSIPLYFMSFYKLPGWLIKEVDKIRRNF 539
Score = 44.7 bits (104), Expect(3) = 6e-18
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLV 487
CLV W VC + GLGV D+ +N++LL KWLWK L ++ +
Sbjct: 552 CLVNWKRVCMNKLEGGLGVKDLKTFNISLLSKWLWKCLDRDSYI 595
Score = 38.1 bits (87), Expect(3) = 6e-18
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Frame = -2
Query: 407 WQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*Y 228
W DI +F + S G +RF D WIG+ SL + +PSL+++ ++ S
Sbjct: 623 WNDIISNKYVFLQLLSWSLGSGDKIRFWEDKWIGKNSLSSLYPSLYSLAWSNNVSIRSQG 682
Query: 227 SIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILVE*IW*I------FYK 66
++ + W+ + + + DF+ + ++ + +W + K
Sbjct: 683 NLQNNNWHWHPLLKRSITSVPH---SVKLDFMNCIGMHKISNQVDIPLWSLTSNGLFSVK 739
Query: 65 TLYGFLSNSGSSCPYYKIIW 6
+LY FL + G Y I+W
Sbjct: 740 SLYDFLISRGIKSSTYSIVW 759
>ref|XP_020264999.1| uncharacterized protein LOC109840677 [Asparagus officinalis]
Length = 962
Score = 58.5 bits (140), Expect(3) = 3e-17
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RLVL+NSV +SIP Y+M+F+KLPMW+IK IDKIRR F
Sbjct: 544 RLVLLNSVLSSIPLYFMSFYKLPMWLIKEIDKIRRNF 580
Score = 41.6 bits (96), Expect(3) = 3e-17
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVL 505
C+V W VC + GLGV D+ ++N +LL KWLWK L
Sbjct: 593 CMVSWKRVCLTKTEGGLGVKDLKVFNSSLLAKWLWKCL 630
Score = 37.0 bits (84), Expect(3) = 3e-17
Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 9/146 (6%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S FW I ++F I G +RF D W+G SL + +PSL+ + ++
Sbjct: 661 SSFWNAIISHNEVFLHNIEWKLGTGDNIRFWEDKWLGANSLASLYPSLYKLSFSTNVSIN 720
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILV---E*IW*I--- 75
S W+ + Q + I+F MN + L + + W +
Sbjct: 721 SQGFFQDNIWHWHPLMKRSITPSSQND-RIHF-----MNSLQLHHVSTQQDQPRWTLTTS 774
Query: 74 ---FYKTLYGFLSNSGSSCPYYKIIW 6
K+ Y F + G PYYK+ W
Sbjct: 775 GVFSVKSYYNFQISRGILTPYYKVTW 800
>ref|XP_020267043.1| uncharacterized protein LOC109842598 [Asparagus officinalis]
Length = 728
Score = 56.6 bits (135), Expect(3) = 4e-17
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RL L+NSV +SIP Y+M+FFKLP WVI +DKIRR F
Sbjct: 292 RLTLLNSVLSSIPLYYMSFFKLPKWVINAVDKIRRKF 328
Score = 44.3 bits (103), Expect(3) = 4e-17
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = -1
Query: 606 LVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVL 505
+V W VC+ + GLGVIDI +N ALL KW+WK+L
Sbjct: 342 IVNWGTVCKSKEEGGLGVIDIPSFNSALLSKWIWKLL 378
Score = 35.8 bits (81), Expect(3) = 4e-17
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S F QD++ + F R + +G T F D W SL + +P + + L K C++
Sbjct: 409 SRFLQDLFAIQSTFFKIARWNVGNGNTASFWHDKWSSTNSLSSLYPHAYKLALSKNCSIG 468
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFL--TAMNGIALTVILVE*IW*IF--- 72
S S W+ S + ++ L ++ G +L W +
Sbjct: 469 SQGRWTNDSWCWHPLIRRGISPKERADVRNLHSHLENISLGGSQEHDVL---HWPLLSTG 525
Query: 71 ---YKTLYGFLSNSGSSCPYYKIIWQ 3
