BLASTX nr result

ID: Ophiopogon26_contig00031787 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031787
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020690782.1| E3 ubiquitin-protein ligase UPL4 [Dendrobium...    83   3e-15
ref|XP_008783678.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    81   1e-14
ref|XP_010922508.1| PREDICTED: E3 ubiquitin-protein ligase UPL4 ...    79   4e-14
ref|XP_020579574.1| E3 ubiquitin-protein ligase UPL4 [Phalaenops...    76   5e-13
gb|PKA51906.1| E3 ubiquitin-protein ligase UPL4 [Apostasia shenz...    76   7e-13
ref|XP_008805036.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    75   2e-12

>ref|XP_020690782.1| E3 ubiquitin-protein ligase UPL4 [Dendrobium catenatum]
 ref|XP_020690783.1| E3 ubiquitin-protein ligase UPL4 [Dendrobium catenatum]
 gb|PKU64336.1| E3 ubiquitin-protein ligase UPL4 [Dendrobium catenatum]
          Length = 1522

 Score = 82.8 bits (203), Expect = 3e-15
 Identities = 55/127 (43%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSSSA-RPEPATATVLMECXXXXXXXXXXXXXX------- 315
           MDRGRKRPE +D  PADKRACSSS  RP  A A   +                       
Sbjct: 1   MDRGRKRPEVADQLPADKRACSSSEFRPTTADAVAAVSSSSTSSVPPPSSSEHHDCDMES 60

Query: 316 --------PNGYGSCDSDSDPDPAEYHHDHHNPAHSGASRSKFQQIIAGLGGDEAGPSAI 471
                    + YGSC+SD D       H H  PA  GASR +FQ+II+ L  ++AGPSA 
Sbjct: 61  SSSGRGGGDSAYGSCESDDDL------HHHQPPAVCGASRGRFQRIISVLDSEDAGPSAQ 114

Query: 472 LAFLTEL 492
           LA LTEL
Sbjct: 115 LASLTEL 121


>ref|XP_008783678.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Phoenix
           dactylifera]
 ref|XP_008783679.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Phoenix
           dactylifera]
 ref|XP_008783680.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Phoenix
           dactylifera]
          Length = 1548

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 55/128 (42%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSS-----------SARPEPATATVL------MECXXXXX 288
           MDRGRKR E  +  PADKRACSS           SA P  A A  +       EC     
Sbjct: 1   MDRGRKRAEAGEQMPADKRACSSAEYRPGSSSLASAPPSAAGAAAVASSSEPAECDMESS 60

Query: 289 XXXXXXXXXPNGYGSCDSDSDPDPAEYHHDHHNPAHSGASRSKFQQIIAGLGGDEAGPSA 468
                     + YGSCDSD +PD      D   P+  GAS++KFQ+I A L  D+AGP A
Sbjct: 61  SSGRSDRAGDSAYGSCDSDDEPDHGRGGFD--GPSRCGASKAKFQRIFASL-EDDAGPGA 117

Query: 469 ILAFLTEL 492
            LA LTEL
Sbjct: 118 QLAALTEL 125


>ref|XP_010922508.1| PREDICTED: E3 ubiquitin-protein ligase UPL4 [Elaeis guineensis]
          Length = 1545

 Score = 79.3 bits (194), Expect = 4e-14
 Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSS---------------SARPEPATATVLMECXXXXXXX 294
           MDRGRKR E  D  PADKRACSS               SA    A+++   +C       
Sbjct: 1   MDRGRKRAEAGDQMPADKRACSSSEFRPGSSSLPLAPPSAVAGAASSSEPADCDMESSSS 60

Query: 295 XXXXXXXPNGYGSCDSDSDPDPAEYHHDHHNPAHSGASRSKFQQIIAGLGGDEAGPSAIL 474
                   + YGSCDSD +PD      D  +P+  GAS++KFQ+I A L  D+AGP A +
Sbjct: 61  GRSDRAGDSAYGSCDSDDEPDHVRGGFD--DPSRCGASKAKFQRIFASL-EDDAGPGAQV 117

Query: 475 AFLTEL 492
           A LTEL
Sbjct: 118 AALTEL 123


>ref|XP_020579574.1| E3 ubiquitin-protein ligase UPL4 [Phalaenopsis equestris]
          Length = 1542

 Score = 76.3 bits (186), Expect = 5e-13
 Identities = 54/128 (42%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSSSA-RPEPATATVLMECXXXXXXXXXXXXXXP------ 318
           MDRGRKR E +D  PADKRACSSS  R   A     +                P      
Sbjct: 1   MDRGRKRSEVADQLPADKRACSSSEFRLATADVVAAVSASSTSSIPPPLSFEHPDCDMES 60

Query: 319 ---------NGYGSCDSDSDPDPAEYHHDHHNP-AHSGASRSKFQQIIAGLGGDEAGPSA 468
                    + YGSC+SD DP        HH P A  GASR KFQ+II+ L  ++AGPS 
Sbjct: 61  SSSGRGGGDSAYGSCESDDDP-------LHHQPRAGCGASRGKFQRIISVLDSEDAGPSV 113

Query: 469 ILAFLTEL 492
            LA LTEL
Sbjct: 114 QLASLTEL 121


>gb|PKA51906.1| E3 ubiquitin-protein ligase UPL4 [Apostasia shenzhenica]
          Length = 1543

 Score = 75.9 bits (185), Expect = 7e-13
 Identities = 53/129 (41%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSSS-------------ARPEPATATVLMECXXXXXXXXX 300
           MDRGRKRPE +D  PADKRACSSS             A P  + +TV             
Sbjct: 1   MDRGRKRPEVADQLPADKRACSSSEFRPVPICTSASAAAPSSSASTVPPPSSSEPADCEM 60

Query: 301 XXXXXPNG-----YGSCDSDSDPDPAEYHHDHHNPAHSGASRSKFQQIIAGLGGDEAGPS 465
                  G     YGSCDSD D       H        G SR KFQ+II+ + GD+AGPS
Sbjct: 61  ESSSSGRGGGDSAYGSCDSDDD-------HHFQPRGGCGTSRVKFQRIISCVEGDDAGPS 113

Query: 466 AILAFLTEL 492
           + +A LTEL
Sbjct: 114 SQVAALTEL 122


>ref|XP_008805036.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Phoenix
           dactylifera]
          Length = 1547

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 52/128 (40%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
 Frame = +1

Query: 160 MDRGRKRPETSDPPPADKRACSSS----------ARPEPATATVL-------MECXXXXX 288
           MDRGRKR E SD  PADKRACS S            PEPA A  +       ++C     
Sbjct: 1   MDRGRKRAEASDKLPADKRACSLSEFWSGSSSLPPTPEPAAAAAVASSSSEPVDCDMESS 60

Query: 289 XXXXXXXXXPNGYGSCDSDSDPDPAEYHHDHHNPAHSGASRSKFQQIIAGLGGDEAGPSA 468
                     + YGSCDSD +     +  D  +P+  GAS+ KFQ+I A L  D+AGP  
Sbjct: 61  SSGRSDRAGDSEYGSCDSDDERGYGRWVFD--DPSLCGASKGKFQKIFASL-EDDAGPGV 117

Query: 469 ILAFLTEL 492
            LA L EL
Sbjct: 118 QLAALAEL 125


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