BLASTX nr result

ID: Ophiopogon26_contig00034158 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00034158
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245344.1| uncharacterized protein LOC109823472 [Aspara...    58   2e-07

>ref|XP_020245344.1| uncharacterized protein LOC109823472 [Asparagus officinalis]
          Length = 192

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
 Frame = -1

Query: 335 PLKHSHLRDFLRLYQTDILLLQEFKISHSSXXXXXXXXXXXLDCWCHLNSVDSSDG*LIG 156
           PLK   ++DFL  +  D+  LQE K+S  +           L  WC+LNS +S  G L+G
Sbjct: 14  PLKRRLVKDFLSSHLIDVAGLQESKLSDPTPRKLQSIGGRRLSEWCYLNSTESRGGVLVG 73

Query: 155 RRSDCFDLISQLVGEFVLSVKLRCYNMNLIFSI-SVYGPCGDIDRCSFGTEL 3
             SD F LI   VG F +SV L     N  F+  SVY P    DR     EL
Sbjct: 74  -WSDAFSLIQSHVGIFSVSVHLHHKPSNYSFTFTSVYAPIDKEDRAVCWWEL 124


Top