BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031885
         (1004 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asp...   388   e-123
ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ana...   302   2e-90
ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isof...   301   4e-90
ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isof...   300   8e-90
ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polyme...   298   6e-89
gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas c...   296   2e-87
ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polyme...   289   1e-85
ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ana...   283   1e-83
ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isof...   281   7e-83
ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aeg...   280   2e-82
ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isof...   278   2e-81
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]       275   1e-80
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su...   273   7e-80
ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polyme...   272   2e-79
ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isof...   271   5e-79
gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indi...   270   9e-79
ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   269   3e-78
gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japo...   265   2e-77
ref|XP_015627028.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   265   4e-77
gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]       264   4e-76

>ref|XP_020269097.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
 ref|XP_020269098.1| probable RNA-dependent RNA polymerase 1 [Asparagus officinalis]
 gb|ONK67125.1| uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
          Length = 1128

 Score =  388 bits (997), Expect = e-123
 Identities = 188/276 (68%), Positives = 226/276 (81%), Gaps = 2/276 (0%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KTV VSGFPMNVTA+ VKNFLE+Y G+GSVFAVKVR+PK ++ RS+A+A+VQF TS+
Sbjct: 1   MGSKTVHVSGFPMNVTADSVKNFLEDYTGEGSVFAVKVRHPKVISTRSRAYALVQFFTSK 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
           DA  + +      Q + Y  +YLKV+Y  RDIVPKPRK+ F+LEDT LH+GCLI+E TLG
Sbjct: 61  DAKIVSSLAQ---QNFLYGNSYLKVEYAKRDIVPKPRKAWFILEDTELHIGCLISENTLG 117

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWSCT V VHFGF+MKKISF L QG+QS+KLELS+ESIWDIQQ    ++ SQFLV+QV+
Sbjct: 118 VLWSCTGVEVHFGFNMKKISFLLTQGSQSHKLELSFESIWDIQQHSLPSENSQFLVVQVQ 177

Query: 284 AAPRIYE--MPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYK 111
           AAPRI+E  +PLQ+S ++HEDPSLNY+KE QDDQWIRTTDFTP CSIGQSFA+CLELPY 
Sbjct: 178 AAPRIFEAPVPLQNSALVHEDPSLNYYKELQDDQWIRTTDFTPLCSIGQSFALCLELPYG 237

Query: 110 CHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           C LPDF   F Y+KKV  HF+LK T SYSR+ +LVP
Sbjct: 238 CRLPDFHD-FLYFKKVVSHFNLKRTHSYSRNSDLVP 272


>ref|XP_020089659.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
 ref|XP_020089661.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
          Length = 1133

 Score =  302 bits (773), Expect = 2e-90
 Identities = 147/277 (53%), Positives = 198/277 (71%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKTV + GFP++ +A+  KN LE +  DGSV+A+K+R PK  T +S+++A+VQFLT  
Sbjct: 1   MGGKTVNIHGFPLHASADYAKNILEGFISDGSVYALKLRQPKVTTGKSRSYAVVQFLTEG 60

Query: 644 DANTIFNELNE---KYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEE 474
            A  I    +    + Q Y     YLK +Y +RDIVPKPR SLFV+E   LH GC +++ 
Sbjct: 61  QAKQIIYLADNSLLRCQGY-----YLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKR 115

Query: 473 TLGVLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVI 294
           +  VLWS +DV V+FGF+++KI FFL +G+  YKLELSYESIW+IQ    S Q SQFL+ 
Sbjct: 116 SFCVLWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLF 175

Query: 293 QVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPY 114
           Q+ AAP+IYE+PL+ S ++ EDP LNYFKET DD+WIR+TDF+PSCS+GQS  ICL+LPY
Sbjct: 176 QMAAAPKIYELPLRSSSLVQEDPLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPY 235

Query: 113 KCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
              LP+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 236 DYELPNIREYFVFYEEFNGHYELNRGSSYSCNVELVP 272


>ref|XP_020089657.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
          Length = 1147

 Score =  301 bits (772), Expect = 4e-90
 Identities = 150/282 (53%), Positives = 198/282 (70%), Gaps = 3/282 (1%)
 Frame = -1

Query: 839 SFT*TMGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQ 660
           S T  MGGKTV + GFP++ + +  K+ LE + GDGSV+A+K+R P   T +S+++A+VQ
Sbjct: 10  SATEVMGGKTVNIHGFPLHASVDYAKDILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQ 69

