BLASTX nr result

ID: Ophiopogon26_contig00033873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00033873
         (561 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253716.1| structure-specific endonuclease subunit SLX1...    97   2e-20
ref|XP_020243635.1| structure-specific endonuclease subunit SLX1...    72   2e-11
gb|ONK61800.1| uncharacterized protein A4U43_C08F33710 [Asparagu...    72   4e-11
ref|XP_010922708.1| PREDICTED: structure-specific endonuclease s...    63   3e-08
ref|XP_020693353.1| structure-specific endonuclease subunit SLX1...    60   3e-07
gb|PKU74471.1| structure-specific endonuclease subunit SLX1 [Den...    60   3e-07
ref|XP_008810572.1| PREDICTED: structure-specific endonuclease s...    60   4e-07

>ref|XP_020253716.1| structure-specific endonuclease subunit SLX1 homolog 2-like
           [Asparagus officinalis]
          Length = 386

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 56/114 (49%), Positives = 68/114 (59%)
 Frame = +3

Query: 9   REEPSFGWLHESGLKRRSTSLGYSYNEVSVDSLIISPSAGTKRWEFCTDDQSCSSFIDCG 188
           R+E S  WL +S L+RR +SL  S N+ S DSL+ISP   TK   FC DD+S        
Sbjct: 297 RDENSCEWLQQSNLQRRPSSLRSSKNDSSTDSLLISPVLETKAQNFCIDDES-------- 348

Query: 189 TDRLRQETDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVHSEIIDLTDSPIIIQ 350
                            +VI+LSTPSSCI+ K NKRAKVHS+IIDLTDSP+ IQ
Sbjct: 349 -----------------NVISLSTPSSCIVEKRNKRAKVHSDIIDLTDSPVTIQ 385


>ref|XP_020243635.1| structure-specific endonuclease subunit SLX1 homolog [Asparagus
           officinalis]
          Length = 343

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +3

Query: 210 TDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVHSEIIDLTDSPIIIQL 353
           T+  LF DEG++I+LSTPSSCI+ KC K+AKV SE IDLT+SP +IQL
Sbjct: 296 TEGALFQDEGNIIDLSTPSSCIVAKCKKKAKVSSEFIDLTNSPFVIQL 343


>gb|ONK61800.1| uncharacterized protein A4U43_C08F33710 [Asparagus officinalis]
          Length = 1790

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 32/48 (66%), Positives = 40/48 (83%)
 Frame = +3

Query: 210  TDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVHSEIIDLTDSPIIIQL 353
            T+  LF DEG++I+LSTPSSCI+ KC K+AKV SE IDLT+SP +IQL
Sbjct: 1743 TEGALFQDEGNIIDLSTPSSCIVAKCKKKAKVSSEFIDLTNSPFVIQL 1790


>ref|XP_010922708.1| PREDICTED: structure-specific endonuclease subunit SLX1 homolog 2
           [Elaeis guineensis]
          Length = 420

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
 Frame = +3

Query: 24  FGWLHESGLKRRSTSLGYSYNEVSVDSLIISPSAGTKRWEFCTDDQSCSSFIDCGTDRLR 203
           F W      ++   ++ Y  +E    ++  S ++ +K    C+ D         G D+ R
Sbjct: 301 FYWQESDSSRQSVEAMSYCLSESPHPNMECSKTSSSKTLRSCSRDP-IERLQGNGLDKSR 359

Query: 204 QET-----------DSLLFSDEGDVINLSTPSSCIIRKCNKRAKVHSEIIDLTDSPIIIQ 350
           Q             DS   S EGDVINL TPSS +I    KR  V+ EIIDLTDSP+IIQ
Sbjct: 360 QPVTPQRSNNKASLDSPYLSPEGDVINLVTPSSNLIHSQTKRTLVYPEIIDLTDSPVIIQ 419

Query: 351 L 353
           L
Sbjct: 420 L 420


>ref|XP_020693353.1| structure-specific endonuclease subunit SLX1 [Dendrobium catenatum]
          Length = 369

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
 Frame = +3

Query: 162 SCSSFIDCGTDRLRQE-----------TDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVH 308
           SCS   D G D+ RQ+           T SLL S + DVINL TPSS +IR   KRA   
Sbjct: 297 SCSE--DSGMDQARQKSTPRSSDNEAMTSSLLLSPKVDVINLCTPSSGVIRSKTKRALFD 354

Query: 309 SEIIDLTDSPIIIQL 353
           S IIDLTDSP++IQL
Sbjct: 355 SIIIDLTDSPMVIQL 369


>gb|PKU74471.1| structure-specific endonuclease subunit SLX1 [Dendrobium catenatum]
          Length = 393

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 11/75 (14%)
 Frame = +3

Query: 162 SCSSFIDCGTDRLRQE-----------TDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVH 308
           SCS   D G D+ RQ+           T SLL S + DVINL TPSS +IR   KRA   
Sbjct: 321 SCSE--DSGMDQARQKSTPRSSDNEAMTSSLLLSPKVDVINLCTPSSGVIRSKTKRALFD 378

Query: 309 SEIIDLTDSPIIIQL 353
           S IIDLTDSP++IQL
Sbjct: 379 SIIIDLTDSPMVIQL 393


>ref|XP_008810572.1| PREDICTED: structure-specific endonuclease subunit slx1 [Phoenix
           dactylifera]
          Length = 421

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
 Frame = +3

Query: 24  FGWLHESGLKRRSTSLGYSYNEVSVDSLIISPSAGTKRWEFCTDDQ-SCSSFIDCGTDRL 200
           F W      +R   ++ Y  +E     L  S ++ ++    C  D   C    D    R 
Sbjct: 302 FHWKESDNSRRSMEAMSYCLSESPQPILERSKTSSSRTPRSCGRDPIGCLQGNDLDESRQ 361

Query: 201 ---------RQETDSLLFSDEGDVINLSTPSSCIIRKCNKRAKVHSEIIDLTDSPIIIQL 353
                    +   DS   S EGDVINL TPSS +I    KR  V+ EIIDLTDSP+IIQL
Sbjct: 362 PSTPQRSNNKASLDSQSLSPEGDVINLVTPSSYLIHFRTKRTLVYPEIIDLTDSPVIIQL 421


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