BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00032214
         (753 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263990.1| pentatricopeptide repeat-containing protein ...   417   e-142
gb|ONK69086.1| uncharacterized protein A4U43_C05F19140 [Asparagu...   417   e-141
gb|ONK69084.1| uncharacterized protein A4U43_C05F19120 [Asparagu...   259   4e-83
ref|XP_020263991.1| pentatricopeptide repeat-containing protein ...   259   3e-81
ref|XP_016747142.1| PREDICTED: pentatricopeptide repeat-containi...   248   8e-76
dbj|GAV61585.1| LOW QUALITY PROTEIN: PPR domain-containing prote...   245   2e-74
ref|XP_012478850.1| PREDICTED: pentatricopeptide repeat-containi...   247   2e-74
ref|XP_016693528.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   240   3e-74
ref|XP_017628790.1| PREDICTED: pentatricopeptide repeat-containi...   245   9e-74
ref|XP_012447691.1| PREDICTED: pentatricopeptide repeat-containi...   247   1e-73
gb|OMO78062.1| hypothetical protein COLO4_24864 [Corchorus olito...   242   1e-73
ref|XP_016689141.1| PREDICTED: pentatricopeptide repeat-containi...   247   2e-73
ref|XP_016745273.1| PREDICTED: pentatricopeptide repeat-containi...   244   2e-73
gb|PPR81877.1| hypothetical protein GOBAR_AA38833 [Gossypium bar...   246   3e-73
ref|XP_016750661.1| PREDICTED: pentatricopeptide repeat-containi...   246   4e-73
ref|XP_011623349.1| pentatricopeptide repeat-containing protein ...   241   6e-73
gb|PPR96716.1| hypothetical protein GOBAR_AA23966 [Gossypium bar...   245   8e-73
ref|XP_017647463.1| PREDICTED: pentatricopeptide repeat-containi...   245   8e-73
gb|PPD87432.1| hypothetical protein GOBAR_DD15599 [Gossypium bar...   245   9e-73
ref|XP_006485864.2| PREDICTED: pentatricopeptide repeat-containi...   239   9e-73

>ref|XP_020263990.1| pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Asparagus officinalis]
          Length = 530

 Score =  417 bits (1072), Expect = e-142
 Identities = 200/250 (80%), Positives = 224/250 (89%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R++SLVDA+KLFD KPRSEMGSWNSLI+GY++NG+ REA+ LFYRLRDH +LCPNSI+ +
Sbjct: 102 RLNSLVDAQKLFDVKPRSEMGSWNSLILGYAKNGYPREALNLFYRLRDHRNLCPNSISFL 161

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
           GALNACAALG VKEGK IHDY  N+G KVD II TSLIDMYSKCG V+TAR++FEGM  K
Sbjct: 162 GALNACAALGAVKEGKVIHDYFVNSGFKVDRIIGTSLIDMYSKCGCVDTARDIFEGMKDK 221

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLVAWSAMISGHG NG+VKEAI+LFDRMR+   LKPDNVIFTS+LSACSHSGML+EGW Y
Sbjct: 222 DLVAWSAMISGHGVNGEVKEAIKLFDRMRKNYHLKPDNVIFTSILSACSHSGMLEEGWFY 281

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYN 31
           FNEMK VYGLEPK EQYAC+VDLLGRAGKL E+L FIKEMPIEPDVSVWGA LGAC I+N
Sbjct: 282 FNEMKRVYGLEPKQEQYACIVDLLGRAGKLDESLDFIKEMPIEPDVSVWGALLGACRIHN 341

Query: 30  NMELGIYAAE 1
           NM+LGIYAAE
Sbjct: 342 NMKLGIYAAE 351



 Score =  100 bits (250), Expect = 1e-20
 Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R   L  A  +F   P   + +WN++I  Y++ G+++E  GLF ++        N ITL 
Sbjct: 4   RFGDLDPAGSIFWSMPERNVVAWNTMISVYAQTGNIKETWGLFNQMLVE-GFEANEITLS 62

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
              N+   L    +G  IH  +   G+  D II  SLIDMY++  S+  A++LF+     
Sbjct: 63  CMANSSNEL---LQGMMIHGLVIKIGLIEDEIIGASLIDMYARLNSLVDAQKLFDVKPRS 119

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWA- 214
           ++ +W+++I G+  NG  +EA+ LF R+R    L P+++ F   L+AC+  G +KEG   
Sbjct: 120 EMGSWNSLILGYAKNGYPREALNLFYRLRDHRNLCPNSISFLGALNACAALGAVKEGKVI 179

Query: 213 --YF------------NEMKGVY--------------GLEPKN-EQYACMVDLLGRAGKL 121
             YF              +  +Y              G++ K+   ++ M+   G  G++
Sbjct: 180 HDYFVNSGFKVDRIIGTSLIDMYSKCGCVDTARDIFEGMKDKDLVAWSAMISGHGVNGEV 239

Query: 120 SEALKFI----KEMPIEPDVSVWGAFLGACSIYNNMELG 16
            EA+K      K   ++PD  ++ + L ACS    +E G
Sbjct: 240 KEAIKLFDRMRKNYHLKPDNVIFTSILSACSHSGMLEEG 278


>gb|ONK69086.1| uncharacterized protein A4U43_C05F19140 [Asparagus officinalis]
          Length = 604

 Score =  417 bits (1072), Expect = e-141
 Identities = 200/250 (80%), Positives = 224/250 (89%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R++SLVDA+KLFD KPRSEMGSWNSLI+GY++NG+ REA+ LFYRLRDH +LCPNSI+ +
Sbjct: 176 RLNSLVDAQKLFDVKPRSEMGSWNSLILGYAKNGYPREALNLFYRLRDHRNLCPNSISFL 235

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
           GALNACAALG VKEGK IHDY  N+G KVD II TSLIDMYSKCG V+TAR++FEGM  K
Sbjct: 236 GALNACAALGAVKEGKVIHDYFVNSGFKVDRIIGTSLIDMYSKCGCVDTARDIFEGMKDK 295

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLVAWSAMISGHG NG+VKEAI+LFDRMR+   LKPDNVIFTS+LSACSHSGML+EGW Y
Sbjct: 296 DLVAWSAMISGHGVNGEVKEAIKLFDRMRKNYHLKPDNVIFTSILSACSHSGMLEEGWFY 355

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYN 31
           FNEMK VYGLEPK EQYAC+VDLLGRAGKL E+L FIKEMPIEPDVSVWGA LGAC I+N
Sbjct: 356 FNEMKRVYGLEPKQEQYACIVDLLGRAGKLDESLDFIKEMPIEPDVSVWGALLGACRIHN 415

Query: 30  NMELGIYAAE 1
           NM+LGIYAAE
Sbjct: 416 NMKLGIYAAE 425



 Score =  100 bits (250), Expect = 1e-20
 Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 34/279 (12%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R   L  A  +F   P   + +WN++I  Y++ G+++E  GLF ++        N ITL 
Sbjct: 78  RFGDLDPAGSIFWSMPERNVVAWNTMISVYAQTGNIKETWGLFNQMLVE-GFEANEITLS 136

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
              N+   L    +G  IH  +   G+  D II  SLIDMY++  S+  A++LF+     
Sbjct: 137 CMANSSNEL---LQGMMIHGLVIKIGLIEDEIIGASLIDMYARLNSLVDAQKLFDVKPRS 193

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWA- 214
           ++ +W+++I G+  NG  +EA+ LF R+R    L P+++ F   L+AC+  G +KEG   
Sbjct: 194 EMGSWNSLILGYAKNGYPREALNLFYRLRDHRNLCPNSISFLGALNACAALGAVKEGKVI 253

Query: 213 --YF------------NEMKGVY--------------GLEPKN-EQYACMVDLLGRAGKL 121
             YF              +  +Y              G++ K+   ++ M+   G  G++
Sbjct: 254 HDYFVNSGFKVDRIIGTSLIDMYSKCGCVDTARDIFEGMKDKDLVAWSAMISGHGVNGEV 313

Query: 120 SEALKFI----KEMPIEPDVSVWGAFLGACSIYNNMELG 16
            EA+K      K   ++PD  ++ + L ACS    +E G
Sbjct: 314 KEAIKLFDRMRKNYHLKPDNVIFTSILSACSHSGMLEEG 352



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
 Frame = -1

Query: 603 TDLCPNSITLVGALNACAALGVVKE-----GKAIHDYIANNG--IKVDLIINTSLIDMYS 445
           T +CP  ITL   L AC + G +       G+AIH Y+   G  ++ D+ +N++L+ MY 
Sbjct: 21  TRICP-LITL--RLLACQSRGSMNWLYRNIGRAIHGYVVKVGRDVRDDVSVNSALVFMYP 77

Query: 444 KCGSVETARELFEGMMAKDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFT 265
           + G ++ A  +F  M  +++VAW+ MIS +   G +KE   LF++M  V   + + +  +
Sbjct: 78  RFGDLDPAGSIFWSMPERNVVAWNTMISVYAQTGNIKETWGLFNQM-LVEGFEANEITLS 136

