BLASTX nr result
ID: Ophiopogon26_contig00032591
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00032591
(1044 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 102 4e-38
gb|AFP55573.1| retrotransposon protein [Rosa rugosa] 100 9e-38
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 93 4e-37
gb|AQY61302.1| Pol [Vitis vinifera] 93 7e-37
gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinen... 99 7e-37
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 92 1e-36
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 92 1e-36
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 97 3e-36
gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana] 92 6e-36
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 93 6e-36
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 92 6e-36
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 92 6e-36
gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposo... 94 1e-35
gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposo... 92 3e-35
gb|AQY61295.1| Pol [Coffea arabica] 94 4e-35
gb|AQY61297.1| Pol [Coffea canephora] 94 5e-35
emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera] 92 2e-34
gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposo... 92 2e-34
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 92 9e-34
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 99 9e-34
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 102 bits (253), Expect(3) = 4e-38
Identities = 49/70 (70%), Positives = 62/70 (88%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
+ RY++ LVAQ FSQRP +DYEET+S V+D+ITFRYL+SLVV EKLD +LM V+TTYLYG
Sbjct: 1004 VVRYKSRLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTTYLYG 1063
Query: 523 NLDSEIHMKI 552
+LDSEI+MK+
Sbjct: 1064 DLDSEIYMKV 1073
Score = 71.2 bits (173), Expect(3) = 4e-38
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2
Query: 581 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLNGFVILA 760
+K R+ R K YGLK S RMWYN L +Y+ +GY NN IC C+FIK+ +GF I+A
Sbjct: 1085 SKPRSAFSIRLKHSLYGLKQSGRMWYNRLSDYLIGKGYINNEICPCVFIKRTSSGFAIVA 1144
Query: 761 VYVDNI 778
VYVD++
Sbjct: 1145 VYVDDM 1150
Score = 35.4 bits (80), Expect(3) = 4e-38
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 1151 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 1178
>gb|AFP55573.1| retrotransposon protein [Rosa rugosa]
Length = 2242
Score = 100 bits (248), Expect(3) = 9e-38
Identities = 48/70 (68%), Positives = 61/70 (87%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
+ RY+A LVAQ FSQRP +DY+ET+S V+D+ITFRYL+SLVV EKLD +LM V+T YLYG
Sbjct: 1006 VVRYKARLVAQGFSQRPGIDYDETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYG 1065
Query: 523 NLDSEIHMKI 552
+LDSEI+MK+
Sbjct: 1066 DLDSEIYMKV 1075
Score = 72.0 bits (175), Expect(3) = 9e-38
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +2
Query: 581 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLNGFVILA 760
+K R+ R KR YGLK S RMWYN L +Y+ +GY N+ IC C+FIK+ +GF I+A
Sbjct: 1087 SKPRSAFSIRLKRSLYGLKQSRRMWYNRLSDYLIGKGYINDEICPCVFIKRTSSGFAIVA 1146
Query: 761 VYVDNI 778
VYVD++
Sbjct: 1147 VYVDDM 1152
Score = 35.4 bits (80), Expect(3) = 9e-38
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 1153 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 1180
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 93.2 bits (230), Expect(3) = 4e-37
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +DYEET+S V+D ITFR+LISL V E LD RLM V+T YLYG
Sbjct: 876 IIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLYG 935
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 936 SMDNDIYMKI 945
Score = 78.6 bits (192), Expect(3) = 4e-37
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L K RN + + +R YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 948 GFKLPDANNTKPRNMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1007
