BLASTX nr result

ID: Ophiopogon26_contig00030970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030970
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]           81   2e-15
ref|XP_008392199.1| PREDICTED: uncharacterized protein LOC103454...    72   1e-13
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    74   8e-13
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                  73   1e-12
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    72   3e-12
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    72   3e-12
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...    70   1e-11
emb|CAN76611.1| hypothetical protein VITISV_040103 [Vitis vinifera]    70   2e-11
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...    70   2e-11
gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subc...    70   2e-11
emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]    69   3e-11
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]             69   3e-11
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    69   3e-11
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    69   4e-11
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    69   4e-11
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      69   4e-11
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    69   5e-11
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      69   6e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    68   8e-11
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    68   8e-11

>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGV 180
           +KL+ KSKKC+F+G++ GVKGFKLW+P +K   +SRDVVFDE  +L+Q   TE      V
Sbjct: 584 SKLDPKSKKCIFVGYSKGVKGFKLWDPVSKKMVLSRDVVFDEQFMLKQSRETE------V 637

Query: 181 PEVSGGSRSVQEVEVE-----EGSKSPAEQSTEEPT 273
            E +GGS   + ++VE       + S   Q   EPT
Sbjct: 638 TESAGGSSGKEVIQVELEPTPNKNTSAVHQQPPEPT 673


>ref|XP_008392199.1| PREDICTED: uncharacterized protein LOC103454381 [Malus domestica]
          Length = 132

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTE-DKAQGG 177
           +KL+ ++KK +F+GFN+GVKG++LW P+ K   +SRD+ FDE S+L+  S T  D  Q  
Sbjct: 44  SKLDPRAKKAIFVGFNNGVKGYRLWCPDLKKLVISRDMTFDETSMLQSNSKTSIDTTQ-- 101

Query: 178 VPEVSGGSRSVQEVEVEE-GSKSPAEQSTEEPTSE 279
           VP      RS QEVE E+  + +P    TE+  +E
Sbjct: 102 VP-----MRSFQEVEFEKIATNTPLHVLTEQEVNE 131


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1175

 Score = 73.9 bits (180), Expect = 8e-13
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
 Frame = +1

Query: 4   KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
           KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR VVF+E S++   S   D   GG  
Sbjct: 562 KLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVVFNE-SVMFNDSLPTDVIPGGFD 620

Query: 184 EVSGGSRSVQEVEVE--EGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRK-------P 336
           E     +    V+VE  +  K+    +    T +H    V+ P+++PIA R+       P
Sbjct: 621 E----EQQYVSVQVEHVDDQKTEIVGNDVNDTVQH-SPPVLQPQDEPIAHRRTKRSCGAP 675

Query: 337 VRQVKQID 360
           VR +++ D
Sbjct: 676 VRLIEECD 683


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
 Frame = +1

Query: 4   KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
           KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR VVF+E  +      T+    G   
Sbjct: 586 KLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRSVVFNESVMFNDSLPTDVIPGGSDE 645

Query: 184 EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRK-------PVR 342
           E    S  V+ V+ +E   +    +    T +H    V+ P+++PIA R+       PVR
Sbjct: 646 EQQYVSVQVEHVDDQE---TEIVGNDVNDTVQH-SPPVLQPQDEPIAHRRTKRSCGAPVR 701

Query: 343 QVKQID 360
            +++ D
Sbjct: 702 LIEECD 707


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR VVF+E  +      T+    G   
Sbjct: 667  KLEPRAIKCLFLGYGLGVKGYKLWNPETNKTFMSRSVVFNESVMFNDSLPTDVIPGGSDE 726

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRK-------PVR 342
            E    S  V+ V+ +E   +    +    T +H    V+ P+++PIA R+       PVR
Sbjct: 727  EQQYVSVQVEHVDDQE---TEIVGNDVNDTVQH-SPPVLQPQDEPIAHRRTKRSCGAPVR 782

Query: 343  QVKQID 360
             +++ D
Sbjct: 783  LIEECD 788


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
            Group]
 gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1322

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR+V+F+E  +      T+    G   
Sbjct: 667  KLEPRAIKCLFLGYGSGVKGYKLWNPETNKTFMSRNVIFNEFVMFNDSLPTDVIPGGSDE 726

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRK-------PVR 342
            E    S  V+ V+ +E   +    +    T +H    V+ P+++PIA R+       PVR
Sbjct: 727  EQQYVSVQVEHVDDQE---TEIVGNDVNDTVQH-SPSVLQPQDEPIAHRRTKRSCGAPVR 782