Query: 659 FLTSRDANTIFNELNEKY---QQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGC 489
           FLT   A  I    +      Q Y     YLKV+Y  RDIVPKPR SLFV+E   LH GC
Sbjct: 70  FLTEGQAKRIIYLADNSLLMCQGY-----YLKVRYMKRDIVPKPRASLFVVEHATLHFGC 124

Query: 488 LIAEETLGVLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRS 309
            + + +  VLWS +DVRV+FGF+++KI FF+ QG+  YKLELSYESIW+IQ    S Q S
Sbjct: 125 PVLKRSFCVLWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGS 184

Query: 308 QFLVIQVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAIC 129
           QFL+ Q+ AAP+IYE+ L+ S ++HEDP LNYFKET DDQWIR+TDF+PSCS+GQS  IC
Sbjct: 185 QFLLFQMAAAPKIYELALRSSGLVHEDPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVIC 244

Query: 128 LELPYKCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           L+LPY   LP+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 245 LQLPYDYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVP 286


>ref|XP_020089658.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
          Length = 1133

 Score =  300 bits (769), Expect = 8e-90
 Identities = 148/277 (53%), Positives = 196/277 (70%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKTV + GFP++ + +  K+ LE + GDGSV+A+K+R P   T +S+++A+VQFLT  
Sbjct: 1   MGGKTVNIHGFPLHASVDYAKDILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEG 60

Query: 644 DANTIFNELNEKY---QQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEE 474
            A  I    +      Q Y     YLKV+Y  RDIVPKPR SLFV+E   LH GC + + 
Sbjct: 61  QAKRIIYLADNSLLMCQGY-----YLKVRYMKRDIVPKPRASLFVVEHATLHFGCPVLKR 115

Query: 473 TLGVLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVI 294
           +  VLWS +DVRV+FGF+++KI FF+ QG+  YKLELSYESIW+IQ    S Q SQFL+ 
Sbjct: 116 SFCVLWSASDVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGSQFLLF 175

Query: 293 QVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPY 114
           Q+ AAP+IYE+ L+ S ++HEDP LNYFKET DDQWIR+TDF+PSCS+GQS  ICL+LPY
Sbjct: 176 QMAAAPKIYELALRSSGLVHEDPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPY 235

Query: 113 KCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
              LP+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 236 DYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVP 272


>ref|XP_008812977.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera]
 ref|XP_008812978.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Phoenix
           dactylifera]
          Length = 1131

 Score =  298 bits (763), Expect = 6e-89
 Identities = 145/274 (52%), Positives = 195/274 (71%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KT+ + GFP   TA  VK FLE + G G+++A+K R PK VT +S+A+A+VQF+ ++
Sbjct: 1   MGSKTINIHGFPTTATAPSVKEFLEVHTGKGTIYALKFRLPKYVTAKSRAYAIVQFIANK 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A +I  +     +  +     LKV++ +RDIVPKPR SLFVLE+T +H G  +++    
Sbjct: 61  HAESIACK-----RLVWVDGFVLKVRHMERDIVPKPRTSLFVLENTTVHFGSPVSQNKFS 115

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWS  DVRV+FGF M+KI FFLVQG+ SYK EL+YESIW+IQ    S +  QFL+IQV 
Sbjct: 116 VLWSPKDVRVNFGFSMRKIYFFLVQGSHSYKFELAYESIWEIQLHHSSTKYLQFLLIQVV 175

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP++YE+ L++S ++HEDP  NYFK+  DDQW+RTTDF+P CSIGQS A+CL+L Y C 
Sbjct: 176 AAPKVYELSLRNSGLLHEDPEYNYFKDLPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCD 235

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+   YF +YK+  G F L+   SYSRSL+LVP
Sbjct: 236 LPNIRDYFPFYKEFEGRFDLERGSSYSRSLDLVP 269


>gb|OAY79234.1| RNA-dependent RNA polymerase 1, partial [Ananas comosus]
          Length = 3431

 Score =  296 bits (759), Expect = 2e-87
 Identities = 144/273 (52%), Positives = 195/273 (71%), Gaps = 3/273 (1%)
 Frame = -1