Query: 734 FLNGFVILAVYVDNI 778
GF I+AVYVD++
Sbjct: 1008 SETGFAIIAVYVDDL 1022
Score = 33.5 bits (75), Expect(3) = 4e-37
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +++ + T +YLKKEFEM DL +T
Sbjct: 1023 NLVGTPEDLTR--TTNYLKKEFEMKDLGKT 1050
>gb|AQY61302.1| Pol [Vitis vinifera]
Length = 1223
Score = 92.8 bits (229), Expect(3) = 7e-37
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +DYEET+S V+D ITFR+LISL + E LD RLM V+T YLYG
Sbjct: 739 IIRYKARLVAQGFSQRPGIDYEETYSPVMDTITFRFLISLAISEGLDMRLMDVITAYLYG 798
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 799 SMDNDIYMKI 808
Score = 77.0 bits (188), Expect(3) = 7e-37
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L+ K R+ + + +R YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 811 GFKLSDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 870
Query: 734 FLNGFVILAVYVDNI 778
GF I+AVYVD++
Sbjct: 871 SETGFAIIAVYVDDL 885
Score = 34.7 bits (78), Expect(3) = 7e-37
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 886 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 913
>gb|PRQ29277.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 725
Score = 99.0 bits (245), Expect(3) = 7e-37
Identities = 48/70 (68%), Positives = 60/70 (85%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
+ RY+A LVAQ FSQRP +DYEET+ V+D+ITFRYL+SLVV EKLD +LM V+T YLYG
Sbjct: 223 VVRYKARLVAQGFSQRPGIDYEETYYPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYG 282
Query: 523 NLDSEIHMKI 552
+LDSEI+MK+
Sbjct: 283 DLDSEIYMKV 292
Score = 70.1 bits (170), Expect(3) = 7e-37
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2
Query: 581 NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLNGFVILA 760
+K R+ R +R YGLK S RMWYN L +Y+ +GY N+ IC C+FIK+ +GF I+A
Sbjct: 304 SKPRSAFSIRLRRSLYGLKQSGRMWYNRLSDYLIGKGYVNDEICPCVFIKRTSSGFAIVA 363
Query: 761 VYVDNI 778
VYVD++
Sbjct: 364 VYVDDM 369
Score = 35.4 bits (80), Expect(3) = 7e-37
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NLIG+ E+K+ TA YLK EFEM DL +T
Sbjct: 370 NLIGTLDELKE--TAKYLKSEFEMKDLGKT 397
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 92.4 bits (228), Expect(3) = 1e-36
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ SQRP +DYEET+S V+D ITFR+LISL V E LD RLM V+TTYLYG
Sbjct: 1012 IIRYKARLVAQGXSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITTYLYG 1071
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 1072 SMDNDIYMKI 1081
Score = 76.6 bits (187), Expect(3) = 1e-36
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L K R+ + + +R YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 1084 GFELPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1143
Query: 734 FLNGFVILAVYVDNI 778
GF I+AVYVD++
Sbjct: 1144 SETGFAIIAVYVDDL 1158
Score = 34.7 bits (78), Expect(3) = 1e-36
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 1159 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 1186
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 91.7 bits (226), Expect(3) = 1e-36
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +DYEET+S ++D ITFR+LISL V E LD LM V+TTYLYG
Sbjct: 228 IIRYKARLVAQGFSQRPGIDYEETYSPIMDAITFRFLISLAVLEGLDMCLMDVITTYLYG 287
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 288 SMDNDIYMKI 297
Score = 77.0 bits (188), Expect(3) = 1e-36
Identities = 39/75 (52%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L + K R+ + + +R YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 300 GFKLPEANNTKPRSMYSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYVNNPICPCIFIKK 359
Query: 734 FLNGFVILAVYVDNI 778
GF I+AVYVD++
Sbjct: 360 SETGFAIIAVYVDDL 374
Score = 35.0 bits (79), Expect(3) = 1e-36
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 375 NLVGTSEELTR--TTNYLKKEFEMKDLGKT 402
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 97.4 bits (241), Expect(3) = 3e-36
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP VDYEET+S VID ITFR+LISL V E LD RLM+V+TTYLYG
