BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00033752
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD65542.1| replicase, partial [Cassia mild mosaic virus]          283   1e-88
gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]      281   1e-86
ref|YP_004659200.1| replication-associated polyprotein [Blackber...   283   3e-85
gb|AGG13288.1| Replicase, partial [Garlic virus A]                    271   9e-84
gb|AGC67029.1| replicase [Shallot virus X]                            275   5e-82
gb|AGC09135.1| Replicase, partial [Garlic virus A]                    269   6e-82
ref|NP_620648.1| replicase [Shallot virus X] >gi|548840|sp|Q0457...   274   6e-82
ref|NP_569132.1| replicase [Garlic virus C] >gi|2826157|dbj|BAA6...   273   1e-81
gb|AGG13300.1| Replicase [Garlic virus C]                             273   1e-81
ref|YP_009389473.1| RNA-dependent RNA polymerase [Vanilla latent...   272   3e-81
gb|ABQ96641.1| replicase, partial [Garlic virus B1]                   265   1e-80
gb|AHB33487.1| replicase [Garlic virus A]                             269   4e-80
gb|APG31855.1| RdRp [Arachis pintoi virus]                            268   6e-80
gb|AGG13294.1| Replicase [Garlic virus C]                             268   7e-80
ref|YP_009328892.1| RdRp [Arachis pintoi virus] >gi|1109489164|g...   268   8e-80
ref|NP_569126.1| replicase [Garlic virus A] >gi|2826150|dbj|BAA6...   268   9e-80
gb|AGC09141.1| Replicase [Garlic virus A]                             268   9e-80
gb|AEV51816.1| replicase, partial [Garlic virus C]                    267   1e-79
gb|AGG13306.1| Replicase [Garlic virus X]                             265   1e-78
ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E] >g...   265   1e-78

>gb|ADD65542.1| replicase, partial [Cassia mild mosaic virus]
          Length = 693

 Score =  283 bits (723), Expect = 1e-88
 Identities = 140/187 (74%), Positives = 154/187 (82%)
 Frame = +3

Query: 3   GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
           GLTL HVTI LD DTPLCS EVLYTAFSRA+ +ITFVNTHS+HP FL KL+ATPYLKTL+
Sbjct: 239 GLTLPHVTIALDNDTPLCSREVLYTAFSRASESITFVNTHSDHPDFLAKLEATPYLKTLL 298

Query: 183 SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
           SGVREDE AG+D  P EPQV +P +KTHLPV N   FLE KIEAM DKD RELWDG EKT
Sbjct: 299 SGVREDEEAGRDYKPPEPQVVEPTLKTHLPVGNAENFLEEKIEAMEDKDTRELWDGEEKT 358

Query: 363 NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
           NLMQT +P++QLFPHQQAKDEALF +TI +RIKIAT  EN KAI   L  GDLLFEAYA 
Sbjct: 359 NLMQTHNPIIQLFPHQQAKDEALFNLTIQQRIKIATPAENEKAIADTLKTGDLLFEAYAD 418

Query: 543 FMRVPKE 563
           FM+VPKE
Sbjct: 419 FMKVPKE 425


>gb|AHB87051.1| putative RNA replicase, partial [Escobaria virus]
          Length = 851

 Score =  281 bits (718), Expect = 1e-86
 Identities = 137/187 (73%), Positives = 158/187 (84%)
 Frame = +3

Query: 3   GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
           GLTL H+TIVLD DTPLCS EVLYT FSRA+ +ITFVNT+S++P FL KLDATPYLKTLI
Sbjct: 279 GLTLPHITIVLDNDTPLCSTEVLYTVFSRASESITFVNTYSDNPDFLSKLDATPYLKTLI 338

Query: 183 SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
           SGVREDENAGK    EEP+V +P VKTHLPVEN   FLE KIE M DKD RELWDG EKT
Sbjct: 339 SGVREDENAGKTQKIEEPEVAEPPVKTHLPVENQDVFLEEKIEVMEDKDTRELWDGEEKT 398

Query: 363 NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
           NLMQT++P+VQLFPHQQAKDEALF+ITI++RI+ A+ +EN K +V +L  GDLLFEAYA 
Sbjct: 399 NLMQTENPIVQLFPHQQAKDEALFKITIEQRIRTASPEENVKQLVDKLRVGDLLFEAYAD 458

