BLASTX nr result
ID: Ophiopogon26_contig00031960
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00031960
(529 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_034745878.1| ribonuclease H [Bacillus wakoensis] >gi|5688... 64 4e-09
ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius] 62 2e-08
emb|CCQ98285.1| Ribonuclease H [[Clostridium] ultunense Esp] 62 2e-08
gb|PIE84792.1| ribonuclease H [Bacteroidia bacterium] 60 8e-08
ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038] ... 60 1e-07
ref|WP_027086178.1| ribonuclease H [Cohnella panacarvi] 60 1e-07
ref|WP_090639575.1| ribonuclease H [Paenibacillus sp. UNC496MF] ... 60 1e-07
ref|WP_010897036.1| MULTISPECIES: ribonuclease H [Bacillus] >gi|... 59 1e-07
ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans] 59 1e-07
ref|WP_090399368.1| ribonuclease H [Natribacillus halophilus] >g... 59 1e-07
ref|WP_076151705.1| ribonuclease H [Paenibacillus glucanolyticus... 59 2e-07
gb|ANY74285.1| ribonuclease H [Paenibacillus ihbetae] 59 2e-07
ref|WP_077568241.1| ribonuclease H [Paenibacillus ihbetae] >gi|1... 59 2e-07
ref|WP_076325316.1| MULTISPECIES: ribonuclease H [Paenibacillus]... 59 2e-07
ref|WP_071219710.1| ribonuclease H [Paenibacillus sp. LC231] >gi... 59 2e-07
ref|WP_006212819.1| MULTISPECIES: ribonuclease H [Paenibacillus]... 59 2e-07
ref|WP_096776881.1| ribonuclease H [Paenibacillus lautus] >gi|12... 59 2e-07
ref|WP_036663765.1| ribonuclease H [Paenibacillus sp. FSL H8-457] 59 2e-07
ref|WP_015737567.1| ribonuclease H [Paenibacillus sp. Y412MC10] ... 59 2e-07
ref|WP_023964466.1| ribonuclease HI-related protein 3 [Paenibaci... 59 2e-07
>ref|WP_034745878.1| ribonuclease H [Bacillus wakoensis]
dbj|GAE26346.1| ribonuclease HI-related protein 3 [Bacillus wakoensis JCM 9140]
Length = 206
Score = 63.5 bits (153), Expect = 4e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+ GR+PGIY W EC +QV FTGARFKS+ T+E+AE A+
Sbjct: 4 KKYYVVWKGRKPGIYLTWAECEAQVKGFTGARFKSFPTKEEAEAAY 49
>ref|WP_028986336.1| ribonuclease H [Thermicanus aegyptius]
Length = 218
Score = 62.0 bits (149), Expect = 2e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +3
Query: 390 KTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
K YVV+ GRRPGIY W EC Q++ F GAR+KS+ST+E+AE A+
Sbjct: 5 KYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49
>emb|CCQ98285.1| Ribonuclease H [[Clostridium] ultunense Esp]
Length = 218
Score = 62.0 bits (149), Expect = 2e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +3
Query: 390 KTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
K YVV+ GRRPGIY W EC Q++ F GAR+KS+ST+E+AE A+
Sbjct: 5 KYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAY 49
>gb|PIE84792.1| ribonuclease H [Bacteroidia bacterium]
Length = 210
Score = 60.1 bits (144), Expect = 8e-08
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
RK YVV+ G RPGIY W EC QV +TGA+F+S+ +RE+AE AF
Sbjct: 7 RKYYVVWAGHRPGIYETWAECKLQVEEYTGAKFRSFESREEAERAF 52
>ref|WP_042420732.1| ribonuclease H [Geomicrobium sp. JCM 19038]
dbj|GAK10059.1| ribonuclease HI-related protein 3 [Geomicrobium sp. JCM 19038]
Length = 210
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+ GR+PGIY W EC S+V F GARFKSY T E+A+ AF
Sbjct: 4 KKYYVVWKGRKPGIYTTWAECESEVKGFKGARFKSYPTYEEAKRAF 49
>ref|WP_027086178.1| ribonuclease H [Cohnella panacarvi]
Length = 215
Score = 59.7 bits (143), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VGR PGIY W EC QV+ F GA++KSY ++ +AE+A+
Sbjct: 4 QKYYVVWVGREPGIYVTWPECQKQVDQFEGAKYKSYESKAEAEVAY 49
>ref|WP_090639575.1| ribonuclease H [Paenibacillus sp. UNC496MF]
emb|SFI78237.1| ribonuclease HI [Paenibacillus sp. UNC496MF]
Length = 217
Score = 59.7 bits (143), Expect = 1e-07
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VGR+PG+Y W EC +Q+N F A+FKSY +R +AE A+
Sbjct: 4 QKFYVVWVGRKPGVYTSWGECQAQINKFDDAKFKSYESRSEAEDAY 49
