BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030884
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009393925.1| PREDICTED: DNA-directed RNA polymerases II, ...   130   1e-36
ref|XP_008799520.1| PREDICTED: DNA-directed RNA polymerases II, ...   128   1e-35
ref|XP_022879045.1| DNA-directed RNA polymerases II, IV and V su...   125   2e-34
gb|PAN46291.1| hypothetical protein PAHAL_I02655 [Panicum hallii]     124   5e-34
ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, ...   124   5e-34
ref|XP_004982505.1| DNA-directed RNA polymerases II, IV and V su...   124   5e-34
gb|OVA08144.1| RNA polymerase [Macleaya cordata]                      124   5e-34
gb|OEL28247.1| DNA-directed RNA polymerases II, IV and V subunit...   124   5e-34
ref|XP_020093252.1| DNA-directed RNA polymerases II, IV and V su...   122   4e-33
ref|XP_019231837.1| PREDICTED: DNA-directed RNA polymerases II a...   121   4e-33
ref|XP_010919240.1| PREDICTED: DNA-directed RNA polymerases II, ...   122   4e-33
ref|XP_009616963.1| PREDICTED: DNA-directed RNA polymerases II a...   120   4e-33
ref|XP_022891055.1| DNA-directed RNA polymerases II, IV and V su...   122   4e-33
gb|KQK88194.1| hypothetical protein SETIT_037339mg [Setaria ital...   124   5e-33
ref|XP_009616957.1| PREDICTED: DNA-directed RNA polymerases II a...   120   5e-33
ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II a...   121   5e-33
ref|XP_022891056.1| DNA-directed RNA polymerases II, IV and V su...   122   7e-33
gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indi...   121   8e-33
ref|XP_009616952.1| PREDICTED: DNA-directed RNA polymerases II a...   120   8e-33
ref|XP_020594735.1| DNA-directed RNA polymerases II, IV and V su...   119   9e-33

>ref|XP_009393925.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Musa acuminata subsp. malaccensis]
          Length = 143

 Score =  130 bits (328), Expect = 1e-36
 Identities = 66/74 (89%), Positives = 69/74 (93%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EGVEED +NNNED+PDD+VG EGEEK QE  ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGVEEDQENNNEDMPDDVVGAEGEEKEQERVERPRKTSKYMTKYERARILGTRALQISMN 83

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 84  APVMVELEGETDPL 97


>ref|XP_008799520.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Phoenix dactylifera]
          Length = 144

 Score =  128 bits (321), Expect = 1e-35
 Identities = 64/74 (86%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG E + +NNNEDVPDD+VG EGEEK Q+P ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 25  EGTEVEPENNNEDVPDDVVGAEGEEKEQQPVERPRKTSKYMTKYERARILGTRALQISMN 84

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 85  APVMVELEGETDPL 98


>ref|XP_022879045.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Olea
           europaea var. sylvestris]
          Length = 143

 Score =  125 bits (313), Expect = 2e-34
 Identities = 65/75 (86%), Positives = 69/75 (92%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVE-EDLDNNNEDVPDDIVGEGEEKAQE-PSERPRKTSKYMTKYERARILGTRALQISM 313
           EGVE E+ +NNNED PDDI+GEGEEK +E P ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGVEVEEENNNNEDAPDDILGEGEEKQEEVPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>gb|PAN46291.1| hypothetical protein PAHAL_I02655 [Panicum hallii]
          Length = 143

 Score =  124 bits (311), Expect = 5e-34
 Identities = 62/74 (83%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIV-GEGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+L+NNNED PDD+V  EGEEK QE ++R RKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGAEEELENNNEDTPDDVVDAEGEEKEQEKAKRERKTSKYMTKYERARILGTRALQISMN 83

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 84  APVMVELEGETDPL 97


>ref|XP_006650303.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Oryza brachyantha]
          Length = 143

 Score =  124 bits (311), Expect = 5e-34
 Identities = 60/74 (81%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+L+NNNED PDD++G E E+K Q+ ++RPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGAEEELENNNEDAPDDVLGAEAEDKEQDKTQRPRKTSKYMTKYERARILGTRALQISMN 83

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 84  APVMVELEGETDPL 97


>ref|XP_004982505.1| DNA-directed RNA polymerases II, IV and V subunit 6A [Setaria
           italica]
          Length = 143

 Score =  124 bits (311), Expect = 5e-34
 Identities = 62/74 (83%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+L+NNNED PDD+VG EGEEK QE ++  RKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGAEEELENNNEDTPDDVVGAEGEEKEQEKAKSERKTSKYMTKYERARILGTRALQISMN 83

