BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00032763
         (569 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     66   3e-09
gb|ONK75637.1| uncharacterized protein A4U43_C03F18970 [Asparagu...    59   9e-07

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
 Frame = +2

Query: 5   ESISHGDFEKKTGXXXXXXXXXXXXKT-----CSGRASLTCHNH---LLLPRRLASITLK 160
           ES+  GDF +K              KT     C  R S    +    L L   +AS    
Sbjct: 113 ESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQSKSSGLSLESNIASEAKM 172

Query: 161 DPLNQKQESFSLGELNKWSRRER*RLNFVKS-----VRGTNHMSEECPLLADPFQ-EQLN 322
             + ++ E+  + E      R   ++N + +      +   H+SEECPLL +    EQ+N
Sbjct: 173 ATILRRLEALEVKE------RAPAQINHISAPGCHNCQSPTHVSEECPLLGNNHALEQMN 226

Query: 323 TAINQQKHDSFGPSSNQ*WKNNLNLSWG*GHTHGYQ------------GANHRFQAPNYA 466
            A  + ++D F P+ N  W+N+ N +W  G++HG Q            G    F APN  
Sbjct: 227 AAFQRPRNDPFSPTYNPGWRNHPNFAWNQGNSHGNQNFIPASNQQFPRGNTVPFNAPNNF 286

Query: 467 PNGQFARAPMRPYQHMN 517
            N  F      P+QH N
Sbjct: 287 SNPPFPNQHPHPHQHTN 303


>gb|ONK75637.1| uncharacterized protein A4U43_C03F18970 [Asparagus officinalis]
          Length = 621

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
 Frame = +2

Query: 17  HGDFEKKTGXXXXXXXXXXXXKT-----CSGRASLTCHNH---LLLPRRLASITLKDPLN 172
           HGDF +K              KT     C  R S   H+    L L   +AS      + 
Sbjct: 3   HGDFMRKNADEAWEFLESLSEKTMQWEQCDDRVSSVPHSKSSGLSLESNIASEAKMATIL 62

Query: 173 QKQESFSLGELNKWSRRER*RLNFVK-----SVRGTNHMSEECPLLADPFQ-EQLNTAIN 334
           ++ E+  + E      R   +LN V      + +   H+SEECPLL +    EQ+N A  
Sbjct: 63  RRLEALEIKE------RAPAQLNHVSFPGCHNCQSPTHVSEECPLLGNNNAIEQMNAAFQ 116

Query: 335 QQKHDSFGPSSNQ*WKNNLNLSWG*GHTHGYQ----GANHRFQAPNYAP---NGQFARAP 493
             ++D F P+ N  W+N+ N +W  G++ G Q     +   F   N  P   + QF + P
Sbjct: 117 HPRNDPFSPTYNPGWRNHPNFAWNLGNSPGTQNFTPASTQHFPRGNTVPFNSHSQF-QQP 175

Query: 494 MRPYQHMN 517
             PYQ+ +
Sbjct: 176 NLPYQNQS 183