BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00032002
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containi...   128   7e-32
ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-31
gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apos...   122   7e-30
ref|XP_020695322.1| pentatricopeptide repeat-containing protein ...   118   2e-28
ref|XP_020695320.1| pentatricopeptide repeat-containing protein ...   118   2e-28
ref|XP_020585876.1| pentatricopeptide repeat-containing protein ...   118   2e-28
ref|XP_020585869.1| pentatricopeptide repeat-containing protein ...   118   2e-28
ref|XP_020585861.1| pentatricopeptide repeat-containing protein ...   118   2e-28
ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-25
ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-23
gb|ERN18110.1| hypothetical protein AMTR_s01859p00006880, partia...    92   1e-20
gb|PIA59353.1| hypothetical protein AQUCO_00400323v1 [Aquilegia ...    96   2e-20
gb|POF12316.1| pentatricopeptide repeat-containing protein, chlo...    91   3e-20
ref|XP_007206426.1| pentatricopeptide repeat-containing protein ...    95   4e-20
gb|OVA06499.1| Pentatricopeptide repeat [Macleaya cordata]             94   5e-20
ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containi...    94   5e-20
ref|XP_017180276.1| PREDICTED: pentatricopeptide repeat-containi...    94   7e-20
gb|PON63025.1| DYW domain containing protein [Parasponia anderso...    94   7e-20
gb|KFK23272.1| hypothetical protein AALP_AAs55729U000100 [Arabis...    94   7e-20
ref|XP_009374255.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-19

>ref|XP_008795515.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Phoenix dactylifera]
          Length = 744

 Score =  128 bits (321), Expect = 7e-32
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           ++N +  R GDHP+L  LD YK+LD  +L+Q HA MLRL L SHPYSAS+LLTACSLSP 
Sbjct: 25  NDNEDRRRSGDHPVLAFLDGYKSLDAAQLRQTHARMLRLGLFSHPYSASRLLTACSLSPS 84

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
             L YAL +FDQIP PNLY+WNTLIRAHAS
Sbjct: 85  PDLRYALRMFDQIPHPNLYAWNTLIRAHAS 114


>ref|XP_010909905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Elaeis guineensis]
          Length = 741

 Score =  127 bits (319), Expect = 1e-31
 Identities = 61/89 (68%), Positives = 70/89 (78%)
 Frame = -3

Query: 359 NNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFR 180
           +N +  R GDHP+L   DDYK+LD  +L+QIHA MLRL L SHPYSAS+LLTACSLS   
Sbjct: 23  DNEDRRRSGDHPVLAFFDDYKSLDAAQLRQIHARMLRLGLFSHPYSASRLLTACSLSSSP 82

Query: 179 HLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
            L YAL +FDQIP PNLY+WNTLIRAHAS
Sbjct: 83  DLHYALRVFDQIPHPNLYTWNTLIRAHAS 111


>gb|PKA55094.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 736

 Score =  122 bits (306), Expect = 7e-30
 Identities = 60/91 (65%), Positives = 67/91 (73%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N     P DHP+L LLDDY  LD  R+KQIHA MLR DL SHPY+AS+LLTA   SP 
Sbjct: 17  SENGYRRLPVDHPILTLLDDYAALDDARVKQIHARMLRYDLFSHPYAASRLLTASFFSPS 76

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHASG 90
            +LPYAL +FDQIP+PNLYSWN  IRA ASG
Sbjct: 77  PNLPYALQMFDQIPRPNLYSWNVAIRAQASG 107


>ref|XP_020695322.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X2 [Dendrobium catenatum]
          Length = 712

 Score =  118 bits (296), Expect = 2e-28
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N     P DHP+L  LD++ TL    +K+IHA MLR+ L  HPY+AS+LLT+CS+SP 
Sbjct: 17  SENGRRRLPADHPILSFLDEHTTLSSAEIKKIHARMLRIGLFDHPYAASRLLTSCSISPS 76

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           R+L YA L+FDQIPQPNLYSWN LIRA++S
Sbjct: 77  RNLQYAHLVFDQIPQPNLYSWNILIRAYSS 106


>ref|XP_020695320.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X1 [Dendrobium catenatum]
 gb|PKU71494.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 736

 Score =  118 bits (296), Expect = 2e-28
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N     P DHP+L  LD++ TL    +K+IHA MLR+ L  HPY+AS+LLT+CS+SP 
Sbjct: 17  SENGRRRLPADHPILSFLDEHTTLSSAEIKKIHARMLRIGLFDHPYAASRLLTSCSISPS 76

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           R+L YA L+FDQIPQPNLYSWN LIRA++S
Sbjct: 77  RNLQYAHLVFDQIPQPNLYSWNILIRAYSS 106


>ref|XP_020585876.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X3 [Phalaenopsis equestris]
          Length = 682

 Score =  118 bits (295), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 68/90 (75%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N +   P DHP+L  LD++ TL    LK+IHA MLR DLL HPY+AS+LLT+ +LSP 
Sbjct: 18  SQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTSFALSPS 77

