BLASTX nr result
ID: Ophiopogon26_contig00033558
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00033558
(483 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020276474.1| putative E3 ubiquitin-protein ligase LIN-1 i... 107 4e-24
ref|XP_020276473.1| putative E3 ubiquitin-protein ligase LIN-1 i... 107 4e-24
ref|XP_022760584.1| putative E3 ubiquitin-protein ligase LIN-1 i... 92 1e-18
ref|XP_022760583.1| putative E3 ubiquitin-protein ligase LIN-1 i... 92 1e-18
emb|CBI23000.3| unnamed protein product, partial [Vitis vinifera] 92 2e-18
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig... 92 2e-18
ref|XP_019075751.1| PREDICTED: putative E3 ubiquitin-protein lig... 92 2e-18
ref|XP_010649586.1| PREDICTED: putative E3 ubiquitin-protein lig... 92 2e-18
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera] 92 2e-18
gb|EOY06541.1| Nucleotide binding protein, putative isoform 2 [T... 91 4e-18
gb|EOY06540.1| Nucleotide binding protein, putative isoform 1 [T... 91 4e-18
gb|PPD84132.1| hypothetical protein GOBAR_DD18920 [Gossypium bar... 91 4e-18
ref|XP_016718872.1| PREDICTED: putative E3 ubiquitin-protein lig... 91 4e-18
ref|XP_017975655.1| PREDICTED: putative E3 ubiquitin-protein lig... 91 4e-18
ref|XP_017975654.1| PREDICTED: putative E3 ubiquitin-protein lig... 91 4e-18
emb|CDO98856.1| unnamed protein product [Coffea canephora] 91 5e-18
ref|XP_015693209.1| PREDICTED: putative E3 ubiquitin-protein lig... 90 9e-18
dbj|GAV74923.1| WD40 domain-containing protein [Cephalotus folli... 89 2e-17
ref|XP_017611383.1| PREDICTED: putative E3 ubiquitin-protein lig... 89 2e-17
ref|XP_017611382.1| PREDICTED: putative E3 ubiquitin-protein lig... 89 2e-17
>ref|XP_020276474.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Asparagus
officinalis]
Length = 1057
Score = 107 bits (268), Expect = 4e-24
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +3
Query: 114 VGPNSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKT 293
VG NSKR FREEAMQ+LLETV +DNS+AQ LSA ILSN+GGTYSW GESYTAAWLAKKT
Sbjct: 539 VGSNSKRRFREEAMQVLLETVTCEDNSNAQLLSALILSNVGGTYSWTGESYTAAWLAKKT 598
Query: 294 GLTS 305
GLTS
Sbjct: 599 GLTS 602
>ref|XP_020276473.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Asparagus
officinalis]
gb|ONK62926.1| uncharacterized protein A4U43_C07F9550 [Asparagus officinalis]
Length = 1300
Score = 107 bits (268), Expect = 4e-24
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +3
Query: 114 VGPNSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKT 293
VG NSKR FREEAMQ+LLETV +DNS+AQ LSA ILSN+GGTYSW GESYTAAWLAKKT
Sbjct: 782 VGSNSKRRFREEAMQVLLETVTCEDNSNAQLLSALILSNVGGTYSWTGESYTAAWLAKKT 841
Query: 294 GLTS 305
GLTS
Sbjct: 842 GLTS 845
>ref|XP_022760584.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Durio
zibethinus]
Length = 1353
Score = 92.4 bits (228), Expect = 1e-18
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = +3
Query: 129 KRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLTSL 308
K MFREEAM++LL+++ +++S++Q LSAFILSN+GGTYSW GESYT AWL KK GLTSL
Sbjct: 841 KSMFREEAMKVLLQSIASEESSNSQLLSAFILSNIGGTYSWTGESYTVAWLVKKAGLTSL 900
Query: 309 F 311
+
Sbjct: 901 Y 901
>ref|XP_022760583.1| putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Durio
zibethinus]
Length = 1354
Score = 92.4 bits (228), Expect = 1e-18