Query: 264 SLLSACSH--SGMLKEGWAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEM 91
            + ++ +    GM+  G           GL       A ++D+  R   L +A K     
Sbjct: 137 CMANSSNELLQGMMIHGLVI------KIGLIEDEIIGASLIDMYARLNSLVDAQKLFDVK 190

Query: 90  PIEPDVSVWGAFL 52
           P   ++  W + +
Sbjct: 191 P-RSEMGSWNSLI 202


>gb|ONK69084.1| uncharacterized protein A4U43_C05F19120 [Asparagus officinalis]
          Length = 301

 Score =  259 bits (663), Expect = 4e-83
 Identities = 128/177 (72%), Positives = 152/177 (85%)
 Frame = -1

Query: 753 VRMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITL 574
           +R++SLVDA+KLFDE PRSEMGSWNSLI+GYSRNGH REA+ LFYRLRD  +L  NSITL
Sbjct: 115 IRLNSLVDAQKLFDEMPRSEMGSWNSLILGYSRNGHPREALNLFYRLRDSKNLLANSITL 174

Query: 573 VGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMA 394
            GAL+ACA+LGV++EGKAIH+YI N G+K+DLIINTSL++MY KCGS+ETARE+FE M  
Sbjct: 175 AGALSACASLGVIEEGKAIHEYIMNIGMKMDLIINTSLVNMYCKCGSLETAREVFESMRD 234

Query: 393 KDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKE 223
           KDLVAW  MISG+  NGQVKEA+ELFDRM+ VN LK +NV FTSLLSA SH  +L+E
Sbjct: 235 KDLVAWRVMISGYVFNGQVKEAMELFDRMKTVNNLKLNNVTFTSLLSALSHVALLEE 291



 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 60/229 (26%), Positives = 118/229 (51%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R   L  A  +F   P   + SWN++I  +++ G+++EA  LF ++        + +T  
Sbjct: 18  RFGDLDSAELIFRSMPDRNVVSWNAMINAHAQAGNIKEAWDLFSQMLTEGSEA-SDVTFT 76

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             ++A   L   K+G+ +H ++   G   + II  +LI+MY +  S+  A++LF+ M   
Sbjct: 77  CMISASYEL---KQGRMMHGFVIKAGSVNNEIIGATLINMYIRLNSLVDAQKLFDEMPRS 133

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           ++ +W+++I G+  NG  +EA+ LF R+R    L  +++     LSAC+  G+++EG A 
Sbjct: 134 EMGSWNSLILGYSRNGHPREALNLFYRLRDSKNLLANSITLAGALSACASLGVIEEGKAI 193

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVW 64
              +  + G++        +V++  + G L  A +  + M  + D+  W
Sbjct: 194 HEYIMNI-GMKMDLIINTSLVNMYCKCGSLETAREVFESMR-DKDLVAW 240


>ref|XP_020263991.1| pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Asparagus officinalis]
          Length = 443

 Score =  259 bits (663), Expect = 3e-81
 Identities = 128/177 (72%), Positives = 152/177 (85%)
 Frame = -1

Query: 753 VRMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITL 574
           +R++SLVDA+KLFDE PRSEMGSWNSLI+GYSRNGH REA+ LFYRLRD  +L  NSITL
Sbjct: 257 IRLNSLVDAQKLFDEMPRSEMGSWNSLILGYSRNGHPREALNLFYRLRDSKNLLANSITL 316

Query: 573 VGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMA 394
            GAL+ACA+LGV++EGKAIH+YI N G+K+DLIINTSL++MY KCGS+ETARE+FE M  
Sbjct: 317 AGALSACASLGVIEEGKAIHEYIMNIGMKMDLIINTSLVNMYCKCGSLETAREVFESMRD 376

Query: 393 KDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKE 223
           KDLVAW  MISG+  NGQVKEA+ELFDRM+ VN LK +NV FTSLLSA SH  +L+E
Sbjct: 377 KDLVAWRVMISGYVFNGQVKEAMELFDRMKTVNNLKLNNVTFTSLLSALSHVALLEE 433



 Score = 95.9 bits (237), Expect = 5e-19
 Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 10/234 (4%)
 Frame = -1

Query: 723 KLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAAL 544
           +L +E P  ++  +N+ I G S+      A+ +F+ +R    L  N  TL G + AC  L
Sbjct: 66  RLLEEFPNPDLPIYNAAITGLSKQEEYESALQVFHGMRVE-GLDSNRTTLSGVIMACGRL 124

Query: 543 GVVKEGKAIHDYIANNGIKV--DLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
              K G+AIH ++   G +V  D+ +N++L+ MY + G +++A  +F  M  +++V+W+A
Sbjct: 125 VDEKFGRAIHGHVVKAGEEVRGDVSVNSALVFMYPRFGDLDSAELIFRSMPDRNVVSWNA 184

Query: 369 MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSA--------CSHSGMLKEGWA 214
           MI+ H   G +KEA +LF +M      +  +V FT ++SA          H  ++K G +
Sbjct: 185 MINAHAQAGNIKEAWDLFSQMLTEGS-EASDVTFTCMISASYELKQGRMMHGFVIKAG-S 242

Query: 213 YFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
             NE+ G           A ++++  R   L +A K   EMP   ++  W + +
Sbjct: 243 VNNEIIG-----------ATLINMYIRLNSLVDAQKLFDEMP-RSEMGSWNSLI 284



 Score = 95.9 bits (237), Expect = 5e-19
 Identities = 60/229 (26%), Positives = 118/229 (51%)
 Frame = -1

Query: 750 RMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           R   L  A  +F   P   + SWN++I  +++ G+++EA  LF ++        + +T  
Sbjct: 160 RFGDLDSAELIFRSMPDRNVVSWNAMINAHAQAGNIKEAWDLFSQMLTEGSEA-SDVTFT 218

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             ++A   L   K+G+ +H ++   G   + II  +LI+MY +  S+  A++LF+ M   
Sbjct: 219 CMISASYEL---KQGRMMHGFVIKAGSVNNEIIGATLINMYIRLNSLVDAQKLFDEMPRS 275

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           ++ +W+++I G+  NG  +EA+ LF R+R    L  +++     LSAC+  G+++EG A 
Sbjct: 276 EMGSWNSLILGYSRNGHPREALNLFYRLRDSKNLLANSITLAGALSACASLGVIEEGKAI 335

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVW 64
              +  + G++        +V++  + G L  A +  + M  + D+  W
Sbjct: 336 HEYIMNI-GMKMDLIINTSLVNMYCKCGSLETAREVFESMR-DKDLVAW 382



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 11/205 (5%)
 Frame = -1

Query: 603 TDLCPNSITLVGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVET 424
           ++L P+  TL   LNACA L  +    +IH +     +  D  + ++LID Y KCG ++ 
Sbjct: 4   SNLIPDKFTLPSILNACAYLSSLSLVLSIHAFAIKTQLSFDPFVVSALIDAYCKCGHIDC 63

Query: 423 ARELFEGMMAKDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACS 244
              L E     DL  ++A I+G     + + A+++F  M RV  L  +    + ++ AC 
Sbjct: 64  VLRLLEEFPNPDLPIYNAAITGLSKQEEYESALQVFHGM-RVEGLDSNRTTLSGVIMACG 122

Query: 243 -----------HSGMLKEGWAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIK 97
                      H  ++K G     E++G   +       + +V +  R G L  A    +
Sbjct: 123 RLVDEKFGRAIHGHVVKAG----EEVRGDVSVN------SALVFMYPRFGDLDSAELIFR 172

Query: 96  EMPIEPDVSVWGAFLGACSIYNNME 22
            MP + +V  W A + A +   N++
Sbjct: 173 SMP-DRNVVSWNAMINAHAQAGNIK 196


>ref|XP_016747142.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
            chloroplastic-like, partial [Gossypium hirsutum]
          Length = 544

 Score =  248 bits (634), Expect = 8e-76
 Identities = 122/238 (51%), Positives = 165/238 (69%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            ARKLFD+ P   + SWNS+I G  + G  +EA+ +F+ ++    L P+S+TLV  LNAC+
Sbjct: 295  ARKLFDKMPVKNVVSWNSMISGLVQQGQFKEALHVFHDMQ-RIGLRPDSVTLVAVLNACS 353

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ GK +H YI  N IK D I+  +L+DMY+KCG+ E A  +F+GM  KD+ +++A
Sbjct: 354  NLGKLELGKWVHAYIDKNQIKADGIVGNALVDMYAKCGNAEQAFGVFQGMECKDVFSYTA 413

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI G   NG+ + A+++F  M  V  +KPD V F  +LSACSH+GM++EGW +F +M  V
Sbjct: 414  MIVGFAMNGEAERALDIFAEMPMVG-IKPDEVTFVGVLSACSHAGMVEEGWRHFEDMSRV 472

