BLASTX nr result

ID: Ophiopogon26_contig00031618 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031618
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020248352.1| putative F-box protein At5g42430 [Asparagus ...    72   2e-11
gb|ONK70725.1| uncharacterized protein A4U43_C04F870 [Asparagus ...    55   8e-07
ref|XP_020259789.1| putative F-box/LRR-repeat/kelch-repeat prote...    55   9e-06

>ref|XP_020248352.1| putative F-box protein At5g42430 [Asparagus officinalis]
          Length = 361

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
 Frame = -1

Query: 532 EYVLKHRNAFEAVVGGRFG--GCLVPNG----IAFHSDLDILFLIQQRELLAYHLISGNV 371
           +YVLKHRN    +     G    L+ +     ++FHSDLD++FL  Q +L +YHL S  +
Sbjct: 269 KYVLKHRNNIRNLAAELLGVGHQLLSDDRFRILSFHSDLDVIFLKLQGKLFSYHLKSAKL 328

Query: 370 EVICNLRGGGPVFPYSPCFSEDLEL 296
           E +C+  G  P F YSPCFSEDL+L
Sbjct: 329 EEMCSFEGNRPCFAYSPCFSEDLDL 353


>gb|ONK70725.1| uncharacterized protein A4U43_C04F870 [Asparagus officinalis]
          Length = 112

 Score = 55.5 bits (132), Expect = 8e-07
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
 Frame = -1

Query: 529 YVLKHRNAFEAVVGGRFGGCLVPNGIAFHSDLDILFL----------IQQRELLAYHLIS 380
           YVL+ R +   ++G      ++ +  AFH DLDI+FL          I    L +YH  S
Sbjct: 25  YVLRFRKSMGEIMGKLSCSMVLVDIPAFHPDLDIIFLQLQYKGCSNEIMPEILFSYHWGS 84

Query: 379 GNVEVICNLRGGGPVFPYSPCFSEDLEL 296
           G +E IC  +   P+F Y+PC+++DL+L
Sbjct: 85  GKLEEICIRKNVEPMFAYAPCYNDDLKL 112


>ref|XP_020259789.1| putative F-box/LRR-repeat/kelch-repeat protein At1g11620 isoform X1
           [Asparagus officinalis]
          Length = 363

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
 Frame = -1

Query: 529 YVLKHRNAFEAVVGGRFGGCLVPNGIAFHSDLDILFL----------IQQRELLAYHLIS 380
           YVL+ R +   ++G      ++ +  AFH DLDI+FL          I    L +YH  S
Sbjct: 276 YVLRFRKSMGEIMGKLSCSMVLVDIPAFHPDLDIIFLQLQYKGCSNEIMPEILFSYHWGS 335

Query: 379 GNVEVICNLRGGGPVFPYSPCFSEDLEL 296
           G +E IC  +   P+F Y+PC+++DL+L
Sbjct: 336 GKLEEICIRKNVEPMFAYAPCYNDDLKL 363


Top