K+ Y F+S+ G ++ +IW+
Sbjct: 526 IFSVKSFYSFVSSGGQKSKFFNMIWK 551
>ref|XP_020102569.1| uncharacterized protein LOC109720094 [Ananas comosus]
Length = 1027
Score = 52.8 bits (125), Expect(3) = 8e-17
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S +W+ + R D+F+ I DG+ +R DIWIGE L FP+LFA +K V
Sbjct: 807 SQWWKGVLRYRDVFRCSITHDLGDGRNIRLWTDIWIGEAPLSTVFPNLFAQTRNKNVKVS 866
Query: 236 S*YSIVGKSKIWNVR-----FSTLFSDMHQRELMIYFDFL 132
+S G W R FS S + R+L + D L
Sbjct: 867 QSWSARG----WRWRFLCRGFSDSTSSVSGRQLAQFKDHL 902
Score = 42.0 bits (97), Expect(3) = 8e-17
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLT 502
CLV W +C+ + GLG++D+ N ALL KW W+ T
Sbjct: 738 CLVNWKSICKSKRDGGLGILDLESMNAALLSKWWWRFFT 776
Score = 40.8 bits (94), Expect(3) = 8e-17
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 775 KLV*RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIFF 641
KL+ RL ++NSV T++ ++++ FK P WV+ I+ + R FF
Sbjct: 682 KLLSYGGRLTIVNSVLTNLTLFYLSVFKAPKWVLLRIEALHRAFF 726
>ref|XP_020262172.1| uncharacterized protein LOC109838113 [Asparagus officinalis]
Length = 1087
Score = 51.2 bits (121), Expect(3) = 2e-16
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RL L+NSV +SIP Y+ +FFKLP W+I IDK+RR F
Sbjct: 686 RLTLVNSVLSSIPLYYTSFFKLPKWLIHEIDKLRRNF 722
Score = 48.5 bits (114), Expect(3) = 2e-16
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLVN 484
CLV W VC + GLGVID+ ++N ALL KW+WK+ +++++
Sbjct: 735 CLVAWKTVCLPKKEGGLGVIDLTVFNQALLSKWIWKIFDRDSIIS 779
Score = 34.7 bits (78), Expect(3) = 2e-16
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = -2
Query: 365 IRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*YSIVGKSKIWNVRFS 186
+R +G++ RF +D W SL + FP F + K CN+ S ++ W+
Sbjct: 820 VRWKVGNGRSCRFWLDKWSSPNSLGSLFPKAFNLAFSKDCNLRSQGYMLNHVWHWHFTLR 879
Query: 185 TLFSDMHQRELMIYFDFLTAMNG 117
S ++E+ + L + +G
Sbjct: 880 RGISPEERQEIQKLYSHLESFSG 902
>ref|XP_020262542.1| uncharacterized protein LOC109838519 [Asparagus officinalis]
Length = 856
Score = 52.4 bits (124), Expect(3) = 5e-16
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RLVL+NSV +SI Y+M+F+KLP WVIK +DKIR+ F
Sbjct: 536 RLVLLNSVLSSILLYYMSFYKLPSWVIKEVDKIRKNF 572
Score = 44.7 bits (104), Expect(3) = 5e-16
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENL 490
CL W VC + GLGV D+ ++N ALL KWLWK L ++L
Sbjct: 585 CLANWKTVCLSKFEGGLGVKDLKIFNNALLSKWLWKCLDRDSL 627
Score = 35.8 bits (81), Expect(3) = 5e-16
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S FW DI + D+F ++ S G +RF D W G +L + +P L+ + L +++
Sbjct: 653 SKFWNDIISIKDLFLHLLQWSLGSGDKIRFWEDKWTGSNTLSSLYPILYKLSLSTNVSIW 712
>ref|XP_020252248.1| uncharacterized protein LOC109829595 [Asparagus officinalis]
Length = 942
Score = 54.3 bits (129), Expect(3) = 2e-15
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = -3
Query: 763 RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R RLVL+N V +SIP++W+++F P+WVI+ IDK+RR F