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
            Y LEP+ E Y CMVDLLGRAG +SEA  FI  MPIEPD  VWGA LGACSI+  +ELG
Sbjct: 473  YNLEPQTEHYGCMVDLLGRAGLISEAEVFIANMPIEPDAFVWGALLGACSIHGKVELG 530



 Score =  133 bits (335), Expect = 3e-32
 Identities = 91/271 (33%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
 Frame = -1

Query: 726  RKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAA 547
            +KLFD  P  ++ SW +LI  + + G  +EA+  ++ +    +L P+  TLV  L+AC+ 
Sbjct: 194  KKLFDGSPERDLVSWTTLIQAFVKMGFAKEAIQAYFDMC-RANLRPDKRTLVVILSACSR 252

Query: 546  LGVVKEGKAIHDYIAN-NGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            LG +  G  IH+ I + + I  D+ +  +L+DMY KCG  ++AR+LF+ M  K++V+W++
Sbjct: 253  LGDLSLGTRIHENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVSWNS 312

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-WAYF----N 205
            MISG    GQ KEA+ +F  M+R+  L+PD+V   ++L+ACS+ G L+ G W +     N
Sbjct: 313  MISGLVQQGQFKEALHVFHDMQRIG-LRPDSVTLVAVLNACSNLGKLELGKWVHAYIDKN 371

Query: 204  EMK-----------------------GVY-GLEPKNE-QYACMVDLLGRAGKLSEALKFI 100
            ++K                       GV+ G+E K+   Y  M+      G+   AL   
Sbjct: 372  QIKADGIVGNALVDMYAKCGNAEQAFGVFQGMECKDVFSYTAMIVGFAMNGEAERALDIF 431

Query: 99   KEMP---IEPDVSVWGAFLGACSIYNNMELG 16
             EMP   I+PD   +   L ACS    +E G
Sbjct: 432  AEMPMVGIKPDEVTFVGVLSACSHAGMVEEG 462



 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
 Frame = -1

Query: 744 DSLVDARKLFDE--KPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           +S+  AR+L +    P  ++  +NSLI   + +    +A+ L+  +     + P++ T+ 
Sbjct: 88  ESVTYARELVNHLNPPYLQLHFYNSLIQALTNSS---QAIALYGEMITKC-IYPDTYTIP 143

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             L +CA    ++ G+ IH +    G+  ++ +  +L+ +Y+ CG   + ++LF+G   +
Sbjct: 144 YVLKSCAQSHALEGGQQIHAHSIKFGLSSNVYVLNTLMRLYAVCGFTHSVKKLFDGSPER 203

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLV+W+ +I      G  KEAI+ +  M R N L+PD      +LSACS  G L  G   
Sbjct: 204 DLVSWTTLIQAFVKMGFAKEAIQAYFDMCRAN-LRPDKRTLVVILSACSRLGDLSLGTRI 262

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
              +  ++ +         +VD+  + G    A K   +MP++  VS W + +
Sbjct: 263 HENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVS-WNSMI 314


>dbj|GAV61585.1| LOW QUALITY PROTEIN: PPR domain-containing protein/PPR_2
           domain-containing protein/DYW_deaminase
           domain-containing protein, partial [Cephalotus
           follicularis]
          Length = 553

 Score =  245 bits (626), Expect = 2e-74
 Identities = 121/237 (51%), Positives = 162/237 (68%)
 Frame = -1

Query: 729 ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
           A KLF E    ++  W+S+I G+++NG   EAM LF RL     + PNS+TL G L AC+
Sbjct: 143 AAKLFGETDNKDVVMWSSMIAGFAKNGRAWEAMSLF-RLMLRELITPNSVTLAGILLACS 201

Query: 549 ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
           ++G +K GK++H Y+  N I +D+I  TS +DMY+KCG +ETAR +F  M  K++V+WSA
Sbjct: 202 SVGFLKLGKSVHGYMVRNKIDLDVINYTSFLDMYAKCGCLETARRVFNEMPEKNVVSWSA 261

Query: 369 MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
           MI+  G +G   EA   FD+MR  N+L P++V F S+LSACSHSG + EGW YF  M   
Sbjct: 262 MINAFGIHGLFSEAFAFFDKMRSENQL-PNSVTFVSVLSACSHSGRIDEGWRYFYSMNRD 320

Query: 189 YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
           YG+ P  E YAC++DLLGRAGK+ EAL FI+ MPI+P  S WGA LGAC I+  +EL
Sbjct: 321 YGIVPVEEHYACIIDLLGRAGKIDEALSFIRNMPIKPGASAWGALLGACRIHKRVEL 377



 Score =  111 bits (277), Expect = 3e-24
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 38/278 (13%)
 Frame = -1

Query: 753 VRMDSLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITL 574
           ++  SL  A   FD+     + SWN++I GYS+N      + L+ R++       ++  L
Sbjct: 2   IQFGSLQFAYNSFDQIKLKNLYSWNTIISGYSKNKCHHNVLSLYKRMQTEGHGV-DTFNL 60

Query: 573 VGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMA 394
           V  + A   L V++ GK +H      G+  D  +  +L++MYS+ GS++ AR++FEG+  
Sbjct: 61  VFVIKASVGLSVLRNGKLVHCLAVKCGLDYDPYVAPALVEMYSELGSLDCARKVFEGVSE 120

Query: 393 --------------------------------KDLVAWSAMISGHGANGQVKEAIELFDR 310
                                           KD+V WS+MI+G   NG+  EA+ LF  
Sbjct: 121 RSSVLWGVMIKDMYMNCGLLDFAAKLFGETDNKDVVMWSSMIAGFAKNGRAWEAMSLFRL 180

Query: 309 MRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGVYGLEPKNE------QYACMV 148
           M R   + P++V    +L ACS  G LK G       K V+G   +N+       Y   +
Sbjct: 181 MLR-ELITPNSVTLAGILLACSSVGFLKLG-------KSVHGYMVRNKIDLDVINYTSFL 232

Query: 147 DLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIY 34
           D+  + G L  A +   EMP E +V  W A + A  I+
Sbjct: 233 DMYAKCGCLETARRVFNEMP-EKNVVSWSAMINAFGIH 269



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  AR++F+E P   + SW+++I  +  +G   EA   F ++R    L PNS+T V  L+
Sbjct: 241 LETARRVFNEMPEKNVVSWSAMINAFGIHGLFSEAFAFFDKMRSENQL-PNSVTFVSVLS 299

Query: 558 ACAALGVVKEG-KAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK-DL 385
           AC+  G + EG +  +    + GI         +ID+  + G ++ A      M  K   
Sbjct: 300 ACSHSGRIDEGWRYFYSMNRDYGIVPVEEHYACIIDLLGRAGKIDEALSFIRNMPIKPGA 359

Query: 384 VAWSAMISGHGANGQVKEAIEL 319
            AW A++     + +V+ A EL
Sbjct: 360 SAWGALLGACRIHKRVELAEEL 381


>ref|XP_012478850.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Gossypium raimondii]
 gb|KJB09401.1| hypothetical protein B456_001G139300 [Gossypium raimondii]
          Length = 631

 Score =  247 bits (630), Expect = 2e-74
 Identities = 122/238 (51%), Positives = 163/238 (68%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            ARKLFD+ P   + SWNS+I G  + G  +EA+ +F+ ++    L P+S+TLV  LNAC+
Sbjct: 295  ARKLFDKMPVKNVVSWNSMISGLVQQGQFKEALHVFHDMQ-RIGLRPDSVTLVAVLNACS 353

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ GK +H YI  N IK D  +  +L+DMY+KCGS E A  +F+GM  KD+ +++A
Sbjct: 354  NLGKLELGKWVHAYIDKNQIKADGFVGNALVDMYAKCGSAEQAFGVFQGMECKDVFSYTA 413

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI G   NG+ + A+++F  M  V   KPD V F  +LSACSH+GM++EGW +F +M  V
Sbjct: 414  MIVGFAMNGEAERALDIFAEMPMVGT-KPDEVTFVGVLSACSHAGMVEEGWKHFEDMSRV 472

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
            Y LEP+ E Y CMVDLLGRAG +SEA  FI  MPIEPD  VWGA LGACSI+  +ELG
Sbjct: 473  YNLEPQTEHYGCMVDLLGRAGLISEAEVFIANMPIEPDAFVWGALLGACSIHGKVELG 530



 Score =  132 bits (332), Expect = 1e-31
 Identities = 90/271 (33%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
 Frame = -1

Query: 726  RKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAA 547
            +KLFD  P  ++ SW +LI  + + G  +EA+  ++ +    +L P+  TLV  L+AC+ 
Sbjct: 194  KKLFDGSPERDLVSWTTLIQAFVKMGFAKEAIQAYFDMC-RANLRPDKRTLVVILSACSR 252

