BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031208
         (415 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020251901.1| pentatricopeptide repeat-containing protein ...   139   2e-35
ref|XP_010924851.1| PREDICTED: pentatricopeptide repeat-containi...    63   8e-09
ref|XP_011037976.1| PREDICTED: pentatricopeptide repeat-containi...    58   4e-07
ref|XP_021663697.1| pentatricopeptide repeat-containing protein ...    56   2e-06
ref|XP_009410841.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
gb|PNT03939.1| hypothetical protein POPTR_014G097000v3 [Populus ...    54   1e-05

>ref|XP_020251901.1| pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Asparagus officinalis]
 gb|ONK81530.1| uncharacterized protein A4U43_C01F30210 [Asparagus officinalis]
          Length = 931

 Score =  139 bits (350), Expect = 2e-35
 Identities = 80/139 (57%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
 Frame = -1

Query: 355 MEQTISKSQSRPSSLHRSLSQTRKRERNYPIVQSLQTT---------------------S 239
           MEQTIS SQ+ PSS H+S S+TRK++R    VQ LQTT                     S
Sbjct: 1   MEQTISNSQNIPSSTHKSFSKTRKKKRYQFKVQCLQTTDPLTENPVSAQSLLQTPSSSAS 60

Query: 238 FKYLHSSKQIHAHIIKSGEKWISESVTCNLIQLCLESGETQSAAMLFSAGLDTGSLSLSQ 59
            +   SSKQIHA IIKSG KW+S S+TCNLIQLCLE+G+TQSAAMLFSAGLD+GSLSLS 
Sbjct: 61  LQSHDSSKQIHAQIIKSGGKWMSCSLTCNLIQLCLETGDTQSAAMLFSAGLDSGSLSLSY 120

Query: 58  LTRAFDEGRGNSSDLLKVF 2
           LT AFD+GR +  + L++F
Sbjct: 121 LTDAFDKGRVDPYEFLRIF 139


>ref|XP_010924851.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Elaeis guineensis]
          Length = 935

 Score = 63.2 bits (152), Expect = 8e-09
 Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 26/144 (18%)
 Frame = -1

Query: 355 MEQTISKSQSRPSSLHRSLSQTRKRERNYPIVQSLQTTSF-------------------- 236
           MEQTIS  +  PSS  +S   +R+R R  P  Q+LQ                        
Sbjct: 1   MEQTISLPRFIPSSPIKSSHNSRER-RTVPTFQALQIPEITIEAPPSSTLLSLPSLPSLL 59

Query: 235 ------KYLHSSKQIHAHIIKSGEKWISESVTCNLIQLCLESGETQSAAMLFSAGLDTGS 74
                 K L S KQIHA I+++ E+W S+S    LIQ+     + +SAA +FS  L  G+
Sbjct: 60  HDPLYSKSLDSVKQIHAQILRTTEEWKSDSTMDRLIQMYSCFKDFRSAAAVFSVALQCGA 119

Query: 73  LSLSQLTRAFDEGRGNSSDLLKVF 2
           L  S L   F  G  + S+LL++F
Sbjct: 120 LQWSYLINTFGGGGRDPSELLEIF 143


>ref|XP_011037976.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Populus euphratica]
          Length = 942

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 QTRKRERNYPIVQSLQ--TTSFKYLHSSKQIHAHIIKSGEKWISESVTCNLIQLCLESGE 122
           +T  R  + P + SL   T   K L S K +HA +IK G KW S+S+  +LI   LE G+
Sbjct: 52  ETTLRPTHVPNLGSLNGFTADSKTLDSVKAMHAQMIKKGNKWNSDSMAKHLITFYLELGD 111

Query: 121 TQSAAMLFSAGLDTGSLSLSQLTRAFDEGRGNSSDLLKVF 2
            +SAA++F  GL    +  +     F    G+ S++L+VF
Sbjct: 112 CKSAAVVFFVGLARNYVMWNNFLEEFKSFGGDPSEVLEVF 151


>ref|XP_021663697.1| pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial isoform X1 [Hevea brasiliensis]
 ref|XP_021663765.1| pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial isoform X2 [Hevea brasiliensis]
          Length = 942

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = -1

Query: 346 TISKSQSRPSSLHRSLSQTRKR--ERNYPIVQSLQTTS-FKYLHSSKQIHAHIIKSGEKW 176
           T+S + +  SS   SLS +     ++++P ++ L T S  K L S K +HA +IK+   W
Sbjct: 33  TLSLASTSTSSETTSLSASLAPPWQKHFPNLRFLDTPSDVKTLDSVKAMHAQMIKTCNMW 92

Query: 175 ISESVTCNLIQLCLESGETQSAAMLFSAGLDTGSLSLSQLTRAFDEGRGNSSDLLKVF 2
           +S+S+   LI   LE G+ +SAAM+F  G     +  +     F+   G+   +L+VF
Sbjct: 93  VSDSMAITLITFYLELGDFRSAAMVFFVGFARNYVMWNSFLEEFETYGGHPIQILQVF 150


>ref|XP_009410841.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial [Musa acuminata subsp. malaccensis]
          Length = 939

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 28/146 (19%)
 Frame = -1

Query: 355 MEQTISKSQSRPSSLHRSLSQTRKRER--NYPIVQSLQTTSFKYLHSS------------ 218
           MEQT+S    RPSS  +  +  RKR R  + P+ Q+L   S   + +S            
Sbjct: 1   MEQTLSSRSFRPSSPCKRSADLRKRWRRTSSPVPQALLQPSPAAVETSPAVLTFPSPSLA 60

Query: 217 -------------KQIHAHIIKSGEKWISESVTCNLIQLCLESGETQSAAMLFSAGLDTG 77
                        KQ+HA I+K+ E   S+S    LIQ+  + G+ +SAA +F   L + 
Sbjct: 61  LDDPIYSTSLVSVKQVHARIVKAAEPRSSKSAMDFLIQVYSKFGDFRSAAAVFFIALQSD 120

Query: 76  SLSLSQLTRAFD-EGRGNSSDLLKVF 2
           +LS S L  +FD  G  ++ +LL++F
Sbjct: 121 TLSWSYLIDSFDGAGERSTRELLEIF 146


>gb|PNT03939.1| hypothetical protein POPTR_014G097000v3 [Populus trichocarpa]
          Length = 930

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 QTRKRERNYPIVQSLQ--TTSFKYLHSSKQIHAHIIKSGEKWISESVTCNLIQLCLESGE 122
           +T  R  + P + SL   T     L S K +HA +IK G KW S+S+  +LI   LE G+
Sbjct: 41  ETTPRPTHVPNLGSLNGFTADSNTLDSVKAMHAQMIKKGNKWNSDSMAKHLITSYLELGD 100

Query: 121 TQSAAMLFSAGLDTGSLSLSQLTRAFDEGRGNSSDLLKVF 2
            +SAA++F  G     +  +     F    G+ S++L+VF
Sbjct: 101 CKSAAVVFFVGFARNYVMWNNFLEEFKSFGGDPSEVLEVF 140