BLASTX nr result

ID: Ophiopogon26_contig00031073 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00031073
         (493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020253187.1| R3H and coiled-coil domain-containing protei...    85   6e-19
ref|XP_009379826.1| PREDICTED: R3H and coiled-coil domain-contai...    68   2e-13
ref|XP_010931059.1| PREDICTED: coiled-coil domain-containing pro...    70   8e-13
ref|XP_008799714.1| PREDICTED: coiled-coil domain-containing pro...    65   9e-12
gb|PKA47016.1| hypothetical protein AXF42_Ash011690 [Apostasia s...    55   1e-08
ref|XP_020107433.1| coiled-coil domain-containing protein R3HCC1...    56   1e-08
ref|XP_020107434.1| coiled-coil domain-containing protein R3HCC1...    56   1e-08
gb|OAY84668.1| Coiled-coil domain-containing protein R3HCC1L [An...    55   2e-08
ref|XP_021313423.1| uncharacterized protein LOC110434076 [Sorghu...    48   3e-06

>ref|XP_020253187.1| R3H and coiled-coil domain-containing protein 1 [Asparagus
           officinalis]
 gb|ONK77500.1| uncharacterized protein A4U43_C02F7220 [Asparagus officinalis]
          Length = 353

 Score = 85.1 bits (209), Expect(2) = 6e-19
 Identities = 53/93 (56%), Positives = 56/93 (60%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSVEPL 394
           R RAV P  +  RD         P REDEEI  SE SNDRQEE DDWEAI D  V+   L
Sbjct: 84  RARAVAPSGVGSRD---------PKREDEEIGASESSNDRQEEVDDWEAIADDGVTGGLL 134

Query: 395 VSCQQTAETSSPSQVDPSPKGTLKR*GRGLFLY 493
            S Q   ETSSP +VDPSPK   KR GRG FLY
Sbjct: 135 PSRQ--GETSSPPRVDPSPKEAPKRRGRGSFLY 165



 Score = 36.6 bits (83), Expect(2) = 6e-19
 Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +3

Query: 48  LRLLESIVYNHXXXXXXXXXXXXXXDLRLATALGDL---ESYRGFSIKADE 191
           + LLES++ N               DLRLA+ALGDL    S RGFSIKADE
Sbjct: 29  ISLLESVISN----LETLGSSSSSGDLRLASALGDLADLHSSRGFSIKADE 75


>ref|XP_009379826.1| PREDICTED: R3H and coiled-coil domain-containing protein 1 [Musa
           acuminata subsp. malaccensis]
          Length = 372

 Score = 68.2 bits (165), Expect(2) = 2e-13
 Identities = 45/94 (47%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSVEPL 394
           R R   PP L P    S  V+E  S + EEIRVS PS+D +E++DDWEAI D  +  E L
Sbjct: 89  RARGSVPP-LTPTSGGSEPVREKISPQ-EEIRVSTPSSDHEEDEDDWEAIADRGIHDESL 146

Query: 395 VSCQQ-TAETSSPSQVDPSPKGTLKR*GRGLFLY 493
           +S      E SS S+ DP    T KR GRG FLY
Sbjct: 147 LSSNAGDGEASSSSRKDPEVLVTPKRRGRGSFLY 180



 Score = 34.7 bits (78), Expect(2) = 2e-13
 Identities = 19/26 (73%), Positives = 20/26 (76%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALGDL---ESYRGFSIKADE 191
           DLRLA ALGDL    S RGFS+KADE
Sbjct: 55  DLRLAAALGDLADLHSSRGFSLKADE 80


>ref|XP_010931059.1| PREDICTED: coiled-coil domain-containing protein R3HCC1L [Elaeis
           guineensis]
          Length = 354

 Score = 70.5 bits (171), Expect(2) = 8e-13
 Identities = 45/87 (51%), Positives = 52/87 (59%)
 Frame = +2

Query: 233 PPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSVEPLVSCQQT 412
           PP L   DS+  K KE P    EEIR S PSN++  + DDWEAI D   S E L+S +  
Sbjct: 84  PPRLG--DSKPAKEKEPPK---EEIRASGPSNNQDGDGDDWEAIADRGASEEVLLSLRNE 138

Query: 413 AETSSPSQVDPSPKGTLKR*GRGLFLY 493
           A  SSPS+ DP P  T KR GRG FLY
Sbjct: 139 A-ASSPSRDDPEPLVTPKRKGRGSFLY 164



 Score = 30.4 bits (67), Expect(2) = 8e-13
 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALG---DLESYRGFSIKADE 191
           DLRLA+AL    DL S R FS+KADE
Sbjct: 48  DLRLASALSVLADLHSSRSFSLKADE 73


>ref|XP_008799714.1| PREDICTED: coiled-coil domain-containing protein R3HCC1L [Phoenix
           dactylifera]
          Length = 352

 Score = 64.7 bits (156), Expect(2) = 9e-12
 Identities = 40/79 (50%), Positives = 48/79 (60%)
 Frame = +2

Query: 257 SESLKVKETPSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSVEPLVSCQQTAETSSPSQ 436
           S+  K KE P    EEIR S PSND+  + DDWEAI D A S E L+S +    ++S S+
Sbjct: 88  SKPAKEKEPPK---EEIRESGPSNDQDGDQDDWEAIADRATSDEVLLSLRNETASNS-SR 143

Query: 437 VDPSPKGTLKR*GRGLFLY 493
            DP P  T KR GRG FLY
Sbjct: 144 DDPEPLVTPKRRGRGSFLY 162



 Score = 32.7 bits (73), Expect(2) = 9e-12
 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALG---DLESYRGFSIKADE 191
           DLRLA+AL    DL S RGFS+KADE
Sbjct: 46  DLRLASALSVLADLHSSRGFSLKADE 71