Query: 546  LGVVKEGKAIHDYIAN-NGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            LG +  G  IH+ I + + I  D+ +  +L+DMY KCG  ++AR+LF+ M  K++V+W++
Sbjct: 253  LGDLSLGTRIHENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVSWNS 312

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-WAYF----N 205
            MISG    GQ KEA+ +F  M+R+  L+PD+V   ++L+ACS+ G L+ G W +     N
Sbjct: 313  MISGLVQQGQFKEALHVFHDMQRIG-LRPDSVTLVAVLNACSNLGKLELGKWVHAYIDKN 371

Query: 204  EMK-----------------------GVY-GLEPKNE-QYACMVDLLGRAGKLSEALKFI 100
            ++K                       GV+ G+E K+   Y  M+      G+   AL   
Sbjct: 372  QIKADGFVGNALVDMYAKCGSAEQAFGVFQGMECKDVFSYTAMIVGFAMNGEAERALDIF 431

Query: 99   KEMPI---EPDVSVWGAFLGACSIYNNMELG 16
             EMP+   +PD   +   L ACS    +E G
Sbjct: 432  AEMPMVGTKPDEVTFVGVLSACSHAGMVEEG 462



 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
 Frame = -1

Query: 744 DSLVDARKLFD--EKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           +S+  AR+L +  + P  ++  +NSLI   + +    +A+ L+  +     + P++ T+ 
Sbjct: 88  ESVTYARELVNHLKPPYLQLHFYNSLIQALTNSS---QAIALYGEMITKC-IYPDTYTIP 143

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             L +CA    ++EG+ IH +    G+  ++ +  +L+ +Y+ CG   + ++LF+G   +
Sbjct: 144 YVLKSCAQSHALEEGQQIHAHSIKFGLSSNVYVLNTLMRLYAVCGFTHSVKKLFDGSPER 203

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLV+W+ +I      G  KEAI+ +  M R N L+PD      +LSACS  G L  G   
Sbjct: 204 DLVSWTTLIQAFVKMGFAKEAIQAYFDMCRAN-LRPDKRTLVVILSACSRLGDLSLGTRI 262

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
              +  ++ +         +VD+  + G    A K   +MP++  VS W + +
Sbjct: 263 HENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVS-WNSMI 314


>ref|XP_016693528.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g08070, chloroplastic-like, partial
           [Gossypium hirsutum]
          Length = 401

 Score =  240 bits (613), Expect = 3e-74
 Identities = 118/238 (49%), Positives = 159/238 (66%)
 Frame = -1

Query: 729 ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
           ARKLFD+ P   + SWNS+I G  + G  +EA+ +F  ++    L P+ +TLV  LNAC+
Sbjct: 114 ARKLFDKMPVKNVASWNSMISGLVQQGQFKEALHVFXDMQ-RISLRPDGVTLVAVLNACS 172

Query: 549 ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            LG ++ GK +H YI  N IK D  +  +L+DMY+KCGS E A  +F+GM  KD+ +++A
Sbjct: 173 NLGKLELGKWVHAYIDKNQIKADGFVGNALVDMYAKCGSAEQAFGVFQGMECKDVFSYTA 232

Query: 369 MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
           MI G   NG+ + A+++F  M  V   KPD V F  +LSACSH+GM++EGW +F +M   
Sbjct: 233 MIMGFAMNGEAERALDIFAEMPMVGS-KPDEVTFVDVLSACSHAGMVEEGWRHFEDMSKX 291

Query: 189 YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
           + LEP+ E Y CMVDLLGRAG +SEA  FI  MPIEPD  VWGA LGACSI+  +E G
Sbjct: 292 FNLEPQTEHYGCMVDLLGRAGLISEAEVFIANMPIEPDAFVWGALLGACSIHGKVEPG 349



 Score =  108 bits (271), Expect = 6e-24
 Identities = 78/229 (34%), Positives = 121/229 (52%), Gaps = 34/229 (14%)
 Frame = -1

Query: 600 DLCPNSITLVGALNACAALGVVKEGKAIHDYIAN-NGIKVDLIINTSLIDMYSKCGSVET 424
           +L P+ +TLV  L+AC+ LG +  G  IH+ I   + I  D+ I  +L+DMY KCG  ++
Sbjct: 54  NLRPDKMTLVVILSACSRLGDLSLGTRIHENILXIHDIYSDVFIGNALVDMYMKCGDADS 113

Query: 423 ARELFEGMMAKDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACS 244
           AR+LF+ M  K++ +W++MISG    GQ KEA+ +F  M+R++ L+PD V   ++L+ACS
Sbjct: 114 ARKLFDKMPVKNVASWNSMISGLVQQGQFKEALHVFXDMQRIS-LRPDGVTLVAVLNACS 172

Query: 243 HSGMLKEG-WAYF----NEMK-----------------------GVY-GLEPKNE-QYAC 154
           + G L+ G W +     N++K                       GV+ G+E K+   Y  
Sbjct: 173 NLGKLELGKWVHAYIDKNQIKADGFVGNALVDMYAKCGSAEQAFGVFQGMECKDVFSYTA 232

Query: 153 MVDLLGRAGKLSEALKFIKEMPI---EPDVSVWGAFLGACSIYNNMELG 16
           M+      G+   AL    EMP+   +PD   +   L ACS    +E G
Sbjct: 233 MIMGFAMNGEAERALDIFAEMPMVGSKPDEVTFVDVLSACSHAGMVEEG 281


>ref|XP_017628790.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
            chloroplastic-like [Gossypium arboreum]
          Length = 631

 Score =  245 bits (626), Expect = 9e-74
 Identities = 120/238 (50%), Positives = 163/238 (68%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            AR+LFD+ P   + SWNS+I G  + G  +EA+ +F+ ++    L P+ +TLV  LNAC+
Sbjct: 295  ARQLFDKMPVKNVVSWNSMISGLVQQGQFKEALHVFHDMQ-RIGLRPDCVTLVAVLNACS 353

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ GK +H YI  N IK D  +  +L+DMY+KCGSVE A  +F+GM  KD+ +++A
Sbjct: 354  NLGKLELGKWVHAYIDKNQIKADGFVGNALVDMYAKCGSVEQAFGVFQGMQCKDVFSYTA 413

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI G   NG+ + A+++F  M  V  +KPD V F  +LSACSH+GM++EGW +F +M  V
Sbjct: 414  MIVGFAMNGEAERALDIFAEMPMVG-IKPDEVTFVGVLSACSHAGMVEEGWRHFEDMSRV 472

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
            Y LEP+ E Y CMVDLLGRAG +SE   FI  MPIEPD  VWGA LGACSI+  +ELG
Sbjct: 473  YNLEPQTEHYGCMVDLLGRAGLISEVEVFIANMPIEPDAFVWGALLGACSIHGKVELG 530



 Score =  130 bits (327), Expect = 7e-31
 Identities = 89/271 (32%), Positives = 143/271 (52%), Gaps = 34/271 (12%)
 Frame = -1

Query: 726  RKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAA 547
            +KLFD  P  ++ SW +LI  + + G  +EA+  +  +    +L P+ +TLV  L+AC+ 
Sbjct: 194  KKLFDGSPERDLVSWTTLIQAFVKTGFAKEAIQAYLDMC-RANLRPDKMTLVVVLSACSR 252

Query: 546  LGVVKEGKAIHDYIAN-NGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            +G +  G  IH+ I   + I  D+ +  +L+DMY KCG  ++AR+LF+ M  K++V+W++
Sbjct: 253  IGDLSLGTRIHENICYIHDIYSDVFVGNALVDMYMKCGDTDSARQLFDKMPVKNVVSWNS 312

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-WAYF----N 205
            MISG    GQ KEA+ +F  M+R+  L+PD V   ++L+ACS+ G L+ G W +     N
Sbjct: 313  MISGLVQQGQFKEALHVFHDMQRIG-LRPDCVTLVAVLNACSNLGKLELGKWVHAYIDKN 371

Query: 204  EMK-----------------------GVY-GLEPKNE-QYACMVDLLGRAGKLSEALKFI 100
            ++K                       GV+ G++ K+   Y  M+      G+   AL   
Sbjct: 372  QIKADGFVGNALVDMYAKCGSVEQAFGVFQGMQCKDVFSYTAMIVGFAMNGEAERALDIF 431

Query: 99   KEMP---IEPDVSVWGAFLGACSIYNNMELG 16
             EMP   I+PD   +   L ACS    +E G
Sbjct: 432  AEMPMVGIKPDEVTFVGVLSACSHAGMVEEG 462



 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
 Frame = -1

Query: 744 DSLVDARKLFDE--KPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           +S+  AR+L +    P  ++  +NSLI   + +    +A+ L+  +     + P++ T+ 
Sbjct: 88  ESVTYARELVNHLNPPYLQLHFYNSLIQTLTNSS---QAIALYSEMITKC-IYPDTYTIP 143

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             L +CA    ++EG+ IH +    G+  ++ +  +L+ +Y+ CG     ++LF+G   +
Sbjct: 144 YVLKSCAQSHALEEGQQIHAHSIKFGLSSNVYVLNTLMRLYAVCGFTHYVKKLFDGSPER 203