Query: 812  TVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSRDANT 633
            TV + GFP++ +A+  KN LE + GDGS++A+K+R PK  T +SK++A+VQFLT   A  
Sbjct: 2285 TVNIHGFPLHASADYAKNILEGFIGDGSIYALKLRQPKVTTGKSKSYAVVQFLTEGQAKQ 2344

Query: 632  IFNELNE---KYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLGV 462
            I    +    + Q Y     YLK +Y +RDIVPKPR SLFV+E   LH GC +++ +  V
Sbjct: 2345 IIYLADNCLLRCQGY-----YLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRSFCV 2399

Query: 461  LWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEA 282
            LWS +DV V+FGF+++KI FFL +G+  YKLELSYESIW+IQ    S Q SQFL+ Q+ A
Sbjct: 2400 LWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLLFQMAA 2459

Query: 281  APRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCHL 102
            AP+IYE+PL+ S ++ EDP LNYFKET DD+WIR+TDF+PSCS+GQS  ICL+LPY   L
Sbjct: 2460 APKIYELPLRSSSLVQEDPLLNYFKETPDDKWIRSTDFSPSCSMGQSSVICLQLPYDYEL 2519

Query: 101  PDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
            P+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 2520 PNIREYFVFYEEFNGHYELNRGSSYSCNVELVP 2552



 Score =  280 bits (715), Expect = 2e-81
 Identities = 141/277 (50%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGK V + GFP++ TA      LE + G GSV+A+++R P   T +S+A+A VQF+   
Sbjct: 38  MGGKMVNIYGFPLHATAYYAMKVLEGFIGGGSVYALQLRQPIVTTRKSEAYASVQFVREW 97

Query: 644 DANTIFNELNEKY---QQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEE 474
            A  I N  + +    Q Y     YL  QY +RDIVPKPR SLFV+E T +H GC +++ 
Sbjct: 98  QAELIVNMADNRLLRCQGY-----YLMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKR 152

Query: 473 TLGVLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVI 294
           +  VLWS  DV V FGF+++K+  F       YKLELSYESIW+IQ    S Q SQFL+I
Sbjct: 153 SFCVLWSAYDVHVTFGFNLRKLYLFFSMRGLEYKLELSYESIWEIQLHRSSYQGSQFLLI 212

Query: 293 QVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPY 114
           Q+ AAP+IYE+PL  S ++H+DP LNYFKET DDQWIR+TDF+PSCS+GQS  ICL+LPY
Sbjct: 213 QMAAAPKIYELPLCSSGLVHKDPFLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPY 272

Query: 113 KCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
              LP+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 273 DYELPNIHEYFVFYEEFNGHYELNRGYSYSCNMELVP 309



 Score =  268 bits (684), Expect = 2e-77
 Identities = 133/260 (51%), Positives = 181/260 (69%), Gaps = 7/260 (2%)
 Frame = -1

Query: 761  NFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSRDANTIFNELNE---KYQQYFY 591
            + LE + GDGSV+A+K+R P   T +S+++A+VQFLT   A  I    +    + Q Y  
Sbjct: 1170 DILEGFIGDGSVYALKLRQPAVTTQKSRSYAVVQFLTEGQAKQIIYLADNSLLRCQGY-- 1227

Query: 590  PKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLGVLWSCTDVRVHFGFDMKK 411
               YLK +Y  RDIVPKPR SLFV+E   LH GC + + +  VLWS +DVRV+FGF+++K
Sbjct: 1228 ---YLKARYMKRDIVPKPRASLFVVEHATLHFGCPVLKRSFCVLWSASDVRVNFGFNLRK 1284

Query: 410  ISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQF----LVIQVEAAPRIYEMPLQDSK 243
            I FF+ +G+  YKLELSYESIW+IQ    S Q + F    + +Q+ AAP+IYE+ L+ S 
Sbjct: 1285 IYFFVSKGSFEYKLELSYESIWEIQLHRSSDQETDFQFWFMKLQMAAAPKIYELALRSSG 1344

Query: 242  IIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCHLPDFPKYFFYYKKV 63
            ++HEDP LNYFKET DDQWIR+TDF+PSCS+GQS  ICL+LPY   LP+  +YF +Y++ 
Sbjct: 1345 LVHEDPLLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPYDYELPNISEYFLFYEEF 1404

Query: 62   AGHFSLKNTGSYSRSLELVP 3
             GH+ L +  SYS ++ELVP
Sbjct: 1405 DGHYELNSGSSYSCNMELVP 1424


>ref|XP_010917515.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
           [Elaeis guineensis]
 ref|XP_019704927.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
           [Elaeis guineensis]
 ref|XP_019704928.1| PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1
           [Elaeis guineensis]
          Length = 1129

 Score =  289 bits (740), Expect = 1e-85
 Identities = 144/274 (52%), Positives = 191/274 (69%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KT  + GFP   TA  VK FLE + G+G++FA+K R PK VT +S+A+A+VQF T+R
Sbjct: 1   MGSKTTNIHGFPTTATAPSVKAFLEVHTGEGTIFALKFRLPKYVTAKSRAYAIVQFTTNR 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A +I ++        +Y    LKV+  +RDIVPKPR SLF+LE+  LH G  +++    
Sbjct: 61  HAESIAHK-----HLVWYDGFVLKVRDVERDIVPKPRTSLFILENATLHFGSPVSQNKFS 115

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWS  DV+V+FGF+++KI FFL +G  SYK EL+YESIW+IQ    S Q  QFL+IQV 
Sbjct: 116 VLWSAMDVKVNFGFNLRKIYFFLSRGGHSYKFELAYESIWEIQLHRSSTQHLQFLLIQVV 175

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP+IYE+  ++S ++ EDP  NYFK+  DDQW+RTTDF+P CSIGQS A+CL+L Y C 
Sbjct: 176 AAPKIYELFPRNSGLLLEDPIYNYFKDPPDDQWVRTTDFSPLCSIGQSSALCLQLSYDCD 235

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+   YF +YK+  GHF L+   SYS SL+LVP
Sbjct: 236 LPNIRDYFVFYKESEGHFDLERGISYSCSLDLVP 269


>ref|XP_020090854.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
 ref|XP_020090855.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
 ref|XP_020090856.1| probable RNA-dependent RNA polymerase 1 [Ananas comosus]
          Length = 1133

 Score =  283 bits (725), Expect = 1e-83
 Identities = 143/277 (51%), Positives = 188/277 (67%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGK V + GFP++ TA   K  LE + G  SV+A+++R P   T +S+A+A VQF+T  
Sbjct: 1   MGGKMVNIYGFPLHATACYAKKVLEGFIGGESVYALQLRQPIVTTRKSEAYASVQFVTEW 60

Query: 644 DANTIFNELNEKY---QQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEE 474
            A  I N  + +    Q Y     YL  QY +RDIVPKPR SLFV+E T +H GC +++ 
Sbjct: 61  QAELIVNMADNRLLRCQGY-----YLMAQYMERDIVPKPRSSLFVVERTIVHFGCPVSKR 115

Query: 473 TLGVLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVI 294
           +  VLWS  DV V FGF+++K+  F   G   YKLELSYESIW+IQ    S Q SQFL+I
Sbjct: 116 SFCVLWSAYDVHVTFGFNLRKLYLFFSMGGLEYKLELSYESIWEIQLHRSSYQGSQFLLI 175

Query: 293 QVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPY 114
           Q+ AAP+IYE+PL  S ++H+DP LNYFKET DDQWIR+TDF+PSCS+GQS  ICL+LPY
Sbjct: 176 QMAAAPKIYELPLCSSGLVHKDPFLNYFKETPDDQWIRSTDFSPSCSMGQSSVICLQLPY 235

Query: 113 KCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
              LP+  +YF +Y++  GH+ L    SYS ++ELVP
Sbjct: 236 DYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVP 272


>ref|XP_020584591.1| probable RNA-dependent RNA polymerase 1 isoform X2 [Phalaenopsis
           equestris]
          Length = 1140

 Score =  281 bits (720), Expect = 7e-83
 Identities = 141/274 (51%), Positives = 191/274 (69%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           +GGKT+QVSGFP++ TA  VK  LE Y G+GSVFAVK+R+PK +   SKAFA+VQF++S 
Sbjct: 11  IGGKTIQVSGFPLHTTAIQVKECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISST 70

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A  +  +   + Q+  + K+YL  +  +RDIVPKP  +  V+ED  +H GC I+E+ L 
Sbjct: 71  GATKV--KYMTRQQRLCFEKSYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLY 128

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           +LW+  D R+ FGF+++KIS F    +  YKLELSYESIW+IQ     AQR +FL IQV+
Sbjct: 129 ILWTARDARIEFGFNLRKISLFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQVQ 188