Sbjct: 605 RGGRLVLVNDVLSSIPTFWLSYFLFPVWVIEKIDKMRRRF 644
Score = 44.7 bits (104), Expect(3) = 2e-15
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = -1
Query: 606 LVRWDYVCR---CRGLGVIDIILYNLALLDKWLWKVLTLE 496
LV+WD VC+ C GLGV ++ + N ALL KWLWK +E
Sbjct: 658 LVKWDEVCKPKKCGGLGVKNLKVMNKALLGKWLWKCTRVE 697
Score = 31.6 bits (70), Expect(3) = 2e-15
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -2
Query: 398 IWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*YSIV 219
+W+ C +IG +G F +D W+G +L + FPSLF+ V S
Sbjct: 690 LWK-CTRVEIG------NGNYALFWLDKWLGSFTLASLFPSLFSFTTSPYACVSSLRKFE 742
Query: 218 GKSKIWNVRF 189
S W + F
Sbjct: 743 NDSWRWEIHF 752
>ref|XP_020262664.1| uncharacterized protein LOC109838650 [Asparagus officinalis]
Length = 887
Score = 55.8 bits (133), Expect(3) = 2e-15
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
RL L+NSV +S+P Y+M+FFKLP W+IK ID+IRR F
Sbjct: 457 RLTLLNSVLSSLPLYYMSFFKLPKWLIKAIDRIRRNF 493
Score = 39.7 bits (91), Expect(3) = 2e-15
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S F +D+ + F I+ + DGK F D WI + SL + FP + + L + C++
Sbjct: 562 SRFCKDLSSIKSTFFNLIKWNIGDGKAGSFWHDKWIAQNSLCSLFPKAYHLALSQNCSIR 621
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILVE*IW------*I 75
S + IW+ S + + L + N ++++ + W
Sbjct: 622 SQGRFLNNVWIWHPLIRRGISPSERLDKHHLLTLLASSN-LSISPTPDKLWWPHNPSGTY 680
Query: 74 FYKTLYGFLSNSGSSCPYYKIIWQ 3
K+LY F+++ G ++ +IW+
Sbjct: 681 SVKSLYSFVNSGGIKSKFFSMIWK 704
Score = 35.0 bits (79), Expect(3) = 2e-15
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDK 523
CL++W VC+ + GLGVID +N+ALL K
Sbjct: 506 CLIKWGKVCKSKAEGGLGVIDTENFNIALLSK 537
>gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
Length = 753
Score = 50.4 bits (119), Expect(3) = 7e-15
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 775 KLV*RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIFF 641
KL+ R RL+L+N+V T++P Y+++ FK P WVI I+ +RR FF
Sbjct: 436 KLLSRYGRLILVNAVLTNLPLYFLSMFKAPKWVIARIEALRRDFF 480
Score = 41.2 bits (95), Expect(3) = 7e-15
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENL 490
CLV W +C+ + GLGV+D+ N ALL KW WK + +L
Sbjct: 492 CLVAWKNICKSKKKGGLGVLDLDTMNHALLTKWWWKFFSEPHL 534
Score = 37.4 bits (85), Expect(3) = 7e-15
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKC--- 246
S++W+ + L IFK G G ++ F D W G+ +L + FP ++++ K C
Sbjct: 561 SYWWKGVLGLNKIFKWGALHKLGYGDSIDFWSDRWYGDKTLQSVFPEIYSLSHCKNCKSR 620
Query: 245 ---------NVFS*YSIVG-------KSKIWNVR 192
V S YS++ +SKIW+ R
Sbjct: 621 VGLEQDWWFTVKSVYSMLNDGGLRDDRSKIWSFR 654
>gb|PNX79011.1| ribonuclease H, partial [Trifolium pratense]
Length = 497
Score = 50.1 bits (118), Expect(3) = 2e-14
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Frame = -2
Query: 416 SHFWQDIWRLCDI-----FKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDK 252
S +W+D+ R+ D F + DGK++ F + WIGEV L+ +P+LFAI K