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLV+W+ +I      G  KEAI+ +  M R N L+PD +    +LSACS  G L  G   
Sbjct: 204 DLVSWTTLIQAFVKTGFAKEAIQAYLDMCRAN-LRPDKMTLVVVLSACSRIGDLSLGTRI 262

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
              +  ++ +         +VD+  + G    A +   +MP++  VS W + +
Sbjct: 263 HENICYIHDIYSDVFVGNALVDMYMKCGDTDSARQLFDKMPVKNVVS-WNSMI 314


>ref|XP_012447691.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Gossypium raimondii]
 gb|KJB55760.1| hypothetical protein B456_009G092600 [Gossypium raimondii]
          Length = 733

 Score =  247 bits (631), Expect = 1e-73
 Identities = 116/237 (48%), Positives = 171/237 (72%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+++ D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+ACA
Sbjct: 312  AKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACA 371

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG +  G+ IH Y+   GIK++  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 372  QLGAMGIGECIHAYVKEQGIKLNCHLTTSLIDMYSKCGDIKKALDVFYSVDRRDVFVWSA 431

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF RM+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 432  MIAGLAMHGQGRDAIDLFSRMQE-TMIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 490

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++FI++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 491  YGIRPGIQHYSCMVDILGRAGLLEEAVEFIEKMPILPSDSVWGALLGACQIHGNVEL 547



 Score =  127 bits (319), Expect = 1e-29
 Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G   +A  LF  + +   + PN +T+VG L+
Sbjct: 177 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEKAFQLFQEMEEE-GVKPNDVTMVGVLS 235

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++ +++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 236 ACAKKLDLELGRWVCSYIERKGIRVDLTLSNAMLDMYTKCGSLEDAKRLFDMMEEKDIVT 295

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 296 WTTMLDGYAKLGEYETAKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 355

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSAC+  G +  G    AY  E     G++        ++D+  + G +
Sbjct: 356 AKPDGITLVSALSACAQLGAMGIGECIHAYVKEQ----GIKLNCHLTTSLIDMYSKCGDI 411

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 412 KKALDVFYSVD-RRDVFVWSAMIAGLAMH 439



 Score =  105 bits (262), Expect = 4e-22
 Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + SWN+LI   + +    + + +F R+   +   PN  T    +
Sbjct: 74  SLDYARKVFDQIPKPNLHSWNTLIRVCASSSEPLQGILIFLRMVHESPYYPNKFTFPFVI 133

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 134 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 193

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  ++A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 194 SWNSMITGLAQRGCAEKAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLELGRWVCSY 252

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A K + +M  E D+  W   L
Sbjct: 253 IERKGIRVDLTLSN----AMLDMYTKCGSLEDA-KRLFDMMEEKDIVTWTTML 300


>gb|OMO78062.1| hypothetical protein COLO4_24864 [Corchorus olitorius]
          Length = 508

 Score =  242 bits (617), Expect = 1e-73
 Identities = 120/238 (50%), Positives = 165/238 (69%)
 Frame = -1

Query: 729 ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
           AR+LF E P   + SWNS+I G  + G  +EA+ ++  ++    L P+S+TLV  LNAC 
Sbjct: 172 ARQLFHEMPVKNVVSWNSMISGLVQQGQYKEALDVYNDMQ-RIRLKPDSVTLVAVLNACG 230

Query: 549 ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            LG ++ GK +H YI  NGIK D  I  +L+DMY+KCGS+E A  +F+GM  +D+ +++A
Sbjct: 231 NLGKLELGKWVHAYIDKNGIKADGFIGNALVDMYAKCGSIEQAFGVFQGMKFRDVFSYTA 290

Query: 369 MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
           MI G+  NG+ + A+++F  M  V  +KPD V F  +LSACSH+GM++EG  +F +M  V
Sbjct: 291 MIVGYAMNGEAQRALDIFAEMPVVG-IKPDEVTFVGVLSACSHAGMVEEGRKHFEDMSRV 349

Query: 189 YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
           Y LEP+ E Y CMVDLLGRAG +SEA +FI+ MPIEPD  VWGA LGACSI+  +ELG
Sbjct: 350 YNLEPQTEHYGCMVDLLGRAGLISEAEEFIENMPIEPDAFVWGALLGACSIHGKVELG 407



 Score =  130 bits (328), Expect = 2e-31
 Identities = 89/271 (32%), Positives = 139/271 (51%), Gaps = 34/271 (12%)
 Frame = -1

Query: 726 RKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAA 547
           +KLFDE P  ++ SW + I  + + G  +EA+G ++ +     L P+  TLV  L+AC+ 
Sbjct: 71  QKLFDESPERDVVSWTTRIQAFVKMGFAKEAIGAYFDMC-REKLRPDKRTLVVVLSACSR 129

Query: 546 LGVVKEGKAIHDYIANN-GIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
           LG +  G  IH+ I +   I  D+ +  +LIDMY KCG  ++AR+LF  M  K++V+W++
Sbjct: 130 LGDLSLGTQIHENICDVCDIYSDVFLGNALIDMYMKCGDADSARQLFHEMPVKNVVSWNS 189

Query: 369 MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-WAYF----- 208
           MISG    GQ KEA+++++ M+R+ +LKPD+V   ++L+AC + G L+ G W +      
Sbjct: 190 MISGLVQQGQYKEALDVYNDMQRI-RLKPDSVTLVAVLNACGNLGKLELGKWVHAYIDKN 248

Query: 207 ---------NEMKGVYGLEPKNEQ---------------YACMVDLLGRAGKLSEALKFI 100
                    N +  +Y      EQ               Y  M+      G+   AL   
Sbjct: 249 GIKADGFIGNALVDMYAKCGSIEQAFGVFQGMKFRDVFSYTAMIVGYAMNGEAQRALDIF 308

Query: 99  KEMP---IEPDVSVWGAFLGACSIYNNMELG 16
            EMP   I+PD   +   L ACS    +E G
Sbjct: 309 AEMPVVGIKPDEVTFVGVLSACSHAGMVEEG 339



 Score = 84.7 bits (208), Expect = 5e-15
 Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
 Frame = -1

Query: 591 PNSITLVGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETAREL 412
           P++ T+   L ACA    V+EG+ IH +    G+  ++ +  +L+ MY+ CG +   ++L
Sbjct: 14  PDTYTIPYVLKACAGFRAVEEGQQIHAHAIKFGLVCNVYVLNTLMRMYAVCGIIHYVQKL 73

Query: 411 FEGMMAKDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGM 232
           F+    +D+V+W+  I      G  KEAI  +  M R  KL+PD      +LSACS  G 
Sbjct: 74  FDESPERDVVSWTTRIQAFVKMGFAKEAIGAYFDMCR-EKLRPDKRTLVVVLSACSRLGD 132

Query: 231 LKEGWAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVW---- 64
           L  G      +  V  +         ++D+  + G    A +   EMP++  VS W    
Sbjct: 133 LSLGTQIHENICDVCDIYSDVFLGNALIDMYMKCGDADSARQLFHEMPVKNVVS-WNSMI 191

Query: 63  ------GAFLGACSIYNNME 22
                 G +  A  +YN+M+
Sbjct: 192 SGLVQQGQYKEALDVYNDMQ 211



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           S+  A  +F      ++ S+ ++I+GY+ NG  + A+ +F  +     + P+ +T VG L
Sbjct: 269 SIEQAFGVFQGMKFRDVFSYTAMIVGYAMNGEAQRALDIFAEM-PVVGIKPDEVTFVGVL 327

Query: 561 NACAALGVVKEG-KAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGM-MAKD 388
           +AC+  G+V+EG K   D      ++        ++D+  + G +  A E  E M +  D
Sbjct: 328 SACSHAGMVEEGRKHFEDMSRVYNLEPQTEHYGCMVDLLGRAGLISEAEEFIENMPIEPD 387

Query: 387 LVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTS 262
              W A++     +G+V+    +  ++  V  ++    I  S
Sbjct: 388 AFVWGALLGACSIHGKVELGESIMKKIVTVEPVRDGAYILMS 429


>ref|XP_016689141.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Gossypium hirsutum]
          Length = 735

 Score =  247 bits (630), Expect = 2e-73
 Identities = 115/237 (48%), Positives = 171/237 (72%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+++ D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+AC+
Sbjct: 314  AKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACS 373

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG +  G+ IH Y+   GIK++  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 374  QLGAMGIGECIHAYVKEQGIKLNCHLTTSLIDMYSKCGDIKKALDVFYSVDRRDVFVWSA 433

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF +M+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 434  MIAGLAMHGQGRDAIDLFSKMQE-TMIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 492

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++FI++MPI P  SVWGA LGAC IY N+EL
Sbjct: 493  YGIRPGIQHYSCMVDMLGRAGLLEEAVEFIEKMPILPSDSVWGALLGACQIYGNVEL 549



