BLASTX nr result

ID: Ophiopogon26_contig00033108 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00033108
         (635 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK62896.1| uncharacterized protein A4U43_C07F9250 [Asparagus...    57   2e-06

>gb|ONK62896.1| uncharacterized protein A4U43_C07F9250 [Asparagus officinalis]
          Length = 163

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 53/156 (33%), Positives = 63/156 (40%), Gaps = 27/156 (17%)
 Frame = -2

Query: 553 MGTEILRPHDCLNRQAXXXXXXXXXXXXXXXXXXXXXSAKHGGGG--GSFDMGRVKILKR 380
           MGTEIL P DCL R                        ++        +  MG+V ILK 
Sbjct: 1   MGTEILHPEDCLTRHLRKPHLHPNPNPNHHAKAFKKRRSRSRSRSPRSAKIMGQVTILKP 60

Query: 379 GEPL---DLWSVISEPKFSGSGRLAPDPDPDRIRIVAYAGPAXXXXXXXXXXXXXXXSWR 209
           GE L    + S+IS+PK  GSGRL PDPD  +I +VAYAG A               S R
Sbjct: 61  GESLFSSRIDSLISDPKVYGSGRLGPDPD--QIGVVAYAGSAFSTSPSPGSLPLPSFSRR 118

Query: 208 REEE----------------------GLVVDQSATK 167
           +EE                         VVDQSATK
Sbjct: 119 KEERFSTSPSPGSLPLPSFSRRKEERSSVVDQSATK 154


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