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP++Y MP Q+S  I+E+P+LNY+K + D+QW+RTTDFTP CSIGQS  ICL+LP K  
Sbjct: 189 AAPKLYMMPSQNSFAIYENPALNYYKHSTDEQWLRTTDFTPQCSIGQSSTICLQLPIKSD 248

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+  + F Y+K+V  +  L N  SYS    LVP
Sbjct: 249 LPNIKENFVYFKEVDAYLDLVNGRSYSYDFHLVP 282


>ref|XP_020170071.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
           tauschii]
 ref|XP_020170072.1| probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
           tauschii]
          Length = 1116

 Score =  280 bits (716), Expect = 2e-82
 Identities = 137/274 (50%), Positives = 187/274 (68%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKT+QVSGFP  V A+ VK+ LE   G G+VFA+K+R PK ++  SK+FA+VQF +  
Sbjct: 1   MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N       +      +LK +Y +RDIVP+PR ++F L+D  LH GCL+ E+ L 
Sbjct: 61  HASLVLNAARRNALRS--GSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWS T+V V FGF MK+I F L+  ++ YKLELSYESIW+IQ   P   + +FL+IQV+
Sbjct: 119 VLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQ 178

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP+IYE  ++ S  +++DP  NYF++  DDQW RTTDFTPS SIGQS+ +CLELP+ C+
Sbjct: 179 AAPKIYEQNIRRSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICY 238

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+  +YF YY+     F L+   SYS +   VP
Sbjct: 239 LPNIREYFVYYEVHDDVFHLQRGHSYSSNTCFVP 272


>ref|XP_020675734.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Dendrobium
           catenatum]
          Length = 1145

 Score =  278 bits (710), Expect = 2e-81
 Identities = 143/273 (52%), Positives = 183/273 (67%)
 Frame = -1

Query: 821 GGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSRD 642
           GGKT+QVSGFP+N TA  V  FLE + G+GSVFA+K+R+PK +   SKAFA+VQF++S  
Sbjct: 12  GGKTIQVSGFPLNTTALQVTEFLEKFTGEGSVFALKLRHPKIIKATSKAFAIVQFVSSAG 71

Query: 641 ANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLGV 462
           A  I N +    ++ ++   YL  +  D DIVPKP  S  V+ED  +H GC IAE  L +
Sbjct: 72  AIDIKNMIC--LRRLWFQGYYLTSKDVDHDIVPKPSTSSHVMEDVIVHFGCQIAENKLYI 129

Query: 461 LWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVEA 282
           LW+  DVR+ FGF+++KI  F+   +  YKLEL YESIW+IQ      QR QFL IQV+A
Sbjct: 130 LWTVKDVRIEFGFNLRKICLFISYKDCLYKLELFYESIWEIQLCHSVTQRCQFLQIQVQA 189

Query: 281 APRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCHL 102
           AP++Y MP Q+S  +HE P  NYFK + DDQWIRTTDFTPSCSIGQS  ICL+LPY+  L
Sbjct: 190 APKVYVMPPQNSYAMHEGPDFNYFKHSTDDQWIRTTDFTPSCSIGQSSTICLQLPYQYDL 249

Query: 101 PDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           P+    F Y+++   H  L    SYS  L LVP
Sbjct: 250 PNIKDNFVYFREDYCHLDLVKGSSYSYDLGLVP 282


>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
          Length = 1115

 Score =  275 bits (703), Expect = 1e-80
 Identities = 137/274 (50%), Positives = 186/274 (67%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKT+QVSGFP  V A+ VK+ LE   G G+VFAVK+R PK ++  S++FA+VQF +  
Sbjct: 1   MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N       +      YLK +Y +RDIVP+PR ++F L+   LH GCL+ E  L 
Sbjct: 61  HASLVLNAAQRNALRS--GSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWS T+V V FGF MK+I F L+  ++ YKLELSYESIW+IQ   P   + +FL+IQV+
Sbjct: 119 VLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQ 178

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP+IYE  ++ S  +++DP  NYF++  DDQW RTTDFTPS SIGQS+ +CLELP+ C+
Sbjct: 179 AAPKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICY 238

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+  +YF YY+     F+L+   SYS +   VP
Sbjct: 239 LPNIREYFVYYEVHNDIFNLQPGYSYSSNTCFVP 272


