BLASTX nr result

ID: Ophiopogon26_contig00032506 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00032506
         (597 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA66517.1| Putative F-box/LRR-repeat protein [Apostasia shen...    60   6e-07
gb|OAO91990.1| hypothetical protein AXX17_AT5G56030 [Arabidopsis...    57   4e-06

>gb|PKA66517.1| Putative F-box/LRR-repeat protein [Apostasia shenzhenica]
          Length = 514

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/58 (53%), Positives = 39/58 (67%)
 Frame = +3

Query: 408 PKMTKTGSREVTADNCDRISQLSDDILIHILSFLHYKDDIGPTTSLLSKRWRYLWRDL 581
           P   + G RE   D+C+RIS+L D +L+HILSFL   D I   TSLL +RWRYLWR +
Sbjct: 17  PPKFRVGERE---DDCERISELPDHLLLHILSFLCIDDAI--PTSLLCRRWRYLWRSI 69


>gb|OAO91990.1| hypothetical protein AXX17_AT5G56030 [Arabidopsis thaliana]
          Length = 1076

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 31/62 (50%), Positives = 42/62 (67%)
 Frame = +3

Query: 390 DWFCPNPKMTKTGSREVTADNCDRISQLSDDILIHILSFLHYKDDIGPTTSLLSKRWRYL 569
           DW    P++   GS EV+    DRIS L DD+L+ ILSF+H  D I  +TSLLSKRW+++
Sbjct: 448 DWAMKAPRL---GSEEVSYS--DRISYLPDDLLLRILSFIHTSDAI--STSLLSKRWKFV 500

Query: 570 WR 575
           W+
Sbjct: 501 WK 502


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