 Score =  127 bits (318), Expect = 1e-29
 Identities = 81/269 (30%), Positives = 132/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G    A  LF  + +   + PN +T+VG L+
Sbjct: 179 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEMAFQLFQEMEEE-GVKPNDVTMVGVLS 237

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++  ++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 238 ACAKKLDLELGRWVCSYIERKGIRVDLTLSNGMLDMYTKCGSLEDAKRLFDMMEEKDIVT 297

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 298 WTTMLDGYAKLGEYETAKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 357

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSACS  G +  G    AY  E     G++        ++D+  + G +
Sbjct: 358 AKPDGITLVSALSACSQLGAMGIGECIHAYVKEQ----GIKLNCHLTTSLIDMYSKCGDI 413

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 414 KKALDVFYSVD-RRDVFVWSAMIAGLAMH 441



 Score =  106 bits (264), Expect = 2e-22
 Identities = 72/233 (30%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + SWN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 76  SLDYARKVFDQIPKPNLHSWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 135

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 136 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 195

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  + A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 196 SWNSMITGLAQRGCAEMAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLELGRWVCSY 254

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A K + +M  E D+  W   L
Sbjct: 255 IERKGIRVDLTLSNG----MLDMYTKCGSLEDA-KRLFDMMEEKDIVTWTTML 302


>ref|XP_016745273.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070,
            chloroplastic-like [Gossypium hirsutum]
          Length = 631

 Score =  244 bits (624), Expect = 2e-73
 Identities = 120/238 (50%), Positives = 163/238 (68%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            ARKLFD+ P   + SWNS+I G  + G  +EA+ +F+ ++    L P+S+TLV  LNAC+
Sbjct: 295  ARKLFDKMPVKNVVSWNSMISGLVQQGQFKEALHVFHDMQ-RIGLRPDSVTLVAVLNACS 353

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ GK +H YI  N IK D I+  +L+DMY+KCG+ E A  +F+GM  KD+ +++A
Sbjct: 354  NLGKLELGKWVHAYIDKNQIKADGIVGNALVDMYAKCGNAEQAFGVFQGMECKDVFSYTA 413

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI G   NG+ + A+++F  M  V  +KPD V F  +LSACSH+GM++EGW +F +M  V
Sbjct: 414  MIVGFAMNGEAERALDIFAEMPMVG-IKPDEVTFVGVLSACSHAGMVEEGWRHFEDMSRV 472

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMELG 16
            Y LEP+ E Y CMVDL GRAG +SEA  FI  MP EPD  VWGA LGACSI+  +ELG
Sbjct: 473  YNLEPQTEHYGCMVDLFGRAGLISEAEVFIANMPSEPDALVWGALLGACSIHGKVELG 530



 Score =  133 bits (335), Expect = 5e-32
 Identities = 91/271 (33%), Positives = 145/271 (53%), Gaps = 34/271 (12%)
 Frame = -1

Query: 726  RKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACAA 547
            +KLFD  P  ++ SW +LI  + + G  +EA+  ++ +    +L P+  TLV  L+AC+ 
Sbjct: 194  KKLFDGSPERDLVSWTTLIQAFVKMGFAKEAIQAYFDMC-RANLRPDKRTLVVILSACSR 252

Query: 546  LGVVKEGKAIHDYIAN-NGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
            LG +  G  IH+ I + + I  D+ +  +L+DMY KCG  ++AR+LF+ M  K++V+W++
Sbjct: 253  LGDLSLGTRIHENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVSWNS 312

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-WAYF----N 205
            MISG    GQ KEA+ +F  M+R+  L+PD+V   ++L+ACS+ G L+ G W +     N
Sbjct: 313  MISGLVQQGQFKEALHVFHDMQRIG-LRPDSVTLVAVLNACSNLGKLELGKWVHAYIDKN 371

Query: 204  EMK-----------------------GVY-GLEPKNE-QYACMVDLLGRAGKLSEALKFI 100
            ++K                       GV+ G+E K+   Y  M+      G+   AL   
Sbjct: 372  QIKADGIVGNALVDMYAKCGNAEQAFGVFQGMECKDVFSYTAMIVGFAMNGEAERALDIF 431

Query: 99   KEMP---IEPDVSVWGAFLGACSIYNNMELG 16
             EMP   I+PD   +   L ACS    +E G
Sbjct: 432  AEMPMVGIKPDEVTFVGVLSACSHAGMVEEG 462



 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
 Frame = -1

Query: 744 DSLVDARKLFDE--KPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLV 571
           +S+  AR+L +    P  ++  +NSLI   + +    +A+ L+  +     + P++ T+ 
Sbjct: 88  ESVTYARELVNHLNPPYLQLHFYNSLIQALTNSS---QAIALYGEMITKC-IYPDTYTIP 143

Query: 570 GALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK 391
             L +CA    ++ G+ IH +    G+  ++ +  +L+ +Y+ CG   + ++LF+G   +
Sbjct: 144 YVLKSCAQSHALEGGQQIHAHSIKFGLSSNVYVLNTLMRLYAVCGFTHSVKKLFDGSPER 203

Query: 390 DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAY 211
           DLV+W+ +I      G  KEAI+ +  M R N L+PD      +LSACS  G L  G   
Sbjct: 204 DLVSWTTLIQAFVKMGFAKEAIQAYFDMCRAN-LRPDKRTLVVILSACSRLGDLSLGTRI 262

Query: 210 FNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
              +  ++ +         +VD+  + G    A K   +MP++  VS W + +
Sbjct: 263 HENICDIHDIYSDVFVGNALVDMYMKCGDADSARKLFDKMPVKNVVS-WNSMI 314


>gb|PPR81877.1| hypothetical protein GOBAR_AA38833 [Gossypium barbadense]
          Length = 735

 Score =  246 bits (628), Expect = 3e-73
 Identities = 115/237 (48%), Positives = 171/237 (72%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+++ D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+ACA
Sbjct: 314  AKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACA 373

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG +  G+ IH Y+   GIK++  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 374  QLGAMGIGECIHAYVKEQGIKLNCHLTTSLIDMYSKCGDIKKALDVFYSVGRRDVFVWSA 433

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF +M+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 434  MIAGLAMHGQGRDAIDLFSKMQE-TMIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 492

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++FI++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 493  YGIRPGIQHYSCMVDMLGRAGLLEEAVEFIEKMPILPSDSVWGALLGACQIHGNVEL 549



 Score =  126 bits (317), Expect = 2e-29
 Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G   +A  LF  + +   + PN +T+VG L+
Sbjct: 179 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEKAFQLFQEMEEE-GVKPNDVTMVGVLS 237

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++  ++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 238 ACAKKLDLELGRWVCSYIERKGIRVDLTLSNGMLDMYTKCGSLEDAKRLFDMMEEKDIVT 297

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 298 WTTMLDGYAKLGEYETAKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 357

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSAC+  G +  G    AY  E     G++        ++D+  + G +
Sbjct: 358 AKPDGITLVSALSACAQLGAMGIGECIHAYVKEQ----GIKLNCHLTTSLIDMYSKCGDI 413

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 414 KKALDVFYSVG-RRDVFVWSAMIAGLAMH 441



 Score =  107 bits (267), Expect = 9e-23
 Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + SWN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 76  SLDYARKVFDQIPKPNLHSWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 135

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 136 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 195

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  ++A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 196 SWNSMITGLAQRGCAEKAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLELGRWVCSY 254

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A K + +M  E D+  W   L
Sbjct: 255 IERKGIRVDLTLSNG----MLDMYTKCGSLEDA-KRLFDMMEEKDIVTWTTML 302


>ref|XP_016750661.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Gossypium hirsutum]
          Length = 733

 Score =  246 bits (627), Expect = 4e-73
 Identities = 115/237 (48%), Positives = 169/237 (71%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+ + D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+ACA
Sbjct: 312  AKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACA 371

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ G+ IH Y+   GIK +  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 372  QLGAMETGECIHAYVREQGIKFNCHLTTSLIDMYSKCGDIKKALDVFYSVDRRDVFVWSA 431

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF RM+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 432  MIAGLAMHGQGRDAIDLFSRMQEA-MIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 490

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++ I++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 491  YGIRPGVQHYSCMVDILGRAGLLEEAVEIIEKMPIPPSDSVWGALLGACQIHGNVEL 547



 Score =  127 bits (319), Expect = 1e-29
 Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G    A  LF  + +   + PN +T+VG L+
Sbjct: 177 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEMAFQLFQEMEEE-GVKPNDVTMVGVLS 235

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++ +++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 236 ACAKKLDLEFGRWVCSYIERKGIRVDLTLSNAMLDMYTKCGSLEDAKRLFDIMEEKDIVT 295

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 296 WTTMLDGYAKLGEYETAKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 355

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSAC+  G ++ G    AY  E     G++        ++D+  + G +
Sbjct: 356 AKPDGITLVSALSACAQLGAMETGECIHAYVREQ----GIKFNCHLTTSLIDMYSKCGDI 411