Sbjct: 201 IIRYKARLVAQGFSQRPGVDYEETYSPVIDAITFRFLISLAVSEGLDMRLMNVITTYLYG 260
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 261 SIDNDIYMKI 270
Score = 73.9 bits (180), Expect(3) = 3e-36
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L + K R+ + + ++ YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 273 GFKLLEANNTKPRSIYSIKLQQSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 332
Query: 734 FLNGFVILAVYVDNI 778
FVI+AVYVD++
Sbjct: 333 SETRFVIIAVYVDDL 347
Score = 31.2 bits (69), Expect(3) = 3e-36
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ KE+ + +YL KEFEM DL +T
Sbjct: 348 NLVGTPKELIR--ITNYLNKEFEMKDLGKT 375
>gb|AQY61293.1| Gag-Pol [Arabidopsis thaliana]
Length = 1552
Score = 91.7 bits (226), Expect(3) = 6e-36
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I R++A LVAQ FSQRP VDYEET+S V+D TFRYLISL + E LD RLM V+T YLYG
Sbjct: 1077 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 1136
Query: 523 NLDSEIHMKI 552
LD+EI+M++
Sbjct: 1137 PLDNEIYMRL 1146
Score = 77.0 bits (188), Expect(3) = 6e-36
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 578 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLN-GFVI 754
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I C+FIKKF + GFVI
Sbjct: 1157 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 1216
Query: 755 LAVYVDNI 778
+AVYVD++
Sbjct: 1217 IAVYVDDL 1224
Score = 32.7 bits (73), Expect(3) = 6e-36
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 1225 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 1252
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 93.2 bits (230), Expect(3) = 6e-36
Identities = 47/70 (67%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +DYEET+S V+D ITFR+LISL V E LD RLM V+T YLYG
Sbjct: 896 IIRYKARLVAQGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLDMRLMDVITAYLYG 955
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 956 SMDNDIYMKI 965
Score = 73.6 bits (179), Expect(3) = 6e-36
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L K R+ + + +R YGLK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 968 GFKLPDANNTKPRSMYSIKLQRSLYGLKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1027
Query: 734 FLNGFVILAVYVDNI 778
F I+AVYVD++
Sbjct: 1028 SETRFAIIAVYVDDL 1042
Score = 34.7 bits (78), Expect(3) = 6e-36
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +E+ + T +YLKKEFEM DL +T
Sbjct: 1043 NLVGTPEELTR--TTNYLKKEFEMKDLGKT 1070
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 91.7 bits (226), Expect(3) = 6e-36
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I R++A LVAQ FSQRP VDYEET+S V+D TFRYLISL + E LD RLM V+T YLYG
Sbjct: 668 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 727
Query: 523 NLDSEIHMKI 552
LD+EI+M++
Sbjct: 728 PLDNEIYMRL 737
Score = 77.0 bits (188), Expect(3) = 6e-36
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 578 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLN-GFVI 754
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I C+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRMNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 755 LAVYVDNI 778
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 32.7 bits (73), Expect(3) = 6e-36
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 816 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 843
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 91.7 bits (226), Expect(3) = 6e-36
Identities = 46/70 (65%), Positives = 56/70 (80%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I R++A LVAQ FSQRP VDYEET+S V+D TFRYLISL + E LD RLM V+T YLYG
Sbjct: 668 IVRHKARLVAQGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLDLRLMDVVTAYLYG 727
Query: 523 NLDSEIHMKI 552
LD+EI+M++
Sbjct: 728 PLDNEIYMRL 737
Score = 77.0 bits (188), Expect(3) = 6e-36
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +2