>ref|WP_010897036.1| MULTISPECIES: ribonuclease H [Bacillus]
sp|Q9KEI9.1|RNH1_BACHD RecName: Full=Ribonuclease H; Short=RNase H
dbj|BAB04582.1| ribonuclease H-related protein [Bacillus halodurans C-125]
gb|KOO36351.1| ribonuclease H [Bacillus okuhidensis]
Length = 196
Score = 59.3 bits (142), Expect = 1e-07
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +3
Query: 390 KTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
K YVV+ GR+PGIY W C +QV +TGA+FKSY ++E+AE AF
Sbjct: 5 KYYVVWNGRKPGIYTSWSACEAQVKGYTGAKFKSYPSKEEAEAAF 49
>ref|WP_027847416.1| ribonuclease H [Marinococcus halotolerans]
Length = 196
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+ G++PGIY W EC QV F GARFKS+S+ E+AE AF
Sbjct: 4 KKWYVVWKGKKPGIYSTWAECEKQVKGFKGARFKSFSSYEEAETAF 49
>ref|WP_090399368.1| ribonuclease H [Natribacillus halophilus]
emb|SDJ11412.1| ribonuclease HI [Natribacillus halophilus]
Length = 198
Score = 59.3 bits (142), Expect = 1e-07
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 390 KTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
K YVV+ GR PGIY W EC QVN F GARFKS+++R++AE A+
Sbjct: 5 KYYVVWHGRTPGIYQTWAECQKQVNGFKGARFKSFTSRQEAERAY 49
>ref|WP_076151705.1| ribonuclease H [Paenibacillus glucanolyticus]
gb|OMF77168.1| ribonuclease H [Paenibacillus glucanolyticus]
Length = 216
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKFYVVWVGKVPGIYTSWTECQQQVNQFTGAKFKAFESRSEAEKAY 49
>gb|ANY74285.1| ribonuclease H [Paenibacillus ihbetae]
Length = 218
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN +TGA+FK++ +R +AE AF
Sbjct: 4 QKFYVVWVGKVPGIYTSWAECQQQVNQYTGAKFKAFESRSEAEQAF 49
>ref|WP_077568241.1| ribonuclease H [Paenibacillus ihbetae]
gb|OOC63534.1| ribonuclease H [Paenibacillus ihbetae]
Length = 219
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN +TGA+FK++ +R +AE AF
Sbjct: 4 QKFYVVWVGKVPGIYASWAECQQQVNQYTGAKFKAFESRSEAEQAF 49
>ref|WP_076325316.1| MULTISPECIES: ribonuclease H [Paenibacillus]
gb|OME89289.1| ribonuclease H [Paenibacillus lautus]
Length = 220
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49
>ref|WP_071219710.1| ribonuclease H [Paenibacillus sp. LC231]
gb|OIB03297.1| ribonuclease H [Paenibacillus sp. LC231]
Length = 220
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49
>ref|WP_006212819.1| MULTISPECIES: ribonuclease H [Paenibacillus]
gb|EFU38445.1| ribonuclease H-related protein [Paenibacillus vortex V453]
gb|ETT31251.1| ribonuclease H-like protein [Paenibacillus sp. FSL R5-808]
gb|ANA79573.1| ribonuclease H [Paenibacillus glucanolyticus]
gb|KZS45518.1| ribonuclease H [Paenibacillus glucanolyticus]
Length = 220
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKFYVVWVGKVPGIYTSWAECQQQVNQFTGAKFKAFESRSEAEKAY 49
>ref|WP_096776881.1| ribonuclease H [Paenibacillus lautus]
gb|PCL89776.1| ribonuclease H [Paenibacillus lautus]
Length = 221
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49
>ref|WP_036663765.1| ribonuclease H [Paenibacillus sp. FSL H8-457]
Length = 221
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49
>ref|WP_015737567.1| ribonuclease H [Paenibacillus sp. Y412MC10]
gb|ACX67863.1| ribonuclease H-related protein [Paenibacillus sp. Y412MC10]
Length = 221
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG+ PGIY W EC QVN FTGA+FK++ +R +AE A+
Sbjct: 4 QKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAY 49
>ref|WP_023964466.1| ribonuclease HI-related protein 3 [Paenibacillus sp. JCM 10914]
dbj|GAE08618.1| ribonuclease HI-related protein 3 [Paenibacillus sp. JCM 10914]
Length = 221
Score = 59.3 bits (142), Expect = 2e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +3
Query: 387 RKTYVVFVGRRPGIYYEWHECASQVN*FTGARFKSYSTREKAEIAF 524
+K YVV+VG PGIY W +C QVN FTGA+FK++ +R++AE AF
Sbjct: 4 QKYYVVWVGNVPGIYTSWGDCQQQVNQFTGAKFKAFESRDEAEKAF 49