>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
          Length = 1115

 Score =  273 bits (698), Expect = 7e-80
 Identities = 137/274 (50%), Positives = 185/274 (67%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKT+QVSGFP  V A+ VK+ LE   G G+VFAVK+R PK ++  S++FA+VQF +  
Sbjct: 1   MGGKTLQVSGFPSTVNADHVKDLLEQIVGTGNVFAVKLRPPKNISANSRSFAIVQFQSEA 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N       +      YLK +Y +RDIVP+PR ++F L+   LH GCL+ E  L 
Sbjct: 61  HASLVLNAAQRNALRS--GSHYLKARYAERDIVPRPRTTIFNLQGAKLHFGCLLKERVLS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VLWS TDV V FGF MK+I F L+  ++ YKLELSYESIW+IQ   P   + +FL+IQV+
Sbjct: 119 VLWSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQ 178

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP+IYE  ++ S  +++DP  NYF++  DDQW RTTDFTPS SIGQS+ + LELP+ C+
Sbjct: 179 AAPKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILSLELPHICY 238

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+  +YF YY+     F+L+   SYS +   VP
Sbjct: 239 LPNIREYFVYYEVHNDIFNLQPGYSYSSNTCFVP 272


>ref|XP_009381445.1| PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
           subsp. malaccensis]
          Length = 1134

 Score =  272 bits (695), Expect = 2e-79
 Identities = 139/274 (50%), Positives = 189/274 (68%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           M  KT+Q+S FP   TA+ V  FLE Y G+GSV A+K+R  K  T     +A+VQF    
Sbjct: 1   MTSKTIQISRFPSYATAKQVTVFLEKYTGEGSVIALKLRPSKNST----VYAIVQFPRRE 56

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
           D   +F  + +   +  Y   YL V+  +RDI+PKPRK LFVLE+  LH GC ++++ L 
Sbjct: 57  DVQDLFVMIQQG--KLSYDGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQKRLS 114

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQVE 285
           VL S  DV+V+FGF+M+KI F L  G  SYKLEL+YESIW+I+    S Q SQFLV+QV 
Sbjct: 115 VLRSMEDVKVNFGFEMRKIYFLLSHGIHSYKLELAYESIWEIRLHRSSVQNSQFLVVQVV 174

Query: 284 AAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYKCH 105
           AAP+IYE P +++  ++EDP LNYF++  DDQW+RTTDFT S SIGQS A+CL+LP++C 
Sbjct: 175 AAPKIYETPSRNTGSLYEDPRLNYFRDLPDDQWVRTTDFTSSRSIGQSCALCLQLPFECS 234

Query: 104 LPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           LP+  +YF ++ +V GH+ L+   SYSR+L+LVP
Sbjct: 235 LPNIREYFVHFIEVDGHYDLERGYSYSRNLDLVP 268


>ref|XP_020584589.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
           equestris]
 ref|XP_020584590.1| probable RNA-dependent RNA polymerase 1 isoform X1 [Phalaenopsis
           equestris]
          Length = 1156

 Score =  271 bits (693), Expect = 5e-79
 Identities = 141/290 (48%), Positives = 191/290 (65%), Gaps = 16/290 (5%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           +GGKT+QVSGFP++ TA  VK  LE Y G+GSVFAVK+R+PK +   SKAFA+VQF++S 
Sbjct: 11  IGGKTIQVSGFPLHTTAIQVKECLEYYTGEGSVFAVKLRHPKVIKSTSKAFAIVQFISST 70

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A  +  +   + Q+  + K+YL  +  +RDIVPKP  +  V+ED  +H GC I+E+ L 
Sbjct: 71  GATKV--KYMTRQQRLCFEKSYLTSRDVERDIVPKPITASHVMEDVIVHFGCQISEKKLY 128

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVIQ-- 291
           +LW+  D R+ FGF+++KIS F    +  YKLELSYESIW+IQ     AQR +FL IQ  
Sbjct: 129 ILWTARDARIEFGFNLRKISLFTSWEDCLYKLELSYESIWEIQLYHSVAQRCRFLQIQAS 188

Query: 290 --------------VEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCS 153
                         V+AAP++Y MP Q+S  I+E+P+LNY+K + D+QW+RTTDFTP CS
Sbjct: 189 RCDSLFLIWSTIRQVQAAPKLYMMPSQNSFAIYENPALNYYKHSTDEQWLRTTDFTPQCS 248

Query: 152 IGQSFAICLELPYKCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           IGQS  ICL+LP K  LP+  + F Y+K+V  +  L N  SYS    LVP
Sbjct: 249 IGQSSTICLQLPIKSDLPNIKENFVYFKEVDAYLDLVNGRSYSYDFHLVP 298


>gb|EAY87440.1| hypothetical protein OsI_08849 [Oryza sativa Indica Group]
          Length = 1067

 Score =  270 bits (689), Expect = 9e-79
 Identities = 141/277 (50%), Positives = 186/277 (67%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KT+QVSGF ++ +A+ VK+ LE   G G+V+AVK+R+PK VT  S+A+A+VQF T  
Sbjct: 1   MGVKTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEE 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N    K  +  +   YLKV   DRDIVP+PR S+F LED  LH GCL+ E  L 
Sbjct: 61  HASLVKNAAQRKILRRGH--YYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQ 291
            LWS T V V FGF++KKI F+L   N S  YKLELSYESIW+IQ + P   +++FL+IQ
Sbjct: 119 ALWSRTGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSYESIWEIQLQRPPKSQTKFLLIQ 178

Query: 290 VEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYK 111
           V+AAP+IYE   + S +++EDP  NYF++  DDQW RTTDFT S SIGQS+ +CLE+P +
Sbjct: 179 VQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRR 238

Query: 110 CHLPDFPKYFFYYKKVAGHFSLKNTG-SYSRSLELVP 3
           C LP+   YFFYY +    F  ++ G  YS     VP
Sbjct: 239 CDLPNIRDYFFYYHEYNHDFECRSGGYPYSSDTRFVP 275


>ref|XP_010236147.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
           polymerase 1 [Brachypodium distachyon]
          Length = 1117

 Score =  269 bits (687), Expect = 3e-78
 Identities = 144/276 (52%), Positives = 179/276 (64%), Gaps = 2/276 (0%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKT+Q+SGFP NV A+ VK+ LE   G G+V+AVK+R PK +T  S++FA+VQF T  
Sbjct: 1   MGGKTLQISGFPANVHADHVKDLLEQIVGAGNVYAVKLRPPKNITANSRSFAIVQFQTEE 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N              YLKV+  +RDIVP+PR ++F L    L   CL+ E  L 
Sbjct: 61  YASLVENAAXRNVLST--ESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKENVLS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQ--FLVIQ 291
           VLWS TDV V FGFDMKKI F+L    + YKLELSYESIW+IQ   P A RSQ  FL+IQ
Sbjct: 119 VLWSGTDVSVEFGFDMKKIYFYLEC--RKYKLELSYESIWEIQLHRPPAYRSQKKFLLIQ 176

Query: 290 VEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYK 111
           VEAAP+IYE+  + +  + EDP  NYF++  DDQW RTTDFTPS SIGQSF +CLELPY 
Sbjct: 177 VEAAPKIYELNQRRAGFMFEDPLFNYFRDDTDDQWTRTTDFTPSASIGQSFILCLELPYH 236

Query: 110 CHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
             LP    YF YY++    F  ++  SYS     VP
Sbjct: 237 HDLPKIRDYFVYYEEHNDDFHCRSGHSYSCDTRFVP 272


>gb|EEE57765.1| hypothetical protein OsJ_08301 [Oryza sativa Japonica Group]
          Length = 1027

 Score =  265 bits (678), Expect = 2e-77
 Identities = 139/277 (50%), Positives = 185/277 (66%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KT+QVSGF ++ +A+ VK+ LE   G G+V+AVK+R+PK VT  S+A+A+VQF T  
Sbjct: 1   MGVKTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEE 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N    K  +  +   YLKV   DRDIVP+PR S+F LED  LH GCL+ E  L 
Sbjct: 61  HASLVKNAAQRKILRRGH--YYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQ 291
            LWS   V V FGF++KKI F+L   N S  YKLELS+ESIW+IQ + P   +++FL+IQ
Sbjct: 119 ALWSRKGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQ 178

Query: 290 VEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYK 111
           V+AAP+IYE   + S +++EDP  NYF++  DDQW RTTDFT S SIGQS+ +CLE+P +
Sbjct: 179 VQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRR 238