Query: 578 QNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLN-GFVI 754
+N R+ +C R R YGLK S RMWYN L EY+ +EGY N+ I C+FIKKF + GFVI
Sbjct: 748 KNGSRDQYCIRLNRSLYGLKQSGRMWYNRLSEYLVKEGYKNDPISPCIFIKKFASKGFVI 807
Query: 755 LAVYVDNI 778
+AVYVD++
Sbjct: 808 IAVYVDDL 815
Score = 32.7 bits (73), Expect(3) = 6e-36
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N++G+ EI + T YLKKEFEM DL +T
Sbjct: 816 NILGTSGEIAQ--TVEYLKKEFEMKDLGKT 843
>gb|KYP47392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 814
Score = 94.0 bits (232), Expect(3) = 1e-35
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +D+EET+S V+D TFRYLISLVV EKL+ LM V+TTYLYG
Sbjct: 337 IVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLYG 396
Query: 523 NLDSEIHMKI 552
+LD++I+MK+
Sbjct: 397 SLDADIYMKL 406
Score = 75.5 bits (184), Expect(3) = 1e-35
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +2
Query: 563 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFL 739
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ IC C+FIK+
Sbjct: 409 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 468
Query: 740 NGFVILAVYVDNI 778
NGF I+ VYVD+I
Sbjct: 469 NGFAIIVVYVDDI 481
Score = 30.8 bits (68), Expect(3) = 1e-35
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N+IG+ KE+ K LKKEFEM DL T
Sbjct: 482 NIIGTPKELSK--AIDCLKKEFEMKDLGRT 509
>gb|KYP54831.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 834
Score = 92.0 bits (227), Expect(3) = 3e-35
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +D+EET+S V+D TFRYLISLVV EKL+ LM V+T YLYG
Sbjct: 467 IVRYKARLVAQGFSQRPGIDFEETYSPVVDANTFRYLISLVVHEKLNLHLMDVVTAYLYG 526
Query: 523 NLDSEIHMKI 552
+LD++I+MK+
Sbjct: 527 SLDADIYMKL 536
Score = 75.5 bits (184), Expect(3) = 3e-35
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +2
Query: 563 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFL 739
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ IC C+FIK+
Sbjct: 539 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSQ 598
Query: 740 NGFVILAVYVDNI 778
NGF I+ VYVD+I
Sbjct: 599 NGFAIIVVYVDDI 611
Score = 31.6 bits (70), Expect(3) = 3e-35
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSETD 870
N+IG+ KE+ K LKKEFEM DL T+
Sbjct: 612 NIIGTPKELSK--AIDCLKKEFEMKDLGRTE 640
>gb|AQY61295.1| Pol [Coffea arabica]
Length = 1160
Score = 94.0 bits (232), Expect(3) = 4e-35
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YLYG
Sbjct: 685 IVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLYG 744
Query: 523 NLDSEIHMKI 552
NL+++I+M+I
Sbjct: 745 NLENDIYMRI 754
Score = 73.9 bits (180), Expect(3) = 4e-35
Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +2
Query: 554 IS*GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMF 724
IS GFN+ + + +N + + ++ YGLK S RMWYN L E +++EGY N+ IC C+F
Sbjct: 754 ISEGFNMPEACKSNPKNIYSIKLQKSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVF 813
Query: 725 IKKFLNGFVILAVYVDNI 778
IKK + FVI+AVYVD++
Sbjct: 814 IKKNGSNFVIIAVYVDDL 831
Score = 30.8 bits (68), Expect(3) = 4e-35
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NLIG+ +EI+ + YLKKEFE+ D +T
Sbjct: 832 NLIGTLEEIQN--SVEYLKKEFEIKDFGKT 859
>gb|AQY61297.1| Pol [Coffea canephora]
Length = 1045
Score = 94.0 bits (232), Expect(3) = 5e-35
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP DY+ET+S V+D ITFRYL+S V EKLD RLM V+T YLYG
Sbjct: 570 IVRYKARLVAQGFSQRPGFDYDETYSPVVDAITFRYLVSFAVHEKLDMRLMDVVTAYLYG 629
Query: 523 NLDSEIHMKI 552
NL+++I+M+I
Sbjct: 630 NLENDIYMRI 639
Score = 73.6 bits (179), Expect(3) = 5e-35
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNLTQ---NKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GFN+ + + +N + + +R YGLK S RMWYN L E +++EGY N+ IC C+FIKK
Sbjct: 642 GFNMPEACKSNPKNIYSIKLQRSLYGLKQSGRMWYNRLNECLTKEGYTNDPICPCVFIKK 701
Query: 734 FLNGFVILAVYVDNI 778
+ FVI+AVYVD++
Sbjct: 702 NGSNFVIIAVYVDDL 716
Score = 30.8 bits (68), Expect(3) = 5e-35