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           R+LPYAL LFDQIP PNLYSWN LIR+ AS
Sbjct: 78  RNLPYALRLFDQIPHPNLYSWNILIRSLAS 107


>ref|XP_020585869.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X2 [Phalaenopsis equestris]
          Length = 717

 Score =  118 bits (295), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 68/90 (75%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N +   P DHP+L  LD++ TL    LK+IHA MLR DLL HPY+AS+LLT+ +LSP 
Sbjct: 18  SQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTSFALSPS 77

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           R+LPYAL LFDQIP PNLYSWN LIR+ AS
Sbjct: 78  RNLPYALRLFDQIPHPNLYSWNILIRSLAS 107


>ref|XP_020585861.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic isoform X1 [Phalaenopsis equestris]
          Length = 738

 Score =  118 bits (295), Expect = 2e-28
 Identities = 57/90 (63%), Positives = 68/90 (75%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S N +   P DHP+L  LD++ TL    LK+IHA MLR DLL HPY+AS+LLT+ +LSP 
Sbjct: 18  SQNGSQRFPADHPILSFLDEHNTLTTADLKRIHARMLRFDLLRHPYAASRLLTSFALSPS 77

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           R+LPYAL LFDQIP PNLYSWN LIR+ AS
Sbjct: 78  RNLPYALRLFDQIPHPNLYSWNILIRSLAS 107


>ref|XP_009402292.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 749

 Score =  109 bits (273), Expect = 2e-25
 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
 Frame = -3

Query: 362 SNNSNSSRPG-DHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSP 186
           SNN    R   DHP+L LLDD++ LD   +++IHA MLRL LL HPYSAS+LL ACSLSP
Sbjct: 29  SNNLPVRRKAEDHPVLALLDDHRRLDADGIRRIHARMLRLGLLGHPYSASRLLAACSLSP 88

Query: 185 FRHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
              L YA  +FD IP PNL++WN +IRAHAS
Sbjct: 89  SADLRYARRVFDHIPAPNLFTWNIIIRAHAS 119


>ref|XP_010256585.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Nelumbo nucifera]
          Length = 742

 Score =  103 bits (258), Expect = 2e-23
 Identities = 52/89 (58%), Positives = 65/89 (73%)
 Frame = -3

Query: 356 NSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFRH 177
           N++  R  +H +L L+D  K  DM +LKQIHA MLR     HPYSAS+L+T C+LSPF  
Sbjct: 26  NNDDPRFDNHSVLSLID--KCSDMKQLKQIHAQMLRTGAFFHPYSASRLITMCTLSPFAS 83

Query: 176 LPYALLLFDQIPQPNLYSWNTLIRAHASG 90
           L YA  +FDQI QPN+Y+WNTLIRA+ASG
Sbjct: 84  LEYARRVFDQISQPNVYTWNTLIRAYASG 112


>gb|ERN18110.1| hypothetical protein AMTR_s01859p00006880, partial [Amborella
           trichopoda]
          Length = 190

 Score = 91.7 bits (226), Expect = 1e-20
 Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
 Frame = -3

Query: 359 NNSNSSRP--GDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSP 186
           NNSNSS     DHP L LL+  K  +  +L QIHAH++RL L+ HPY  S+LLT  +LS 
Sbjct: 22  NNSNSSSKQFSDHPSLILLERCK--NTKQLPQIHAHLIRLGLIFHPYPLSRLLTISALSN 79

Query: 185 FRH-LPYALLLFDQIPQPNLYSWNTLIRAHAS 93
             + L YAL +F+QIPQPNLY +NT+IRAHAS
Sbjct: 80  SENALSYALKIFEQIPQPNLYMYNTIIRAHAS 111


>gb|PIA59353.1| hypothetical protein AQUCO_00400323v1 [Aquilegia coerulea]
          Length = 730

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 52/91 (57%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
 Frame = -3

Query: 359 NNSNSSRP-GDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           NN N+ R   +HP+L L++     +  +LKQIHAHMLR+ L   PYS SKL+T  SL+PF
Sbjct: 35  NNYNNERYFANHPVLSLIEQCS--NTTQLKQIHAHMLRIGLFFDPYSVSKLITVSSLAPF 92

Query: 182 R-HLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
              L YA  +FDQIPQPNLY+WNTLIRA+AS
Sbjct: 93  STSLDYARKVFDQIPQPNLYTWNTLIRAYAS 123


>gb|POF12316.1| pentatricopeptide repeat-containing protein, chloroplastic [Quercus
           suber]
          Length = 188

 Score = 90.5 bits (223), Expect = 3e-20
 Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
 Frame = -3

Query: 356 NSNSSRPGDHPLLRLLDDYKTLDMP---------RLKQIHAHMLRLDLLSHPYSASKLLT 204
           +S S++P  +PL   +++ +   +P         +LKQ+HA MLR  L   P+SA KL+T
Sbjct: 14  HSKSNKPNLYPLSPTVNNDRYPILPLINQCNSTKQLKQVHAQMLRTGLFFDPFSAGKLIT 73

Query: 203 ACSLSPFRHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
           A +LSPF  L YA  LFDQIPQPNL++WNTLIRA+AS
Sbjct: 74  ASALSPFSSLDYARQLFDQIPQPNLFTWNTLIRAYAS 110