Query: 543 FMRVPKE 563
           FM+VP+E
Sbjct: 459 FMKVPRE 465


>ref|YP_004659200.1| replication-associated polyprotein [Blackberry virus E]
 gb|AEI17897.1| replication-associated polyprotein [Blackberry virus E]
          Length = 1499

 Score =  283 bits (725), Expect = 3e-85
 Identities = 139/187 (74%), Positives = 159/187 (85%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL HVTIVLD DTPLCS EVLYTAFSRA  +ITFVNTHS+HP FL KLD+TPYLKTL+
Sbjct: 930  GLTLPHVTIVLDNDTPLCSNEVLYTAFSRAPESITFVNTHSDHPDFLAKLDSTPYLKTLL 989

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AGKD P  +P+V +P +KTHLPV N  T+LE K+E M DKD RELWDG+EKT
Sbjct: 990  SGVREDEQAGKDDPLPKPEVREPMIKTHLPVANLETYLEDKVEQMEDKDTRELWDGKEKT 1049

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF++TI++RI+ AT  EN+K++   L AGDLLFEAY+ 
Sbjct: 1050 NLMQTQDPVVQLFPHQQAKDEALFKLTIEQRIRTATPAENSKSVQHTLQAGDLLFEAYSD 1109

Query: 543  FMRVPKE 563
            FMRVPKE
Sbjct: 1110 FMRVPKE 1116


>gb|AGG13288.1| Replicase, partial [Garlic virus A]
          Length = 760

 Score =  271 bits (694), Expect = 9e-84
 Identities = 132/187 (70%), Positives = 154/187 (82%)
 Frame = +3

Query: 3   GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
           GLTLNH+TIVLD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P+FL KLDATPYLKTLI
Sbjct: 158 GLTLNHLTIVLDKDTPLCSEEVLYTAFSRASESITFVNTHSDNPEFLAKLDATPYLKTLI 217

Query: 183 SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
           S VREDE AG   PP EP V +   KTH+PV ND   L+ K+E M DKD RELW G EKT
Sbjct: 218 SWVREDEQAGSSNPPPEPNVREEPTKTHIPVTNDRVQLDDKVETMEDKDTRELWSGEEKT 277

Query: 363 NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
           NLMQTQDP+VQLFPHQQ+KDEALF+ITID+RI+ A  ++N K++   L+AGDLLFEAYA+
Sbjct: 278 NLMQTQDPIVQLFPHQQSKDEALFKITIDERIRTADPEKNAKSLQHTLNAGDLLFEAYAQ 337

Query: 543 FMRVPKE 563
           FM+VP E
Sbjct: 338 FMKVPAE 344


>gb|AGC67029.1| replicase [Shallot virus X]
          Length = 1719

 Score =  275 bits (702), Expect = 5e-82
 Identities = 137/187 (73%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTLNH+TI+LD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P FL KLDATPYLKTLI
Sbjct: 1106 GLTLNHLTIILDKDTPLCSDEVLYTAFSRASESITFVNTHSDNPAFLAKLDATPYLKTLI 1165

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            S VREDE AG D P  EP V     KTH+PV ND   LE KIEAM DKD RELW G EKT
Sbjct: 1166 SWVREDEQAGADCPATEPHVEDVPTKTHIPVANDKVQLEGKIEAMEDKDTRELWSGEEKT 1225

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF+ITI +RI++AT ++N K +   L+AGDLLFEAYA+
Sbjct: 1226 NLMQTQDPVVQLFPHQQAKDEALFKITIGERIRMATPEQNIKQLRHTLNAGDLLFEAYAQ 1285

Query: 543  FMRVPKE 563
            FM+VPKE
Sbjct: 1286 FMKVPKE 1292


>gb|AGC09135.1| Replicase, partial [Garlic virus A]
          Length = 891

 Score =  269 bits (688), Expect = 6e-82
 Identities = 132/187 (70%), Positives = 152/187 (81%)
 Frame = +3

Query: 3   GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
           GLTLNH+TIVLD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P+FL KLD TPYLKTLI
Sbjct: 289 GLTLNHLTIVLDKDTPLCSEEVLYTAFSRASESITFVNTHSDNPEFLAKLDTTPYLKTLI 348

Query: 183 SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
           S VREDE AG   PP EP V     KTH+PV ND   L+ K+E M DKD RELW G EKT
Sbjct: 349 SWVREDEQAGASEPPPEPNVRDEPTKTHIPVTNDRVQLDDKVETMEDKDTRELWSGEEKT 408