Sbjct: 316 SIWWRDVARVGDTADDCWFPKNVSCGLGDGKSISFWKEKWIGEVPLMELYPNLFAIECFK 375
Query: 251 KCNVFS*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALT 105
V + G ++ WN+ +S S+ +E+ + +NGI LT
Sbjct: 376 NVVVADRFPDNGHNQEWNLFWSMDLSEFEMKEVE---ELQILLNGIMLT 421
Score = 38.9 bits (89), Expect(3) = 2e-14
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWK 511
C V+W++VC + GLGV + L+N ALL KW W+
Sbjct: 244 CWVKWEHVCLPKEKGGLGVKTLDLFNQALLSKWKWR 279
Score = 38.1 bits (87), Expect(3) = 2e-14
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R++LINSV +S+P Y+ +FF+ P +I+ + K++R F
Sbjct: 196 RVMLINSVLSSLPLYFYSFFRAPKGIIRKLVKLQRNF 232
>gb|PNX79113.1| ribonuclease H, partial [Trifolium pratense]
Length = 615
Score = 45.4 bits (106), Expect(3) = 2e-13
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -2
Query: 416 SHFWQDIWRL-----CDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDK 252
S +W+DIW + + F G+ K G +F DIW+G V L FP LF++ K
Sbjct: 329 STWWKDIWSIRVNLNTNWFTQGVIKRIGCGDQTKFWRDIWVGTVPLQERFPRLFSVSTQK 388
Query: 251 KCNV 240
CNV
Sbjct: 389 DCNV 392
Score = 40.4 bits (93), Expect(3) = 2e-13
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = -1
Query: 603 VRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLEN 493
V+WD VC+ + GLGV DI N++LL KW W++L +N
Sbjct: 259 VKWDTVCKPKKLGGLGVRDIRAVNISLLAKWRWRLLEDDN 298
Score = 38.1 bits (87), Expect(3) = 2e-13
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = -3
Query: 775 KLV*RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
K V R+VL+N+V +IP ++++F K+P+ V K + +I+R F
Sbjct: 202 KYVSLGGRIVLLNAVLNAIPIFYLSFIKIPVLVWKKVQRIQREF 245
>gb|KYP50529.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 972
Score = 43.1 bits (100), Expect(3) = 7e-13
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = -2
Query: 416 SHFWQDIWRLCDI--FKIGIRKSCC--DGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKK 249
S +W+D+ +C F + +C DG T+RF +D W+G V+L FP LF +K+
Sbjct: 756 SDWWKDVAWVCQQADFWVDASLNCVIGDGTTIRFWVDKWVGGVALAEVFPRLFFATANKE 815
Query: 248 CNVFS*YSIVGKSKIWNVRFSTLFS 174
V +WN S ++
Sbjct: 816 SKTSENGRFVEDMFVWNCDTSRAYT 840
Score = 41.6 bits (96), Expect(3) = 7e-13
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = -1
Query: 609 CLVRWDYVCRC---RGLGVIDIILYNLALLDKWLWKVLTLEN 493
C V+WD VC+ GLG+ ++ +N++LL KW+W+ L N
Sbjct: 687 CWVKWDQVCKPIKEGGLGIKNVAWFNMSLLGKWVWRGLKFPN 728
Score = 37.4 bits (85), Expect(3) = 7e-13
Identities = 16/37 (43%), Positives = 28/37 (75%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R+ L+N V S+P ++++F+K+P+ VIK + KI+R F
Sbjct: 639 RVTLLNVVLNSLPLHYLSFWKMPLSVIKEVVKIQRRF 675
>emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera]
Length = 2099
Score = 43.5 bits (101), Expect(3) = 1e-12
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -2
Query: 407 WQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*Y 228
W+ I ++ F R +G+ +RF D+W G+ L + +PSLF +VLDK +
