BLASTX nr result

ID: Ophiopogon26_contig00033959 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00033959
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020255617.1| transcription termination factor MTERF8, chl...    61   5e-08
ref|XP_008796621.1| PREDICTED: uncharacterized protein LOC103712...    59   3e-07

>ref|XP_020255617.1| transcription termination factor MTERF8, chloroplastic-like isoform
           X1 [Asparagus officinalis]
 ref|XP_020255618.1| transcription termination factor MTERF8, chloroplastic-like isoform
           X2 [Asparagus officinalis]
          Length = 382

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 27/51 (52%), Positives = 38/51 (74%)
 Frame = +2

Query: 2   LKSNGLVGRDYDFYSISMISEKKFKDRFILRYKDITPTLLQTYNAACARKI 154
           LKS+ LVGRD++FYS+  +S K+F  + +LRYKD+ P L QTY + CA +I
Sbjct: 330 LKSDELVGRDWEFYSLIPLSHKEFFKKIVLRYKDLVPNLYQTYISCCASQI 380


>ref|XP_008796621.1| PREDICTED: uncharacterized protein LOC103712027 [Phoenix
           dactylifera]
          Length = 379

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +2

Query: 2   LKSNGLVGRDYDFYSISMISEKKFKDRFILRYKDITPTLLQTYNAACARKIP 157
           LKS  L+ +D DF ++  +SEK+F D+FILR+K+  P L QTY  ACA +IP
Sbjct: 327 LKSEKLIKKDLDFNAVVALSEKRFVDKFILRHKEQVPNLHQTYTDACAGRIP 378


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