Query: 363 NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
           NLMQTQDPVVQLFPHQQAKDEALF+ITI++RI+ A  ++N K++   L+AGDLLFEAYA+
Sbjct: 409 NLMQTQDPVVQLFPHQQAKDEALFKITINERIRTANPEKNAKSLQQTLNAGDLLFEAYAQ 468

Query: 543 FMRVPKE 563
           FM+VP E
Sbjct: 469 FMKVPAE 475


>ref|NP_620648.1| replicase [Shallot virus X]
 sp|Q04575.1|RDRP_SHVX RecName: Full=RNA replication protein; AltName: Full=194 kDa protein;
            Includes: RecName: Full=RNA-directed RNA polymerase;
            Includes: RecName: Full=Helicase
 gb|AAA47787.1| replicase [Shallot virus X]
          Length = 1718

 Score =  274 bits (701), Expect = 6e-82
 Identities = 137/187 (73%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTLNH+TI+LD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P FL KLDATPYLKTLI
Sbjct: 1106 GLTLNHLTIILDKDTPLCSDEVLYTAFSRASESITFVNTHSDNPAFLAKLDATPYLKTLI 1165

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            S VREDE AG D P  EP V     KTH+PV ND   LE KIEAM DKD RELW G EKT
Sbjct: 1166 SWVREDEEAGADCPATEPLVKDVPTKTHIPVANDKVQLEGKIEAMEDKDTRELWSGEEKT 1225

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF+ITI +RI++AT ++N K +   L+AGDLLFEAYA+
Sbjct: 1226 NLMQTQDPVVQLFPHQQAKDEALFKITIGERIRMATPEQNAKQLRHTLNAGDLLFEAYAQ 1285

Query: 543  FMRVPKE 563
            FM+VPKE
Sbjct: 1286 FMKVPKE 1292


>ref|NP_569132.1| replicase [Garlic virus C]
 dbj|BAA61818.1| replicase [Garlic virus C]
          Length = 1550

 Score =  273 bits (699), Expect = 1e-81
 Identities = 135/187 (72%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H++IVLD DTPLCS EVLYTA SRA+ TITF+NTHS + +FL KLD+TPYLKTLI
Sbjct: 948  GLTLPHLSIVLDKDTPLCSDEVLYTALSRASETITFINTHSNNKEFLDKLDSTPYLKTLI 1007

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG++ PP EP V     KTH+PV ND+  LE KIEAM DKD RELW G EKT
Sbjct: 1008 SGVREDEQAGREQPPPEPSVRDSPTKTHIPVANDSVQLEGKIEAMEDKDTRELWSGEEKT 1067

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF+ITI++RI++AT + N KA+   L+AGDLLFEAYA 
Sbjct: 1068 NLMQTQDPVVQLFPHQQAKDEALFKITINERIRLATPETNRKALTDTLNAGDLLFEAYAS 1127

Query: 543  FMRVPKE 563
            FM VPKE
Sbjct: 1128 FMNVPKE 1134


>gb|AGG13300.1| Replicase [Garlic virus C]
          Length = 1550

 Score =  273 bits (699), Expect = 1e-81
 Identities = 135/187 (72%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H++IVLD DTPLCS EVLYTA SRA+ TITF+NTHS + +FL KLD+TPYLKTLI
Sbjct: 948  GLTLPHLSIVLDKDTPLCSDEVLYTALSRASETITFINTHSNNKEFLDKLDSTPYLKTLI 1007

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG++ PP EP V     KTH+PV ND+  LE KIEAM DKD RELW G EKT
Sbjct: 1008 SGVREDEQAGREQPPPEPSVRDSPTKTHIPVANDSVQLEGKIEAMEDKDTRELWSGEEKT 1067

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF+ITI++RI++AT + N KA+   L+AGDLLFEAYA 
Sbjct: 1068 NLMQTQDPVVQLFPHQQAKDEALFKITINERIRLATPETNRKALTDTLNAGDLLFEAYAS 1127

Query: 543  FMRVPKE 563
            FM VPKE
Sbjct: 1128 FMNVPKE 1134


>ref|YP_009389473.1| RNA-dependent RNA polymerase [Vanilla latent virus]
 gb|ASJ78783.1| RNA-dependent RNA polymerase [Vanilla latent virus]
          Length = 1423

