BLASTX nr result

ID: Ophiopogon26_contig00032138 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00032138
         (698 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK69625.1| uncharacterized protein A4U43_C05F24960 [Asparagu...    75   3e-12

>gb|ONK69625.1| uncharacterized protein A4U43_C05F24960 [Asparagus officinalis]
          Length = 268

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 49/115 (42%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 320 AGKRQPTAGKPIEKPSLTSRKPIERTLSTPTATREQXXXXXXXXXXXXXXXXXXTSLLPL 499
           + KRQP   KP+EKP   SRKP+ RTLSTP  +RE+                   SL+  
Sbjct: 49  SAKRQPLTKKPLEKPPSPSRKPV-RTLSTPITSRERSPRVPSPTPSPVPRPQRSNSLI-- 105

Query: 500 DKGAKSAARGVKTGSLTRSKSFEKRKAVAVS-SAHVDTSSASDSEASVIKKTELE 661
              + S      TG+ TRSKS +KRK V  S SA V+ SS SDSE +V KK + E
Sbjct: 106 -SKSTSLINKTSTGAYTRSKSLDKRKVVVASPSAFVEASSVSDSEVAVAKKAQQE 159


Top