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 412 KKALDVFYSVD-RRDVFVWSAMIAGLAMH 439



 Score =  105 bits (261), Expect = 6e-22
 Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + +WN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 74  SLEYARKVFDQIPKPNLHTWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 133

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 134 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 193

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  + A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 194 SWNSMITGLAQRGCAEMAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLEFGRWVCSY 252

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A +    M  E D+  W   L
Sbjct: 253 IERKGIRVDLTLSN----AMLDMYTKCGSLEDAKRLFDIME-EKDIVTWTTML 300


>ref|XP_011623349.1| pentatricopeptide repeat-containing protein ELI1, chloroplastic
           [Amborella trichopoda]
          Length = 561

 Score =  241 bits (616), Expect = 6e-73
 Identities = 117/241 (48%), Positives = 163/241 (67%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L DAR LFDE    +   WN++I GY+++GH  E++ LF ++    ++ PN +T++  L+
Sbjct: 221 LDDARMLFDEMNERDAICWNAIIDGYTQHGHFSESLTLFQQMLSE-NIKPNEVTMLSVLS 279

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVA 379
           ACA LG +  GK +H YI NNG   +L ++T+LIDMY KCGS+E AR +F  M+ KD+VA
Sbjct: 280 ACAHLGALDSGKWLHAYIDNNGFSSNLFVSTALIDMYCKCGSLEDARSVFNAMLRKDVVA 339

Query: 378 WSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEM 199
           W+AM+ G+  +GQ  EA++LF+RM  +  L P ++ F  LL+ACSH+G +KEG      M
Sbjct: 340 WNAMVIGYAMHGQTIEALKLFNRMCGLG-LTPTDITFIGLLNACSHAGFVKEGQRLLQSM 398

Query: 198 KGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
           K  YG+EPK E Y CMVDLLGRAG L EA   +K M IEPD  +WGA L AC ++ N++L
Sbjct: 399 KEEYGIEPKIEHYGCMVDLLGRAGHLEEAYNLVKGMSIEPDPVIWGALLSACKLHGNVKL 458

Query: 18  G 16
           G
Sbjct: 459 G 459



 Score =  108 bits (270), Expect = 3e-23
 Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
 Frame = -1

Query: 729 ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
           AR LFD+     +  W ++I G + NG  +EA+ L+Y+++D   + PN+ T    L A +
Sbjct: 92  ARLLFDQVHEPNVFFWTAIIRGCALNGLYKEAILLYYQMQDG-GVEPNAYTFSSLLKAFS 150

Query: 549 ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAK------- 391
              +V+EG+A H ++    +  D  + +SLIDMY++ G +E AR+LF+ M+ K       
Sbjct: 151 MELLVREGEAAHGHVLKLQLGDDSFVQSSLIDMYARFGKLEAARQLFDQMLHKSIVSYTA 210

Query: 390 ------------------------DLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKP 283
                                   D + W+A+I G+  +G   E++ LF +M   N +KP
Sbjct: 211 MITCYTKRGELDDARMLFDEMNERDAICWNAIIDGYTQHGHFSESLTLFQQMLSEN-IKP 269

Query: 282 DNVIFTSLLSACSHSGMLKEG-W--AYFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEA 112
           + V   S+LSAC+H G L  G W  AY +      G          ++D+  + G L +A
Sbjct: 270 NEVTMLSVLSACAHLGALDSGKWLHAYIDN----NGFSSNLFVSTALIDMYCKCGSLEDA 325

Query: 111 LKFIKEMPIEPDVSVWGAFL 52
                 M +  DV  W A +
Sbjct: 326 RSVFNAM-LRKDVVAWNAMV 344



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL DAR +F+   R ++ +WN++++GY+ +G   EA+ LF R+     L P  IT +G L
Sbjct: 321 SLEDARSVFNAMLRKDVVAWNAMVIGYAMHGQTIEALKLFNRMCG-LGLTPTDITFIGLL 379

Query: 561 NACAALGVVKEGKAIHDYIANN-GIKVDLIINTSLIDMYSKCGSVETARELFEGM-MAKD 388
           NAC+  G VKEG+ +   +    GI+  +     ++D+  + G +E A  L +GM +  D
Sbjct: 380 NACSHAGFVKEGQRLLQSMKEEYGIEPKIEHYGCMVDLLGRAGHLEEAYNLVKGMSIEPD 439

Query: 387 LVAWSAMISGHGANGQVK 334
            V W A++S    +G VK
Sbjct: 440 PVIWGALLSACKLHGNVK 457



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
 Frame = -1

Query: 519 IHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSAMISGHGANGQ 340
           IH  I  NG+  + ++   L+  YS  G V  AR LF+ +   ++  W+A+I G   NG 
Sbjct: 60  IHASILRNGLDRNPLLQFKLLRSYSSSGLVNQARLLFDQVHEPNVFFWTAIIRGCALNGL 119

Query: 339 VKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGVYGLEPKNEQY 160
            KEAI L+ +M+    ++P+   F+SLL A S   +++EG A       V  L+  ++ +
Sbjct: 120 YKEAILLYYQMQD-GGVEPNAYTFSSLLKAFSMELLVREGEAAHGH---VLKLQLGDDSF 175

Query: 159 --ACMVDLLGRAGKLSEALKFIKEM 91
             + ++D+  R GKL  A +   +M
Sbjct: 176 VQSSLIDMYARFGKLEAARQLFDQM 200


>gb|PPR96716.1| hypothetical protein GOBAR_AA23966 [Gossypium barbadense]
          Length = 733

 Score =  245 bits (625), Expect = 8e-73
 Identities = 115/237 (48%), Positives = 169/237 (71%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+ + D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+ACA
Sbjct: 312  AKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACA 371

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ G+ IH Y+   GIK +  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 372  QLGAMETGECIHAYVREQGIKFNCHLTTSLIDMYSKCGDIKKALDVFYSVDRRDVFVWSA 431

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF RM+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 432  MIAGLAMHGQGRDAIDLFSRMQEA-MIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 490

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++ I++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 491  YGIRPGVQHYSCMVDILGRAGLLEEAVEIIEKMPILPSDSVWGALLGACQIHGNVEL 547



 Score =  127 bits (319), Expect = 1e-29
 Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G    A  LF  + +   + PN +T+VG L+
Sbjct: 177 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEMAFQLFQEMEEE-GVKPNDVTMVGVLS 235

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++ +++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 236 ACAKKLDLEFGRWVCSYIERKGIRVDLTLSNAMLDMYTKCGSLEDAKRLFDIMEEKDIVT 295

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 296 WTTMLDGYAKLGEYETAKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 355

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSAC+  G ++ G    AY  E     G++        ++D+  + G +
Sbjct: 356 AKPDGITLVSALSACAQLGAMETGECIHAYVREQ----GIKFNCHLTTSLIDMYSKCGDI 411

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 412 KKALDVFYSVD-RRDVFVWSAMIAGLAMH 439



 Score =  105 bits (261), Expect = 6e-22
 Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + +WN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 74  SLEYARKVFDQIPKPNLHTWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 133

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 134 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 193

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  + A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 194 SWNSMITGLAQRGCAEMAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLEFGRWVCSY 252

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A +    M  E D+  W   L
Sbjct: 253 IERKGIRVDLTLSN----AMLDMYTKCGSLEDAKRLFDIME-EKDIVTWTTML 300


>ref|XP_017647463.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic [Gossypium arboreum]
          Length = 733

 Score =  245 bits (625), Expect = 8e-73
 Identities = 115/237 (48%), Positives = 169/237 (71%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+ + D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+ACA
Sbjct: 312  AKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACA 371

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG ++ G+ IH Y+   GIK +  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 372  QLGAMETGECIHAYVREQGIKFNCHLTTSLIDMYSKCGDIKKALDVFYSVDRRDVFVWSA 431

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF RM+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 432  MIAGLAMHGQGRDAIDLFSRMQEA-MIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 490

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++ I++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 491  YGIRPGVQHYSCMVDILGRAGLLEEAVEIIEKMPILPSDSVWGALLGACQIHGNVEL 547



 Score =  127 bits (320), Expect = 8e-30
 Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G    A  LF  + +   + PN +T+VG L+
Sbjct: 177 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEMAFQLFQEMEEE-GVKPNDVTMVGVLS 235

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++ +++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 236 ACAKKLDLEFGRWVCSYIERKGIRVDLTLSNAMLDMYTKCGSLEDAKRLFDMMEEKDIVT 295

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 296 WTTMLDGYAKLGEYETAKLVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 355

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSAC+  G ++ G    AY  E     G++        ++D+  + G +
Sbjct: 356 AKPDGITLVSALSACAQLGAMETGECIHAYVREQ----GIKFNCHLTTSLIDMYSKCGDI 411

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 412 KKALDVFYSVD-RRDVFVWSAMIAGLAMH 439