 Score =  272 bits (696), Expect = 3e-81
 Identities = 131/187 (70%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H+TI LD+DTPLCS EVLYTAFSRA+ +ITFVNT+SE+P FL KLDATPYLKTL+
Sbjct: 863  GLTLPHITIALDSDTPLCSDEVLYTAFSRASESITFVNTYSENPDFLAKLDATPYLKTLL 922

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG D  P EP+V +P +KTHLPV N  TFLE K+E   DKD RELWDG EKT
Sbjct: 923  SGVREDEEAGSDLKPAEPEVREPQIKTHLPVTNTDTFLESKVEKTEDKDTRELWDGSEKT 982

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NL QTQDPV+Q+FPHQQAKDEALF++TI +RIK A+ +EN K +   ++ G+LLFEAYA 
Sbjct: 983  NLAQTQDPVIQMFPHQQAKDEALFKLTIQQRIKTASPEENRKELSQTINVGNLLFEAYAD 1042

Query: 543  FMRVPKE 563
            FM+VPKE
Sbjct: 1043 FMKVPKE 1049


>gb|ABQ96641.1| replicase, partial [Garlic virus B1]
          Length = 820

 Score =  265 bits (676), Expect = 1e-80
 Identities = 132/187 (70%), Positives = 149/187 (79%)
 Frame = +3

Query: 3   GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
           GLTL H+TIVLD DTPLCS EVLYTA SRA+ TITFVNTHS +  FL KLD+TPYLKTLI
Sbjct: 216 GLTLPHLTIVLDKDTPLCSDEVLYTALSRASETITFVNTHSNNKDFLAKLDSTPYLKTLI 275

Query: 183 SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
           SGVREDE AGKD  P EP V     KTH+PV ND   L+ KIEAM DKD RELW G EKT
Sbjct: 276 SGVREDEQAGKDNTPPEPVVRDGPTKTHIPVANDKIQLDDKIEAMEDKDTRELWSGEEKT 335

Query: 363 NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
           NLMQTQDP +QLFPHQQAKDEALF+ITI++RI++A  + N KA+   ++AGDLLFEAYA 
Sbjct: 336 NLMQTQDPTIQLFPHQQAKDEALFKITINERIRLAAPETNRKALKDTINAGDLLFEAYAS 395

Query: 543 FMRVPKE 563
           FM VP+E
Sbjct: 396 FMNVPRE 402


>gb|AHB33487.1| replicase [Garlic virus A]
          Length = 1612

 Score =  269 bits (688), Expect = 4e-80
 Identities = 132/187 (70%), Positives = 152/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTLNH+TIVLD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P+FL KLD TPYLKTLI
Sbjct: 1010 GLTLNHLTIVLDKDTPLCSEEVLYTAFSRASESITFVNTHSDNPEFLAKLDTTPYLKTLI 1069

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            S VREDE AG   PP EP V     KTH+PV ND   L+ K+E M DKD RELW G EKT
Sbjct: 1070 SWVREDEQAGASEPPPEPNVRDEPTKTHIPVTNDRVQLDDKVETMEDKDTRELWSGEEKT 1129

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQAKDEALF+ITI++RI+ A  ++N K++   L+AGDLLFEAYA+
Sbjct: 1130 NLMQTQDPVVQLFPHQQAKDEALFKITINERIRTANPEKNAKSLQQTLNAGDLLFEAYAQ 1189

Query: 543  FMRVPKE 563
            FM+VP E
Sbjct: 1190 FMKVPAE 1196


>gb|APG31855.1| RdRp [Arachis pintoi virus]
          Length = 1392

 Score =  268 bits (686), Expect = 6e-80
 Identities = 132/187 (70%), Positives = 153/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLT++ VTI LD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P FL KLD+TPYLKTLI
Sbjct: 832  GLTISDVTIALDNDTPLCSNEVLYTAFSRASESITFVNTHSDNPDFLAKLDSTPYLKTLI 891

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            +GVREDE AG   PP E    +P VKTHLPV N    LE KIEA+ DKD RELWDG+EKT
Sbjct: 892  TGVREDEKAGHAEPPAEAAPQEPEVKTHLPVANGNVALEEKIEAVEDKDTRELWDGQEKT 951

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPV+QLFPHQQAKDE LF++TI+KRI+ A+  EN +AI+   +AGDLLFEAYA 
Sbjct: 952  NLMQTQDPVIQLFPHQQAKDEPLFKLTIEKRIRTASASENQRAIIKSCNAGDLLFEAYAD 1011