>ref|XP_007206426.1| pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Prunus persica]
 gb|ONH99940.1| hypothetical protein PRUPE_6G058800 [Prunus persica]
          Length = 738

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 49/87 (56%), Positives = 61/87 (70%)
 Frame = -3

Query: 353 SNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFRHL 174
           S   R   HP L L+D   ++   +LKQ+HA MLR  +L  PYSASKL+TA +LS F  L
Sbjct: 23  STDLRFSSHPALSLIDQCTSIK--QLKQVHAQMLRTGVLFDPYSASKLITASALSSFSSL 80

Query: 173 PYALLLFDQIPQPNLYSWNTLIRAHAS 93
            YA  +FDQIPQPN+Y+WNTLIRA+AS
Sbjct: 81  DYARQVFDQIPQPNVYTWNTLIRAYAS 107


>gb|OVA06499.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 726

 Score = 94.4 bits (233), Expect = 5e-20
 Identities = 49/91 (53%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           +NN N +  G HP+L L+D     D  ++KQ+HA MLR+ L   PYSAS+L+T C+LS F
Sbjct: 8   TNNQNRNLAG-HPILALIDQCS--DRSQVKQVHAQMLRIGLFFDPYSASRLITLCTLSTF 64

Query: 182 R-HLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
              + Y   +FDQIPQPNLY+WNTLIRA+AS
Sbjct: 65  SPDIEYTRKVFDQIPQPNLYTWNTLIRAYAS 95


>ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Prunus mume]
          Length = 738

 Score = 94.4 bits (233), Expect = 5e-20
 Identities = 49/87 (56%), Positives = 60/87 (68%)
 Frame = -3

Query: 353 SNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFRHL 174
           S   R   HP L L+D   ++   +LKQ+HA MLR   L  PYSASKL+TA +LS F  L
Sbjct: 23  STDLRLSSHPALSLIDQCTSIK--QLKQVHAQMLRTGALFDPYSASKLITASALSSFSSL 80

Query: 173 PYALLLFDQIPQPNLYSWNTLIRAHAS 93
            YA  +FDQIPQPN+Y+WNTLIRA+AS
Sbjct: 81  DYARQVFDQIPQPNVYTWNTLIRAYAS 107


>ref|XP_017180276.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Malus domestica]
          Length = 625

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = -3

Query: 290 DMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFRHLPYALLLFDQIPQPNLYSWNTL 111
           ++ +LKQ+HA MLR  LL  PYSASKL+T C+LS F  L YA  +FDQIPQPNLYSWNTL
Sbjct: 42  NIKQLKQVHAQMLRTGLLFDPYSASKLITVCALSSFSSLDYARQVFDQIPQPNLYSWNTL 101

Query: 110 IRAHAS 93
           IRA+AS
Sbjct: 102 IRAYAS 107


>gb|PON63025.1| DYW domain containing protein [Parasponia andersonii]
          Length = 739

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 51/90 (56%), Positives = 64/90 (71%)
 Frame = -3

Query: 362 SNNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPF 183
           S  +N  R  +HP+L  L D+ T  + +LKQIHA MLR  L   P+SAS+L+TA +LS F
Sbjct: 20  STVNNDHRFQNHPVLLSLIDHCT-SIKQLKQIHAQMLRKGLFFDPFSASRLITASALSSF 78

Query: 182 RHLPYALLLFDQIPQPNLYSWNTLIRAHAS 93
             L YA  +FDQIPQPNLY+WNTLIRA+AS
Sbjct: 79  SSLEYAHQVFDQIPQPNLYTWNTLIRAYAS 108


>gb|KFK23272.1| hypothetical protein AALP_AAs55729U000100 [Arabis alpina]
          Length = 739

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = -3

Query: 359 NNSNSSRPGDHPLLRLLDDYKTLDMPRLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFR 180
           N+  ++       + L+D  +  D+ +LKQIHAHM+R  L + PYSASKL    +LSPF 
Sbjct: 22  NHPTTNNERSRHTISLID--RCADLRQLKQIHAHMVRTGLFNDPYSASKLFAIAALSPFA 79

Query: 179 HLPYALLLFDQIPQPNLYSWNTLIRAHASG 90
            L YA  +FDQIPQPN +SWNTLIRA+ASG
Sbjct: 80  SLDYACKVFDQIPQPNSFSWNTLIRAYASG 109


>ref|XP_009374255.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Pyrus x bretschneideri]
          Length = 738

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = -3

Query: 281 RLKQIHAHMLRLDLLSHPYSASKLLTACSLSPFRHLPYALLLFDQIPQPNLYSWNTLIRA 102
           +LKQ+HA MLR  LL  PYSASKL+T C+LS F  L YA  +FDQIPQPNLYSWNTLIRA
Sbjct: 45  QLKQVHAQMLRTGLLFDPYSASKLITVCALSSFSSLDYARQVFDQIPQPNLYSWNTLIRA 104

Query: 101 HAS 93
           +AS
Sbjct: 105 YAS 107