 Score =  106 bits (264), Expect = 2e-22
 Identities = 71/233 (30%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + +WN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 74  SLEYARKVFDQIPKPNLHTWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 133

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 134 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 193

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  + A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 194 SWNSMITGLAQRGCAEMAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLEFGRWVCSY 252

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A K + +M  E D+  W   L
Sbjct: 253 IERKGIRVDLTLSN----AMLDMYTKCGSLEDA-KRLFDMMEEKDIVTWTTML 300


>gb|PPD87432.1| hypothetical protein GOBAR_DD15599 [Gossypium barbadense]
          Length = 735

 Score =  245 bits (625), Expect = 9e-73
 Identities = 114/237 (48%), Positives = 171/237 (72%)
 Frame = -1

Query: 729  ARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNACA 550
            A+++ D  PR ++ +WN+LI GY +NG  +EA+ L++ L+      P+ ITLV AL+AC+
Sbjct: 314  AKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQIAKPDGITLVSALSACS 373

Query: 549  ALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWSA 370
             LG +  G+ IH Y+   GIK++  + TSLIDMYSKCG ++ A ++F  +  +D+  WSA
Sbjct: 374  QLGAMGIGECIHAYVKEQGIKLNCHLTTSLIDMYSKCGDIKKALDVFYSVGRRDVFVWSA 433

Query: 369  MISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKGV 190
            MI+G   +GQ ++AI+LF +M+    +KP++V FT++L ACSH+G++KEG  +FN+M+ V
Sbjct: 434  MIAGLAMHGQGRDAIDLFSKMQE-TMIKPNSVTFTNVLCACSHAGLVKEGKTFFNQMEPV 492

Query: 189  YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            YG+ P  + Y+CMVD+LGRAG L EA++FI++MPI P  SVWGA LGAC I+ N+EL
Sbjct: 493  YGIRPGIQHYSCMVDMLGRAGLLEEAVEFIEKMPILPSDSVWGALLGACQIHGNVEL 549



 Score =  127 bits (320), Expect = 8e-30
 Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 34/269 (12%)
 Frame = -1

Query: 738 LVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALN 559
           L  A ++F      ++ SWNS+I G ++ G   +A  LF  + +   + PN +T+VG L+
Sbjct: 179 LDSAYRVFTMIGEKDVVSWNSMITGLAQRGCAEKAFQLFQEMEEE-GVKPNDVTMVGVLS 237

Query: 558 ACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV- 382
           ACA    ++ G+ +  YI   GI+VDL ++  ++DMY+KCGS+E A+ LF+ M  KD+V 
Sbjct: 238 ACAKKLDLELGRWVCSYIERKGIRVDLTLSNGMLDMYTKCGSLEDAKRLFDMMEEKDIVT 297

Query: 381 ------------------------------AWSAMISGHGANGQVKEAIELFDRMRRVNK 292
                                         AW+A+ISG+  NG+ KEA+ L+  +++   
Sbjct: 298 WTTMLDGYAKLGEYETAKQVLDTMPRQDIAAWNALISGYEQNGKSKEALSLYHELQQSQI 357

Query: 291 LKPDNVIFTSLLSACSHSGMLKEG---WAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKL 121
            KPD +   S LSACS  G +  G    AY  E     G++        ++D+  + G +
Sbjct: 358 AKPDGITLVSALSACSQLGAMGIGECIHAYVKEQ----GIKLNCHLTTSLIDMYSKCGDI 413

Query: 120 SEALKFIKEMPIEPDVSVWGAFLGACSIY 34
            +AL     +    DV VW A +   +++
Sbjct: 414 KKALDVFYSVG-RRDVFVWSAMIAGLAMH 441



 Score =  107 bits (267), Expect = 9e-23
 Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  ARK+FD+ P+  + SWN+LI  Y+ +    + + +F R+   +   PN  T    +
Sbjct: 76  SLDYARKVFDQIPKPNLHSWNTLIRVYASSPEPLQGILIFLRMVHESPYYPNKFTFPFVI 135

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLV 382
            A A +  +  G+A+H       +  D+ I+ SLI +Y  CG +++A  +F  +  KD+V
Sbjct: 136 KAAAEIFSLCVGQALHGLAIKASLGADVFISNSLIHLYLSCGDLDSAYRVFTMIGEKDVV 195

Query: 381 AWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEG-W-AYF 208
           +W++MI+G    G  ++A +LF  M     +KP++V    +LSAC+    L+ G W   +
Sbjct: 196 SWNSMITGLAQRGCAEKAFQLFQEMEE-EGVKPNDVTMVGVLSACAKKLDLELGRWVCSY 254

Query: 207 NEMKGV-YGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            E KG+   L   N     M+D+  + G L +A K + +M  E D+  W   L
Sbjct: 255 IERKGIRVDLTLSNG----MLDMYTKCGSLEDA-KRLFDMMEEKDIVTWTTML 302


>ref|XP_006485864.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Citrus sinensis]
          Length = 482

 Score =  239 bits (609), Expect = 9e-73
 Identities = 113/238 (47%), Positives = 170/238 (71%)
 Frame = -1

Query: 732 DARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGALNAC 553
           DAR +FD+    ++ SW S+I GY++NG+  E +  FY +RD   + PN ++++ AL AC
Sbjct: 63  DARVVFDKMSVRDLVSWTSMISGYAQNGYNSETLSFFYLMRD-LGVKPNRVSVLSALLAC 121

Query: 552 AALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGMMAKDLVAWS 373
             LG  ++G+  H Y+ + G + D+++ T+++DMY+KCGS++ A +LF+    KD+V WS
Sbjct: 122 GNLGASRKGEWFHSYVIHTGFESDVLVATAVMDMYAKCGSLDLAHKLFDQTEGKDVVCWS 181

Query: 372 AMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGMLKEGWAYFNEMKG 193
           AMI+ +G +GQ + AI+LFD M +   + P+++ FT +LSACSHSG+L+EG  YF  MKG
Sbjct: 182 AMIASYGFHGQGRTAIDLFDNMVKAG-VGPNDITFTCILSACSHSGLLEEGKRYFEAMKG 240

Query: 192 VYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFLGACSIYNNMEL 19
            +G+ PK   Y+CMVDLLGRAG++SEA K I+ MP+EPD S+WG+ LGAC IY N++L
Sbjct: 241 -FGIVPKLNNYSCMVDLLGRAGQVSEAEKLIENMPMEPDASLWGSLLGACRIYGNLDL 297



 Score =  102 bits (254), Expect = 3e-21
 Identities = 59/182 (32%), Positives = 96/182 (52%)
 Frame = -1

Query: 591 PNSITLVGALNACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETAREL 412
           P+      AL +CA L  ++ GK +H ++   G   D+ +N +L++MY+KCG+VE AR +
Sbjct: 8   PDKFAFPFALKSCAGLANLQIGKLVHQHLVCCGCDYDVFVNAALVNMYAKCGNVEDARVV 67

Query: 411 FEGMMAKDLVAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLSACSHSGM 232
           F+ M  +DLV+W++MISG+  NG   E +  F  MR +  +KP+ V   S L AC + G 
Sbjct: 68  FDKMSVRDLVSWTSMISGYAQNGYNSETLSFFYLMRDLG-VKPNRVSVLSALLACGNLGA 126

Query: 231 LKEGWAYFNEMKGVYGLEPKNEQYACMVDLLGRAGKLSEALKFIKEMPIEPDVSVWGAFL 52
            ++G  +F+      G E        ++D+  + G L  A K   +     DV  W A +
Sbjct: 127 SRKG-EWFHSYVIHTGFESDVLVATAVMDMYAKCGSLDLAHKLFDQTE-GKDVVCWSAMI 184

Query: 51  GA 46
            +
Sbjct: 185 AS 186



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
 Frame = -1

Query: 741 SLVDARKLFDEKPRSEMGSWNSLIMGYSRNGHLREAMGLFYRLRDHTDLCPNSITLVGAL 562
           SL  A KLFD+    ++  W+++I  Y  +G  R A+ LF  +     + PN IT    L
Sbjct: 161 SLDLAHKLFDQTEGKDVVCWSAMIASYGFHGQGRTAIDLFDNM-VKAGVGPNDITFTCIL 219

Query: 561 NACAALGVVKEGKAIHDYIANNGIKVDLIINTSLIDMYSKCGSVETARELFEGM-MAKDL 385
           +AC+  G+++EGK   + +   GI   L   + ++D+  + G V  A +L E M M  D 
Sbjct: 220 SACSHSGLLEEGKRYFEAMKGFGIVPKLNNYSCMVDLLGRAGQVSEAEKLIENMPMEPDA 279

Query: 384 VAWSAMISGHGANGQVKEAIELFDRMRRVNKLKPDNVIFTSLLS 253
             W +++      G +  A ++ D   R+ +L P N  +  LLS
Sbjct: 280 SLWGSLLGACRIYGNLDLAEKIAD---RIFQLDPFNSGYHVLLS 320