Sbjct: 1650 WKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGDQPLGSQYPSLFRVVLDKNIPI---S 1706
Query: 227 SIVGKSK--IWNVRFSTLFSDMHQREL 153
S++G ++ WN+ F SD +L
Sbjct: 1707 SVLGPTRPFSWNLNFRRNLSDSEIEDL 1733
Score = 42.7 bits (99), Expect(3) = 1e-12
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = -1
Query: 606 LVRWDYVCRCR---GLGVIDIILYNLALLDKWLWK 511
LVRWD VC+ + GLG +I L NLALL KWLW+
Sbjct: 1578 LVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWR 1612
Score = 35.0 bits (79), Expect(3) = 1e-12
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R+ LI S T +P Y+++ FKLP V I++++R F
Sbjct: 1529 RITLIQSCLTHMPCYYLSLFKLPAXVAAKIERLQRDF 1565
>ref|XP_020084915.1| uncharacterized protein LOC109707794 [Ananas comosus]
Length = 873
Score = 44.7 bits (104), Expect(3) = 1e-12
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = -3
Query: 775 KLV*RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIFF 641
KL+ R++L+NSV +++P ++ A FK WV+ I+ +RR FF
Sbjct: 542 KLLSHGGRVILVNSVLSNLPLFYFAIFKASQWVLNRIEALRRAFF 586
Score = 38.5 bits (88), Expect(3) = 1e-12
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLV 487
CLV W +C+ + GLG+ D+ N ALL KW W+ +L+
Sbjct: 598 CLVSWKIICKSKREGGLGIKDMEAMNKALLTKWWWRFFNERHLL 641
Score = 37.7 bits (86), Expect(3) = 1e-12
Identities = 34/137 (24%), Positives = 52/137 (37%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S +W+ + ++FK G+ DGK +R+ DIWI E L F I K N+
Sbjct: 667 SQWWRSVMSCREVFKCGVSYVLGDGKNIRWWSDIWIEETPLSTRFSDRQLITSLK--NLL 724
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILVE*IW*IFYKTLY 57
+ YS G I R+ TA + K+LY
Sbjct: 725 NPYSPSGLHDILKWRW-------------------TANQNFTV-------------KSLY 752
Query: 56 GFLSNSGSSCPYYKIIW 6
F++++G P Y +W
Sbjct: 753 DFVTDAGQIDPLYDHLW 769
>gb|PNY00676.1| ribonuclease H [Trifolium pratense]
Length = 962
Score = 45.8 bits (107), Expect(3) = 1e-12
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLV 487
C V+WD +CR + GLG+ D+ L N++LL KW WK+L+ E V
Sbjct: 575 CWVKWDDICRPKNEAGLGIRDLRLVNISLLAKWRWKLLSHETEV 618
Score = 37.7 bits (86), Expect(3) = 1e-12
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = -2
Query: 416 SHFWQDIWRL---CDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKC 246
S +W+D+ L + F + K G + F ++W+G SL FP LF I L ++
Sbjct: 647 STWWRDLCHLENDSNWFSSAVGKKVGRGDSTSFWNEVWVGGQSLRQRFPRLFGISLQQQV 706
Query: 245 NVFS*YSIVGKSKIWNV 195
+ + S++G WN+
Sbjct: 707 MIQNAGSVIGGRWQWNL 723
Score = 37.4 bits (85), Expect(3) = 1e-12
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = -3
Query: 775 KLV*RADRLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
K V R+VLIN+V +IP +++++ K+PM V + + K++R F
Sbjct: 520 KFVSLGGRIVLINAVLNAIPIFFLSYMKMPMMVWRELVKVQRNF 563
>ref|XP_020249244.1| uncharacterized protein LOC109826633 [Asparagus officinalis]
Length = 772
Score = 49.3 bits (116), Expect(3) = 2e-12