Query: 543  FMRVPKE 563
            FM+VPKE
Sbjct: 1012 FMKVPKE 1018


>gb|AGG13294.1| Replicase [Garlic virus C]
          Length = 1529

 Score =  268 bits (686), Expect = 7e-80
 Identities = 132/187 (70%), Positives = 153/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H+TIVLD DTPLCS EVLYTA SRA+ TITFVNTHS + +FL KLD+TPYLKTLI
Sbjct: 927  GLTLPHLTIVLDKDTPLCSDEVLYTALSRASETITFVNTHSNNKEFLDKLDSTPYLKTLI 986

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG++ PP EP V +   KTH+P+ N+   LE KIE M DKD RELW G EKT
Sbjct: 987  SGVREDEEAGREQPPPEPVVREGPTKTHIPISNNNVQLENKIETMEDKDTRELWSGEEKT 1046

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPV+QLFPHQQAKDEALFRITI++RI++AT + N +A+   L+AGDLLFEAYA 
Sbjct: 1047 NLMQTQDPVIQLFPHQQAKDEALFRITINERIRLATPEANKRALTETLNAGDLLFEAYAS 1106

Query: 543  FMRVPKE 563
            FM VP+E
Sbjct: 1107 FMNVPRE 1113


>ref|YP_009328892.1| RdRp [Arachis pintoi virus]
 gb|APG31850.1| RdRp [Arachis pintoi virus]
          Length = 1392

 Score =  268 bits (685), Expect = 8e-80
 Identities = 132/187 (70%), Positives = 152/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLT++ VTI LD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P FL KLD+TPYLKTLI
Sbjct: 832  GLTISDVTIALDNDTPLCSNEVLYTAFSRASESITFVNTHSDNPDFLAKLDSTPYLKTLI 891

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            +GVREDE AG   PP E    +P VKTHLPV N    LE KIEA+ DKD RELWDG+EKT
Sbjct: 892  TGVREDERAGHAEPPAETTPQEPEVKTHLPVTNGDVALEEKIEAVEDKDTRELWDGQEKT 951

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDP++QLFPHQQAKDE LF++TI+KRI+ A+  EN KAI    +AGDLLFEAYA 
Sbjct: 952  NLMQTQDPIIQLFPHQQAKDEPLFKLTIEKRIRTASASENQKAIAKSCNAGDLLFEAYAD 1011

Query: 543  FMRVPKE 563
            FM+VPKE
Sbjct: 1012 FMKVPKE 1018


>ref|NP_569126.1| replicase [Garlic virus A]
 dbj|BAA61806.1| replicase [Garlic virus A]
          Length = 1625

 Score =  268 bits (685), Expect = 9e-80
 Identities = 131/187 (70%), Positives = 152/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTLNH+TIVLD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P+FL KLDATPYLKTLI
Sbjct: 1023 GLTLNHLTIVLDKDTPLCSEEVLYTAFSRASESITFVNTHSDNPEFLAKLDATPYLKTLI 1082

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            S VREDE AG   PP EP V     KTH+PV ND   L+ K+E M DKD RELW G EKT
Sbjct: 1083 SWVREDEQAGSSNPPPEPNVRDEPTKTHIPVTNDRVQLDDKVETMEDKDTRELWSGEEKT 1142

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDP+VQLFPHQQ+KDEALF+ITI +RI+ A  ++N K++   L+AGDLLFEAYA+
Sbjct: 1143 NLMQTQDPIVQLFPHQQSKDEALFKITIGERIRTADPEKNAKSLQHTLNAGDLLFEAYAQ 1202

Query: 543  FMRVPKE 563
            FM+VP E
Sbjct: 1203 FMKVPAE 1209


>gb|AGC09141.1| Replicase [Garlic virus A]
          Length = 1604

 Score =  268 bits (685), Expect = 9e-80
 Identities = 130/187 (69%), Positives = 154/187 (82%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTLNH+TIVLD DTPLCS EVLYTAFSRA+ +ITFVNTHS++P+FL KLDATPYLKTLI
Sbjct: 1002 GLTLNHLTIVLDKDTPLCSEEVLYTAFSRASESITFVNTHSDNPEFLAKLDATPYLKTLI 1061

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            S VREDE AG  +PP EP V     KTH+PV ND   L+ K+E M DKD RELW G EKT
Sbjct: 1062 SWVREDEQAGCSSPPPEPNVRDEPTKTHIPVTNDKVQLDDKVETMEDKDTRELWSGEEKT 1121