Query: 110 CHLPDFPKYFFYYKKVAGHFSLKNTG-SYSRSLELVP 3
           C LP+   YFFYY +    F  ++ G  YS     VP
Sbjct: 239 CDLPNIRDYFFYYHEYNHDFECRSGGYPYSSDTRFVP 275


>ref|XP_015627028.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
           polymerase 1 [Oryza sativa Japonica Group]
          Length = 1106

 Score =  265 bits (678), Expect = 4e-77
 Identities = 139/277 (50%), Positives = 185/277 (66%), Gaps = 3/277 (1%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MG KT+QVSGF ++ +A+ VK+ LE   G G+V+AVK+R+PK VT  S+A+A+VQF T  
Sbjct: 1   MGVKTLQVSGFALDDSADYVKDLLERIVGCGNVYAVKLRHPKNVTATSRAYAIVQFQTEE 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N    K  +  +   YLKV   DRDIVP+PR S+F LED  LH GCL+ E  L 
Sbjct: 61  HASLVKNAAQRKILRRGH--YYLKVHPSDRDIVPRPRVSMFKLEDVTLHFGCLLKETILS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQS--YKLELSYESIWDIQQRCPSAQRSQFLVIQ 291
            LWS   V V FGF++KKI F+L   N S  YKLELS+ESIW+IQ + P   +++FL+IQ
Sbjct: 119 ALWSRKGVSVEFGFNLKKIYFYLQLPNSSIEYKLELSHESIWEIQLQRPPKSQTKFLLIQ 178

Query: 290 VEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTTDFTPSCSIGQSFAICLELPYK 111
           V+AAP+IYE   + S +++EDP  NYF++  DDQW RTTDFT S SIGQS+ +CLE+P +
Sbjct: 179 VQAAPKIYEQTPRRSGVMYEDPLFNYFRDHTDDQWTRTTDFTSSSSIGQSYILCLEVPRR 238

Query: 110 CHLPDFPKYFFYYKKVAGHFSLKNTG-SYSRSLELVP 3
           C LP+   YFFYY +    F  ++ G  YS     VP
Sbjct: 239 CDLPNIRDYFFYYHEYNHDFECRSGGYPYSSDTRFVP 275


>gb|EMS66194.1| RNA-dependent RNA polymerase 1 [Triticum urartu]
          Length = 1252

 Score =  264 bits (674), Expect = 4e-76
 Identities = 136/297 (45%), Positives = 186/297 (62%), Gaps = 23/297 (7%)
 Frame = -1

Query: 824 MGGKTVQVSGFPMNVTAEGVKNFLENYAGDGSVFAVKVRYPKTVTPRSKAFAMVQFLTSR 645
           MGGKT+QVSGFP  V A+ VK+ LE   G G+VFA+K+R PK ++  SK+FA+VQF +  
Sbjct: 1   MGGKTIQVSGFPSTVNADHVKDLLEKIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA 60

Query: 644 DANTIFNELNEKYQQYFYPKTYLKVQYKDRDIVPKPRKSLFVLEDTALHLGCLIAEETLG 465
            A+ + N       +      +LK +Y +RDIVP+PR ++F L+D  LH GCL+ E+ L 
Sbjct: 61  HASLVLNAARRNALRS--GSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKVLS 118

Query: 464 VLWSCTDVRVHFGFDMKKISFFLVQGNQSYKLELSYESIWDIQQRCPSAQRSQFLVI--- 294
           VLWS T+V V FGF MK+I F L+  ++ YKLELSYESIW+IQ   P   + +FL+I   
Sbjct: 119 VLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQLF 178

Query: 293 --------------------QVEAAPRIYEMPLQDSKIIHEDPSLNYFKETQDDQWIRTT 174
                               QV+AAP+IYE  ++ S  +++DP  NY ++  DDQW RTT
Sbjct: 179 LFIESSEIFVNLSWRNVSVSQVQAAPKIYEQNIRRSGSMYDDPLFNYSRDDTDDQWTRTT 238

Query: 173 DFTPSCSIGQSFAICLELPYKCHLPDFPKYFFYYKKVAGHFSLKNTGSYSRSLELVP 3
           DFTPS SIGQS+ +CLELP+ C+LP+  +YF YY+     F L+   SYS +   VP
Sbjct: 239 DFTPSASIGQSYILCLELPHICYLPNIREYFVYYEVHDDVFHLQRGHSYSSNTCFVP 295