Identities = 41/61 (67%), Positives = 53/61 (86%)
Frame = +3
Query: 129 KRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLTSL 308
K MFREEAM++LL+++ +++S++Q LSAFILSN+GGTYSW GESYT AWL KK GLTSL
Sbjct: 842 KSMFREEAMKVLLQSIASEESSNSQLLSAFILSNIGGTYSWTGESYTVAWLVKKAGLTSL 901
Query: 309 F 311
+
Sbjct: 902 Y 902
>emb|CBI23000.3| unnamed protein product, partial [Vitis vinifera]
Length = 1274
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+ + MFREEAM++LLE++ ++NS+ Q LSAFILSNLGGTYSW GE YT AWL KK GLT
Sbjct: 760 SGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLT 819
Query: 303 SLF 311
SL+
Sbjct: 820 SLY 822
>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X3
[Vitis vinifera]
Length = 1339
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+ + MFREEAM++LLE++ ++NS+ Q LSAFILSNLGGTYSW GE YT AWL KK GLT
Sbjct: 825 SGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLT 884
Query: 303 SLF 311
SL+
Sbjct: 885 SLY 887
>ref|XP_019075751.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 isoform X2
[Vitis vinifera]
Length = 1354
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+ + MFREEAM++LLE++ ++NS+ Q LSAFILSNLGGTYSW GE YT AWL KK GLT
Sbjct: 842 SGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLT 901
Query: 303 SLF 311
SL+
Sbjct: 902 SLY 904
>ref|XP_010649586.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-2 isoform X1
[Vitis vinifera]
Length = 1356
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+ + MFREEAM++LLE++ ++NS+ Q LSAFILSNLGGTYSW GE YT AWL KK GLT
Sbjct: 842 SGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLT 901
Query: 303 SLF 311
SL+
Sbjct: 902 SLY 904
>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
Length = 1378
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+ + MFREEAM++LLE++ ++NS+ Q LSAFILSNLGGTYSW GE YT AWL KK GLT
Sbjct: 825 SGRSMFREEAMEVLLESMVCEENSATQILSAFILSNLGGTYSWTGEPYTVAWLVKKAGLT 884
Query: 303 SLF 311
SL+
Sbjct: 885 SLY 887
>gb|EOY06541.1| Nucleotide binding protein, putative isoform 2 [Theobroma cacao]
gb|EOY06542.1| Nucleotide binding protein, putative isoform 2 [Theobroma cacao]
Length = 940
Score = 90.9 bits (224), Expect = 4e-18
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+SK +FR+EAMQ+LL+++ +++S++Q LSAFILSN+GGTY+W GESYT AWL KK GLT
Sbjct: 426 SSKSVFRKEAMQVLLQSIASEESSNSQLLSAFILSNIGGTYAWTGESYTVAWLVKKAGLT 485
Query: 303 SLF 311
S++
Sbjct: 486 SMY 488
>gb|EOY06540.1| Nucleotide binding protein, putative isoform 1 [Theobroma cacao]
Length = 1082
Score = 90.9 bits (224), Expect = 4e-18
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+SK +FR+EAMQ+LL+++ +++S++Q LSAFILSN+GGTY+W GESYT AWL KK GLT
Sbjct: 568 SSKSVFRKEAMQVLLQSIASEESSNSQLLSAFILSNIGGTYAWTGESYTVAWLVKKAGLT 627
Query: 303 SLF 311
S++
Sbjct: 628 SMY 630
>gb|PPD84132.1| hypothetical protein GOBAR_DD18920 [Gossypium barbadense]
Length = 1284
Score = 90.9 bits (224), Expect = 4e-18
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +3
Query: 120 PNSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGL 299
P K +FREEAMQ+L +++ +++S+AQ LSAFILSN+GGTYSW GE YT AWL KK GL
Sbjct: 769 PKGKSLFREEAMQVLFQSIVLEESSTAQLLSAFILSNIGGTYSWTGEPYTIAWLVKKAGL 828
Query: 300 TSL 308
TSL
Sbjct: 829 TSL 831
>ref|XP_016718872.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Gossypium
hirsutum]
Length = 1290
Score = 90.9 bits (224), Expect = 4e-18