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDP+VQLFPHQQ+KDEALF+IT+++RI+ A  ++N K++   L+AGDLLFEAYA+
Sbjct: 1122 NLMQTQDPIVQLFPHQQSKDEALFKITMNERIRTANPEKNAKSLQHTLNAGDLLFEAYAQ 1181

Query: 543  FMRVPKE 563
            FM+VP E
Sbjct: 1182 FMKVPAE 1188


>gb|AEV51816.1| replicase, partial [Garlic virus C]
          Length = 1352

 Score =  267 bits (683), Expect = 1e-79
 Identities = 131/187 (70%), Positives = 153/187 (81%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H+TIVLD DTPLCS EVLYTA SRA+ TITFVNTHS + +FL KLD+TPYLKTLI
Sbjct: 750  GLTLPHLTIVLDKDTPLCSDEVLYTALSRASETITFVNTHSNNKEFLDKLDSTPYLKTLI 809

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG++ PP EP V +   KTH+P+ N+   LE KIE M DKD RELW G EKT
Sbjct: 810  SGVREDEEAGREQPPPEPVVREGPTKTHIPISNNNVQLENKIETMEDKDTRELWSGEEKT 869

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPV+QLFPHQQAKDEALF+ITI++RI++AT + N +A+   L+AGDLLFEAYA 
Sbjct: 870  NLMQTQDPVIQLFPHQQAKDEALFKITINERIRLATPEANKRALTETLNAGDLLFEAYAS 929

Query: 543  FMRVPKE 563
            FM VP+E
Sbjct: 930  FMNVPRE 936


>gb|AGG13306.1| Replicase [Garlic virus X]
          Length = 1543

 Score =  265 bits (676), Expect = 1e-78
 Identities = 132/187 (70%), Positives = 149/187 (79%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H+TIVLD DTPLCS EVLYTA SRA+ TITFVNTHS +  FL KLD+TPYLKTLI
Sbjct: 939  GLTLPHLTIVLDKDTPLCSDEVLYTALSRASETITFVNTHSNNKDFLDKLDSTPYLKTLI 998

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE AG +  P EP V     KTH+PV ND   LE KIE M DKD RELW G EKT
Sbjct: 999  SGVREDEQAGAEQTPPEPTVRDAPTKTHIPVANDKVQLEEKIETMEDKDTRELWSGEEKT 1058

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDP++QLFPHQQAKDEALF+ITI++RI++AT + N KA+   L+AGDLLFEAYA 
Sbjct: 1059 NLMQTQDPIIQLFPHQQAKDEALFKITINERIRLATPEANCKALKETLNAGDLLFEAYAD 1118

Query: 543  FMRVPKE 563
            FM VP+E
Sbjct: 1119 FMNVPRE 1125


>ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E]
 emb|CAC83705.1| hypothetical protein [Garlic virus E]
          Length = 1557

 Score =  265 bits (676), Expect = 1e-78
 Identities = 135/187 (72%), Positives = 149/187 (79%)
 Frame = +3

Query: 3    GLTLNHVTIVLDADTPLCSPEVLYTAFSRAASTITFVNTHSEHPQFLRKLDATPYLKTLI 182
            GLTL H+TIVLD DTPLCS EVLYTA SRA+ TITFVNTHS++ +FL KLDATPYLKTLI
Sbjct: 952  GLTLPHLTIVLDKDTPLCSDEVLYTALSRASETITFVNTHSDNKEFLAKLDATPYLKTLI 1011

Query: 183  SGVREDENAGKDAPPEEPQVPKPNVKTHLPVENDATFLEPKIEAMLDKDVRELWDGREKT 362
            SGVREDE +G D  P EPQV     KTH+PV N+   LE KIE M DKD RELW G EKT
Sbjct: 1012 SGVREDEQSGGDYQPPEPQVRDGPTKTHMPVANNNIQLEEKIETMEDKDTRELWSGEEKT 1071

Query: 363  NLMQTQDPVVQLFPHQQAKDEALFRITIDKRIKIATVDENTKAIVGRLHAGDLLFEAYAK 542
            NLMQTQDPVVQLFPHQQ+KDEALF+ITI +RI+ A V  N KA+   L AGDLLFEAYAK
Sbjct: 1072 NLMQTQDPVVQLFPHQQSKDEALFKITIKERIRTADVGTNKKALCETLSAGDLLFEAYAK 1131

Query: 543  FMRVPKE 563
            FM VP+E
Sbjct: 1132 FMNVPQE 1138