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NLIG+ +EI+ + YLKKEFE+ D +T
Sbjct: 717 NLIGTPEEIQN--SVEYLKKEFEIKDFGKT 744
>emb|CAN71782.1| hypothetical protein VITISV_028677 [Vitis vinifera]
Length = 1383
Score = 91.7 bits (226), Expect(3) = 2e-34
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LV Q FSQRP +DYEET+S V++ ITFR+LISL V E LD RLM V+TTYLYG
Sbjct: 940 IIRYKARLVVQGFSQRPGIDYEETYSPVMNAITFRFLISLAVSEGLDIRLMDVITTYLYG 999
Query: 523 NLDSEIHMKI 552
++D++I+MKI
Sbjct: 1000 SMDNDIYMKI 1009
Score = 72.0 bits (175), Expect(3) = 2e-34
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 GFNL---TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKK 733
GF L K R+ + + +R Y LK S RMWYN L EY+ +EGY NN IC C+FIKK
Sbjct: 1012 GFKLPDANNTKPRSMYSIKLQRSLYELKQSGRMWYNRLSEYLLKEGYVNNPICPCIFIKK 1071
Query: 734 FLNGFVILAVYVDNI 778
GF I+ VYVD++
Sbjct: 1072 SETGFAIIVVYVDDL 1086
Score = 32.7 bits (73), Expect(3) = 2e-34
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
NL+G+ +E+ + T +YLK EFEM DL +T
Sbjct: 1087 NLVGTPEELTR--TTNYLKNEFEMKDLGKT 1114
>gb|KYP69371.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 321
Score = 91.7 bits (226), Expect(3) = 2e-34
Identities = 46/70 (65%), Positives = 58/70 (82%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
I RY+A LVAQ FSQRP +D+EE +S V+D TFRYLISLVV EKL+ LM V+TTYLYG
Sbjct: 95 IVRYKARLVAQGFSQRPGIDFEEIYSPVVDANTFRYLISLVVHEKLNLHLMDVVTTYLYG 154
Query: 523 NLDSEIHMKI 552
+LD++I+MK+
Sbjct: 155 SLDADIYMKL 164
Score = 75.1 bits (183), Expect(3) = 2e-34
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +2
Query: 563 GFNLTQNKY-RNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFL 739
GFNL + R + + + YGLK S RMWYN L EY+ +EGY N+ IC C+FIK+
Sbjct: 167 GFNLPDDAISREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLQEGYKNDPICPCIFIKRSE 226
Query: 740 NGFVILAVYVDNI 778
NGF I+ VYVD+I
Sbjct: 227 NGFAIIVVYVDDI 239
Score = 29.3 bits (64), Expect(3) = 2e-34
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N+IG+ +E+ K LKKEFEM DL T
Sbjct: 240 NIIGTPEELSK--VIDCLKKEFEMKDLGRT 267
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 91.7 bits (226), Expect(3) = 9e-34
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +1
Query: 343 IQRYEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYG 522
+ RY+A LVAQ FSQRP +DY ET+S V+D ITFRYLI+L V EKL+ RLM V+T YLYG
Sbjct: 429 VMRYKARLVAQGFSQRPGIDYMETYSPVVDAITFRYLINLAVYEKLEMRLMDVVTAYLYG 488
Query: 523 NLDSEIHMKI 552
+LD I MKI
Sbjct: 489 SLDHNIFMKI 498
Score = 71.6 bits (174), Expect(3) = 9e-34
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +2
Query: 575 TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLNGFVI 754
T R T + ++ YGLK S RMWYN L EY+ ++GY N+SIC C+FIK+ + FVI
Sbjct: 507 TYKDSRETCSIKLQKSLYGLKQSGRMWYNRLSEYLLKKGYKNDSICPCIFIKRLGSEFVI 566
Query: 755 LAVYVDNI 778
+AVYVD++
Sbjct: 567 IAVYVDDL 574
Score = 30.8 bits (68), Expect(3) = 9e-34
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 778 NLIGSRKEIKKKKTASYLKKEFEMNDLSET 867
N+IG+RKE+ + LK+EFEM DL +T
Sbjct: 575 NIIGTRKELLE--AVECLKREFEMKDLGKT 602
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 99.0 bits (245), Expect(2) = 9e-34
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +1
Query: 352 YEAYLVAQRFSQRPRVDYEETHSLVIDIITFRYLISLVV*EKLDTRLMHVMTTYLYGNLD 531
Y+A LVAQ FSQRP +DYEET+S V+D+ITFRYL+SLVV EKLD +LM V+T YLYG+LD
Sbjct: 375 YKARLVAQGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLDMQLMDVVTAYLYGDLD 434
Query: 532 SEIHMKI 552
SEI+MK+
Sbjct: 435 SEIYMKV 441
Score = 74.7 bits (182), Expect(2) = 9e-34
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 575 TQNKYRNTHCNR*KRVTYGLK*SERMWYNMLREYISREGYDNNSICSCMFIKKFLNGFVI 754
+ +K R+ + R +R YGLK S RMWY L +Y+ REGY N+ +C C+FIKK +GF I
Sbjct: 451 SNSKPRSAYAIRLQRSLYGLKQSGRMWYTRLSDYLIREGYKNDELCPCVFIKKTSSGFAI 510
Query: 755 LAVYVDNI 778
+AVYVD++
Sbjct: 511 VAVYVDDM 518