Query: 343  QVKQID 360
             +++ D
Sbjct: 783  LIEECD 788


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
 Frame = +1

Query: 4   KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
           KLE ++ KC+F+G+  GVKG+KLWNP+T   FMSR VVF+E  +      T+    G   
Sbjct: 607 KLEPRAIKCLFLGYGSGVKGYKLWNPKTNKTFMSRSVVFNESVMFNDSLPTDVILGGSDE 666

Query: 184 EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRK-------PVR 342
           E    S  V+ V+ +E   +    +    T +H    V+ P+++PIA R+       P+R
Sbjct: 667 EQQYVSVQVEHVDDQE---TEIVGNDVNVTVQH-SPPVLQPQDEPIAHRRTKRSCGAPIR 722

Query: 343 QVKQID 360
            +++ D
Sbjct: 723 FIEECD 728


>emb|CAN76611.1| hypothetical protein VITISV_040103 [Vitis vinifera]
          Length = 473

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 41/121 (33%), Positives = 64/121 (52%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGV 180
           +KL++KS++C+F+G+  GVKGFKLW+P+     +SRDVVFDE  +L+       K +   
Sbjct: 68  SKLDAKSRQCIFLGYQKGVKGFKLWDPKANKVVISRDVVFDEKPMLQ----CTQKGEKQE 123

Query: 181 PEVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRKPVRQVKQID 360
           PE    +  + +VE+E       E           EDQ    +   IA+ +P R +K + 
Sbjct: 124 PESCSSNEKLIQVELE---THDIEDHAWNAGKSSSEDQ----QHHNIAMDRPRRTIKPLI 176

Query: 361 R 363
           R
Sbjct: 177 R 177


>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1032

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGV 180
           +KL+ ++KK +F+G   GVKG++LW  ETK   +SRDV FDE ++L  G  T ++ + G 
Sbjct: 447 SKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFDESTML--GKVTTEQKKNGT 504

Query: 181 PEVSGGSRSVQEVEVEEGSKSPA--EQSTEEPTSEHGEDQVVIPEE----QPIALRKPVR 342
           P         ++VE E     PA  E+ T     E  E++V I E     + IALRKP R
Sbjct: 505 P---------KQVEFERKIVFPANDEEKTPMVDEESDEEEVHIQEPPQQLESIALRKPKR 555


>gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 966

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 42/113 (37%), Positives = 62/113 (54%)
 Frame = +1

Query: 4   KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
           KLE ++ KC+F+G+  GVKG+KLWNPETK   M + VVF+E  +  +  ST+    G   
Sbjct: 506 KLEHRAIKCLFLGYGLGVKGYKLWNPETKRIVMCKSVVFNESVMFNESLSTDVIPGGSDE 565

Query: 184 EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQVVIPEEQPIALRKPVR 342
           E    S  V+ V+ +E        +    T +H    V+ P++QPIA R+  R
Sbjct: 566 EQQYVSVQVEHVDDQE---IEIVDNDVHDTVKH-SSPVLQPQDQPIAHRRTKR 614


>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
          Length = 605

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 28/55 (50%), Positives = 44/55 (80%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDK 165
           +KL+ KS++C+F+G+  GVKGFK+W+P+     +SRDVVFDE ++L+  SS+ED+
Sbjct: 174 SKLDEKSRQCIFLGYQKGVKGFKIWDPKANKVVISRDVVFDEKTMLQWKSSSEDQ 228


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    VP
Sbjct: 674  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML------HDKPSTNVP 727

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQ----STEEPTSEHGEDQVVIPE-EQPIALRKPVRQV 348
              S    SVQ   +     +P ++    + +EP  E     +V    ++ IA  +P R +
Sbjct: 728  VESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNI 787

Query: 349  KQIDR 363
            K   R
Sbjct: 788  KPPQR 792


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    VP
Sbjct: 881  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML------HDKPSTNVP 934

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQ----STEEPTSEHGEDQVVIPE-EQPIALRKPVRQV 348
              S    SVQ   +     +P ++    + +EP  E     +V    ++ IA  +P R +
Sbjct: 935  VESQEKASVQVEHLISSGHAPEKEDVAINQDEPVIEDSNSSIVQQSPKRSIAKDRPKRNI 994

