BLASTX nr result

ID: Ophiopogon26_contig00031166 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031166
         (604 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021472926.1| mucin-2-like [Oncorhynchus mykiss]                 57   5e-06

>ref|XP_021472926.1| mucin-2-like [Oncorhynchus mykiss]
          Length = 2583

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 57/192 (29%), Positives = 78/192 (40%)
 Frame = +2

Query: 20   TATPMPVEVSIDTPPTNCSMKCLREDPLLSNPLSPILYDPQILNFSSCWSQTKPSTLLSS 199
            T  P+P   SI T P   S     ED   + PL     DP  +  S     T  +TL++S
Sbjct: 1947 TTEPLP---SITTAPATTS-----EDLPTTEPLPTTTEDPTTITDSPT---TTTATLMTS 1995

Query: 200  TVPAPSQSNTAVIITIPSVAAPSTMPDTSIANCHASARKVFDKSXXXXXXXXXXXXXXTP 379
            T  A + ++TAV  TI  V  PST  DT+     A+  K    S              T 
Sbjct: 1996 T--AAAMTSTAVATTITDVPTPSTAADTTTTTATATTPKTLPSSTTADDTTKTTIATATT 2053

Query: 380  QSLSPVSSTQSLTLVASQPTLTVAVSATKFETAPPAEDKDEPPTTNPLVQSTMLTGAGST 559
               SP ++T + T   S PT T +   T   TA P     E  T+    ++T  T A +T
Sbjct: 2054 PKTSPTTTTAAPTTNTSAPTTTTSAPTT--TTASPITSTAEASTST--AEATKTTIAPTT 2109

Query: 560  PMTVSATESLNP 595
              + S T +  P
Sbjct: 2110 TTSSSLTTTAAP 2121


Top