>gb|PKA47016.1| hypothetical protein AXF42_Ash011690 [Apostasia shenzhenica]
          Length = 379

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 38/94 (40%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSV-EP 391
           R+R+  PP  +PR   S  V ET S + EE   +  SN  QE++DDWEA+ D A S  E 
Sbjct: 85  RSRSFHPPESEPRQVRS--VWET-SEQKEENGTASSSNKCQEDEDDWEALADLAASSGEV 141

Query: 392 LVSCQQTAETSSPSQVDPSPKGTLKR*GRGLFLY 493
           L S  Q       +    +P G  +R GRG FLY
Sbjct: 142 LFSAGQEEAAGLDTSWMVAPSGAPRRRGRGSFLY 175



 Score = 32.0 bits (71), Expect(2) = 1e-08
 Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
 Frame = +3

Query: 126 LRLATALGDL---ESYRGFSIKADE 191
           LRLATAL DL    S RGFS+KADE
Sbjct: 52  LRLATALSDLAGLHSSRGFSLKADE 76


>ref|XP_020107433.1| coiled-coil domain-containing protein R3HCC1L isoform X1 [Ananas
           comosus]
          Length = 378

 Score = 55.8 bits (133), Expect(2) = 1e-08
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEED----DDWEAIVDCAVS 382
           R RA   P+     S+  + K+TP++ED  +RVSE +   QEE+    DDWEAIVD    
Sbjct: 94  RARADRTPSPNLGGSDPAEEKKTPAKED--VRVSEETKKNQEEEQDDEDDWEAIVDRGAI 151

Query: 383 VEPLVSCQQTAETSSPSQVDPSPKGTLKR*GRGLFLY 493
            + L      A + S    +P    T KR GRG FLY
Sbjct: 152 EDSLKLETDAASSKSTVVEEPVVSATPKRRGRGSFLY 188



 Score = 30.8 bits (68), Expect(2) = 1e-08
 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALGDL---ESYRGFSIKADE 191
           DL LA ALGDL    + RGFS+KADE
Sbjct: 60  DLGLAAALGDLAELHASRGFSLKADE 85


>ref|XP_020107434.1| coiled-coil domain-containing protein R3HCC1L isoform X2 [Ananas
           comosus]
          Length = 348

 Score = 55.8 bits (133), Expect(2) = 1e-08
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEED----DDWEAIVDCAVS 382
           R RA   P+     S+  + K+TP++ED  +RVSE +   QEE+    DDWEAIVD    
Sbjct: 94  RARADRTPSPNLGGSDPAEEKKTPAKED--VRVSEETKKNQEEEQDDEDDWEAIVDRGAI 151

Query: 383 VEPLVSCQQTAETSSPSQVDPSPKGTLKR*GRGLFLY 493
            + L      A + S    +P    T KR GRG FLY
Sbjct: 152 EDSLKLETDAASSKSTVVEEPVVSATPKRRGRGSFLY 188



 Score = 30.8 bits (68), Expect(2) = 1e-08
 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALGDL---ESYRGFSIKADE 191
           DL LA ALGDL    + RGFS+KADE
Sbjct: 60  DLGLAAALGDLAELHASRGFSLKADE 85


>gb|OAY84668.1| Coiled-coil domain-containing protein R3HCC1L [Ananas comosus]
          Length = 377

 Score = 55.1 bits (131), Expect(2) = 2e-08
 Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
 Frame = +2

Query: 215 RTRAVDPPALKPRDSESLKVKETPSREDEEIRVSEPSNDRQEED----DDWEAIVDCAVS 382
           R RA   P      S+  + K+TP++ED  +RVSE +   QEE+    DDWEAIVD    
Sbjct: 93  RARADRTPPPNLGGSDPAEEKKTPAKED--VRVSEETKKNQEEEQDDEDDWEAIVDRGAI 150

Query: 383 VEPLVSCQQTAETSSPSQVDPSPKGTLKR*GRGLFLY 493
            + L      A + S    +P    T KR GRG FLY
Sbjct: 151 EDSLKLETDAASSKSTVVEEPVVSATPKRRGRGSFLY 187



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
 Frame = +3

Query: 123 DLRLATALGDL---ESYRGFSIKADE 191
           DL LA ALGDL    + RGFS+KADE
Sbjct: 59  DLGLAAALGDLAELHASRGFSLKADE 84


>ref|XP_021313423.1| uncharacterized protein LOC110434076 [Sorghum bicolor]
 gb|KXG34199.1| hypothetical protein SORBI_3003G439800 [Sorghum bicolor]
          Length = 366

 Score = 47.8 bits (112), Expect(2) = 3e-06
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
 Frame = +2

Query: 215 RTRAVDPPALKPRD-SESLKVKET-PSREDEEIRVSEPSNDRQEEDDDWEAIVDCAVSVE 388
           R+RA  P AL  ++ SE    +E+    +D E   +    + ++E+DDWE+I DC    +
Sbjct: 79  RSRAAAPGALGDKEPSEKCSSQESLMGLKDSEGSANTDDKNNEDEEDDWESIADCGALDD 138

Query: 389 PLV-SCQQTAETSSPSQVDPS--PKGTLKR*GRGLFLY 493
            L  S +Q A   S S  + S  P    KR GRG FLY
Sbjct: 139 TLARSLEQEARVPSCSSSERSGTPSSGPKRRGRGSFLY 176



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 48  LRLLESIVYNHXXXXXXXXXXXXXXDLRLATALGD---LESYRGFSIKADE 191
           + LLES+V N               DLRLATALGD   L + RG +++ADE
Sbjct: 23  IALLESVVSN---LSTSAAAAPPAADLRLATALGDLAGLHASRGNTLRADE 70


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