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Frame = -1
Query: 609 CLVRWDYVCRCR---GLGVIDIILYNLALLDKWLWKVLTLENLVN 484
CL+ W VC+ + GLGV+DI +N ALL KWLW++ E+L++
Sbjct: 404 CLISWRKVCKSKSEGGLGVLDIETFNRALLSKWLWRLFERESLIS 448
Score = 44.7 bits (104), Expect(3) = 2e-12
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Frame = -2
Query: 416 SHFWQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVF 237
S F D+ + F ++ DGKT F D W G SL + FP + + L + C++
Sbjct: 472 SRFILDLSSISSTFFSLVKWRTGDGKTGSFWHDKWSGTNSLSSLFPKAYQLALSQSCSIR 531
Query: 236 S*YSIVGKSKIWNVRFSTLFSDMHQRELMIYFDFLTAMNGIALTVILVE*IW*IF----- 72
S ++ S W S + + + LT+ N I ++ E +W +
Sbjct: 532 SQGRMINLSWNWYPLIRRGISPSERSDQNLLLTHLTSSN-INISSTSDELLWTLLPSGIY 590
Query: 71 -YKTLYGFLSNSGSSCPYYKIIWQ 3
K+ Y +++ G +Y +IW+
Sbjct: 591 SVKSFYSLVNSGGIKSKFYSMIWR 614
Score = 26.9 bits (58), Expect(3) = 2e-12
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 685 MWVIKCIDKIRRIF 644
MW+IK IDKIRR F
Sbjct: 378 MWLIKAIDKIRRNF 391
>emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]
Length = 1927
Score = 43.5 bits (101), Expect(3) = 2e-12
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -2
Query: 407 WQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*Y 228
W+ I ++ F R +G+ +RF D+W G+ L + +PSLF +VLDK +
Sbjct: 1621 WKAISQVFQEFSSFTRFVVGNGEXIRFWEDLWWGDQPLGSQYPSLFRVVLDKNIPI---S 1677
Query: 227 SIVGKSK--IWNVRFSTLFSDMHQREL 153
S++G ++ WN+ F SD +L
Sbjct: 1678 SVLGPTRPFSWNLNFRRNLSDSEIEDL 1704
Score = 42.7 bits (99), Expect(3) = 2e-12
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = -1
Query: 606 LVRWDYVCRCR---GLGVIDIILYNLALLDKWLWK 511
LVRWD VC+ + GLG +I L NLALL KWLW+
Sbjct: 1549 LVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWR 1583
Score = 34.3 bits (77), Expect(3) = 2e-12
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R+ LI S T +P Y+++ FKLP V I++++R F
Sbjct: 1500 RITLIQSCLTHMPCYYLSLFKLPASVAAKIERLQRDF 1536
>emb|CAN65707.1| hypothetical protein VITISV_020730 [Vitis vinifera]
Length = 350
Score = 43.9 bits (102), Expect(3) = 2e-12
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = -2
Query: 407 WQDIWRLCDIFKIGIRKSCCDGKTVRF*IDIWIGEVSLVAAFPSLFAIVLDKKCNVFS*Y 228
W+ I ++ F + R +G+ +RF ++W G+ L +P LF +V+DK ++
Sbjct: 246 WKAIAQVFQGFSLITRYVVGNGERIRFWEBLWWGDQPLGIQYPRLFRVVVDKNISI---S 302
Query: 227 SIVGKSK--IWNVRFSTLFSDMHQREL 153
S++G S+ +WN+ F SD +L
Sbjct: 303 SVLGPSRPFLWNLNFRRNLSDSEIEDL 329
Score = 41.2 bits (95), Expect(3) = 2e-12
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = -1
Query: 606 LVRWDYVCRCR---GLGVIDIILYNLALLDKWLWK 511
LVRWD VC+ + GLG+ +I NLALL KWLW+
Sbjct: 174 LVRWDVVCKPKTIGGLGLGNISWRNLALLGKWLWR 208
Score = 35.4 bits (80), Expect(3) = 2e-12
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = -3
Query: 754 RLVLINSVFTSIPSYWMAFFKLPMWVIKCIDKIRRIF 644
R+ LI S T +PSY+++ FK+P V I++++R F
Sbjct: 125 RITLIQSCLTHLPSYFLSLFKIPASVAAKIERLQRDF 161