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +3
Query: 120 PNSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGL 299
P K +FREEAMQ+L +++ +++S+AQ LSAFILSN+GGTYSW GE YT AWL KK GL
Sbjct: 775 PKGKSLFREEAMQVLFQSIVLEESSTAQLLSAFILSNIGGTYSWTGEPYTIAWLVKKAGL 834
Query: 300 TSL 308
TSL
Sbjct: 835 TSL 837
>ref|XP_017975655.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Theobroma cacao]
Length = 1357
Score = 90.9 bits (224), Expect = 4e-18
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+SK +FR+EAMQ+LL+++ +++S++Q LSAFILSN+GGTY+W GESYT AWL KK GLT
Sbjct: 843 SSKSVFRKEAMQVLLQSIASEESSNSQLLSAFILSNIGGTYAWTGESYTVAWLVKKAGLT 902
Query: 303 SLF 311
S++
Sbjct: 903 SMY 905
>ref|XP_017975654.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Theobroma cacao]
Length = 1360
Score = 90.9 bits (224), Expect = 4e-18
Identities = 39/63 (61%), Positives = 55/63 (87%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+SK +FR+EAMQ+LL+++ +++S++Q LSAFILSN+GGTY+W GESYT AWL KK GLT
Sbjct: 846 SSKSVFRKEAMQVLLQSIASEESSNSQLLSAFILSNIGGTYAWTGESYTVAWLVKKAGLT 905
Query: 303 SLF 311
S++
Sbjct: 906 SMY 908
>emb|CDO98856.1| unnamed protein product [Coffea canephora]
Length = 1327
Score = 90.5 bits (223), Expect = 5e-18
Identities = 43/62 (69%), Positives = 53/62 (85%)
Frame = +3
Query: 123 NSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLT 302
+SK M+REEAM+ LLE++ ++NS+ QALSAFILSN+GGTYSW GE YT AWLAK+ GLT
Sbjct: 812 SSKLMYREEAMKELLESLISEENSAKQALSAFILSNIGGTYSWTGEPYTVAWLAKRAGLT 871
Query: 303 SL 308
SL
Sbjct: 872 SL 873
>ref|XP_015693209.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 [Oryza
brachyantha]
Length = 1091
Score = 89.7 bits (221), Expect = 9e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 120 PNSKRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGL 299
P+ K +FR+EAM++LL+++ +N S QAL+A LSNLGGTYSW GESYTAAWLAKK GL
Sbjct: 575 PDCKSVFRDEAMEVLLDSLSSQENCSVQALAASFLSNLGGTYSWSGESYTAAWLAKKAGL 634
Query: 300 TS 305
TS
Sbjct: 635 TS 636
>dbj|GAV74923.1| WD40 domain-containing protein [Cephalotus follicularis]
Length = 1309
Score = 89.0 bits (219), Expect = 2e-17
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +3
Query: 129 KRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLTSL 308
K +FREEAMQ+LLE V +++S+ Q LSAFILSN+GGTY+W GE YT AWL KK GLTS+
Sbjct: 797 KSLFREEAMQVLLEAVASEESSTMQLLSAFILSNIGGTYAWTGEPYTIAWLVKKAGLTSM 856
Query: 309 F 311
+
Sbjct: 857 Y 857
>ref|XP_017611383.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2
[Gossypium arboreum]
Length = 1209
Score = 88.6 bits (218), Expect = 2e-17
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +3
Query: 129 KRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLTSL 308
K +FREEAMQ+L +++ +++S+AQ LSAFILSN+GGTYSW GE YT AWL KK GLTSL
Sbjct: 778 KSVFREEAMQVLFQSIALEESSTAQQLSAFILSNIGGTYSWTGEPYTVAWLVKKAGLTSL 837
>ref|XP_017611382.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1
[Gossypium arboreum]
gb|KHG22392.1| Putative E3 ubiquitin-protein ligase LIN-1 [Gossypium arboreum]
Length = 1290
Score = 88.6 bits (218), Expect = 2e-17
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +3
Query: 129 KRMFREEAMQILLETVERDDNSSAQALSAFILSNLGGTYSWMGESYTAAWLAKKTGLTSL 308
K +FREEAMQ+L +++ +++S+AQ LSAFILSN+GGTYSW GE YT AWL KK GLTSL
Sbjct: 778 KSVFREEAMQVLFQSIALEESSTAQQLSAFILSNIGGTYSWTGEPYTVAWLVKKAGLTSL 837