Query: 349  KQIDR 363
            K   R
Sbjct: 995  KPPQR 999


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
 gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
 Frame = +1

Query: 1   NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGV 180
           +KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    V
Sbjct: 634 SKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML------HDKPSTNV 687

Query: 181 PEVSGGSRSVQEVEVEEGSKSPAEQST----EEPTSEHGEDQVVIPE-EQPIALRKPVRQ 345
           P  S    SVQ   +     +P +++     + P  E  +  +V    +  IA  KP R 
Sbjct: 688 PVESQEKASVQVEHLISSGHAPEKENVAINLDAPVIEDSDSSIVQQSPKHSIAKDKPKRN 747

Query: 346 VK 351
           +K
Sbjct: 748 IK 749


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1262

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
 Frame = +1

Query: 1    NKLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGV 180
            +KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    V
Sbjct: 671  SKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVML------HDKPSTNV 724

Query: 181  PEVSGGSRSVQEVEVEEGSKSPAEQST----EEPTSEHGEDQVVIPE-EQPIALRKPVRQ 345
            P  S    SVQ   +     +P +++     + P  E  +  +V    +  IA  KP R 
Sbjct: 725  PVESQEKASVQVEHLISSGHAPEKENVAINLDAPVIEDSDSSIVQQSPKHSIAKDKPKRN 784

Query: 346  VK 351
            +K
Sbjct: 785  IK 786


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    VP
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVIL------HDKPSTNVP 762

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQST----EEPTSEHGEDQVV-IPEEQPIALRKPVRQV 348
              S    SVQ   +     +P +++     + P  E  +  +V    ++ IA  KP R +
Sbjct: 763  VESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNI 822

Query: 349  K 351
            K
Sbjct: 823  K 823


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    VP
Sbjct: 709  KLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVIL------HDKPSTNVP 762

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQST----EEPTSEHGEDQVV-IPEEQPIALRKPVRQV 348
              S    SVQ   +     +P +++     + P  E  +  +V    ++ IA  KP R +
Sbjct: 763  VESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNI 822

Query: 349  K 351
            K
Sbjct: 823  K 823


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 68.6 bits (166), Expect = 6e-11
 Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
 Frame = +1

Query: 4   KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
           KLE ++ KC+F+G+  GVKG+KLW PETK   +SR+VVF E  +L       DK    VP
Sbjct: 646 KLEPRAIKCIFLGYASGVKGYKLWCPETKKVVISRNVVFHESVIL------HDKPSTNVP 699

Query: 184 EVSGGSRSVQEVEVEEGSKSPAEQ----STEEPTSEHGEDQVVIPE-EQPIALRKPVRQV 348
             S    SVQ   +     +P ++    + + P  E  +  +V    ++ IA  KP R +
Sbjct: 700 VESQEKASVQVEHLISSGHAPEKEDVAINQDAPVIEDSDSSIVHQSPKRSIAKDKPKRNI 759

Query: 349 K 351
           K
Sbjct: 760 K 760


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 68.2 bits (165), Expect = 8e-11
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR VVF+E  +      +E   +    
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPE---K 722

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQ-----------VVIPEEQPIALR 330
            E+      V+ V+ + G +       ++  ++  +D            + + EE PIA R
Sbjct: 723  ELQRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQR 782

Query: 331  KPVRQVK 351
            K  R  K
Sbjct: 783  KSKRTTK 789


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score = 68.2 bits (165), Expect = 8e-11
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
 Frame = +1

Query: 4    KLESKSKKCVFIGFNHGVKGFKLWNPETKGAFMSRDVVFDEDSLLRQGSSTEDKAQGGVP 183
            KLE ++ KC+F+G+  GVKG+KLWNPET   FMSR VVF+E  +      +E   +    
Sbjct: 666  KLEPRAVKCLFLGYGSGVKGYKLWNPETGKTFMSRSVVFNESVMFTNSLPSEHVPE---K 722

Query: 184  EVSGGSRSVQEVEVEEGSKSPAEQSTEEPTSEHGEDQ-----------VVIPEEQPIALR 330
            E+      V+ V+ + G +       ++  ++  +D            + + EE PIA R
Sbjct: 723  ELQRMHMQVEHVDDDTGVQVEPVHEQDDHNNDVADDDAHDDVQQTPPILQLEEELPIAQR 782

Query: 331  KPVRQVK 351
            K  R  K
Sbjct: 783  KSKRTTK 789


Top