BLASTX nr result

ID: Ophiopogon26_contig00030986 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030986
         (355 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK77375.1| uncharacterized protein A4U43_C02F5870 [Asparagus...    60   6e-08
ref|XP_020253770.1| zinc finger CCCH domain-containing protein 1...    60   7e-08

>gb|ONK77375.1| uncharacterized protein A4U43_C02F5870 [Asparagus officinalis]
          Length = 700

 Score = 59.7 bits (143), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -3

Query: 353 WETAQNDSVREETDGHVVEGRSRSHSEASKSYEKLKHYREKRKRELNNSDSDEMYDRRAR 174
           WET    S REET+     G S SH + SKS  KLKH R+KR+   N+S SDE  DR+ R
Sbjct: 619 WETRGEASGREETEESSYNGSSSSHRKPSKSGGKLKHCRKKRRHVDNSSGSDEELDRKPR 678

Query: 173 NKFSRKQAST 144
            K S  Q ++
Sbjct: 679 KKHSHGQRTS 688


>ref|XP_020253770.1| zinc finger CCCH domain-containing protein 16 [Asparagus
           officinalis]
          Length = 725

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 33/70 (47%), Positives = 41/70 (58%)
 Frame = -3

Query: 353 WETAQNDSVREETDGHVVEGRSRSHSEASKSYEKLKHYREKRKRELNNSDSDEMYDRRAR 174
           WET    S REET+     G S SH + SKS  KLKH R+KR+   N+S SDE  DR+ R
Sbjct: 644 WETRGEASGREETEESSYNGSSSSHRKPSKSGGKLKHCRKKRRHVDNSSGSDEELDRKPR 703

Query: 173 NKFSRKQAST 144
            K S  Q ++
Sbjct: 704 KKHSHGQRTS 713


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