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 84  APVMVELEGETDPL 97


>gb|OVA08144.1| RNA polymerase [Macleaya cordata]
          Length = 132

 Score =  124 bits (310), Expect = 5e-34
 Identities = 63/74 (85%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EED++NNNED  D +V EGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 35  EGAEEDVENNNEDAADPLVVEGEEKEEQEPVERPRKTSKYMTKYERARILGTRALQISMN 94

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 95  APVMVELEGETDPL 108


>gb|OEL28247.1| DNA-directed RNA polymerases II, IV and V subunit 6A, partial
           [Dichanthelium oligosanthes]
          Length = 135

 Score =  124 bits (310), Expect = 5e-34
 Identities = 62/74 (83%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+L+NNNED PDD+VG EGEEK QE ++  RKTSKYMTKYERARILGTRALQISMN
Sbjct: 16  EGAEEELENNNEDAPDDVVGAEGEEKEQEKAKGDRKTSKYMTKYERARILGTRALQISMN 75

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 76  APVMVELEGETDPL 89


>ref|XP_020093252.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Ananas
           comosus]
 gb|OAY78893.1| DNA-directed RNA polymerases II, IV and V subunit 6A [Ananas
           comosus]
          Length = 142

 Score =  122 bits (305), Expect = 4e-33
 Identities = 63/74 (85%), Positives = 68/74 (91%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+ +NN ED+PDD+VG E EEK QEP+ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGAEEEPENN-EDLPDDVVGAETEEKEQEPAERPRKTSKYMTKYERARILGTRALQISMN 82

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 83  APVMVELEGETDPL 96


>ref|XP_019231837.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X2 [Nicotiana attenuata]
          Length = 131

 Score =  121 bits (304), Expect = 4e-33
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVEEDLDN-NNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISM 313
           EG E + DN NNED+PD ++GEGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>ref|XP_010919240.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A
           [Elaeis guineensis]
          Length = 144

 Score =  122 bits (305), Expect = 4e-33
 Identities = 62/74 (83%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+ +NNN+DVPDD+VG E EEK Q   ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 25  EGGEEERENNNDDVPDDVVGAEAEEKEQVSVERPRKTSKYMTKYERARILGTRALQISMN 84

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 85  APVMVELEGETDPL 98


>ref|XP_009616963.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X4 [Nicotiana tomentosiformis]
 ref|XP_016445054.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X4 [Nicotiana tabacum]
          Length = 99

 Score =  120 bits (301), Expect = 4e-33
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVEEDLDN-NNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISM 313
           EG E + DN NNE+VPD ++GEGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGAEVEEDNVNNEEVPDPLLGEGEEKPEQEPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>ref|XP_022891055.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Olea
           europaea var. sylvestris]
          Length = 161

 Score =  122 bits (306), Expect = 4e-33
 Identities = 64/74 (86%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVGEGEEKAQ-EPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EGVE + + NNED PDDIVGEGEEK + EP ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 23  EGVELE-EENNEDAPDDIVGEGEEKQEDEPVERPRKTSKYMTKYERARILGTRALQISMN 81

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 82  APVMVELEGETDPL 95


>gb|KQK88194.1| hypothetical protein SETIT_037339mg [Setaria italica]
          Length = 230

 Score =  124 bits (311), Expect = 5e-33
 Identities = 62/74 (83%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+L+NNNED PDD+VG EGEEK QE ++  RKTSKYMTKYERARILGTRALQISMN
Sbjct: 111 EGAEEELENNNEDTPDDVVGAEGEEKEQEKAKSERKTSKYMTKYERARILGTRALQISMN 170

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 171 APVMVELEGETDPL 184


>ref|XP_009616957.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X3 [Nicotiana tomentosiformis]
 ref|XP_016445046.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X3 [Nicotiana tabacum]
          Length = 106

 Score =  120 bits (301), Expect = 5e-33
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVEEDLDN-NNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISM 313
           EG E + DN NNE+VPD ++GEGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGAEVEEDNVNNEEVPDPLLGEGEEKPEQEPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>ref|XP_009620211.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tomentosiformis]
 ref|XP_009763347.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana sylvestris]
 ref|XP_016471800.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tabacum]
 ref|XP_016490328.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           [Nicotiana tabacum]
 ref|XP_019231836.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X1 [Nicotiana attenuata]
 gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
 gb|AAD34614.1|AF153278_1 DNA-directed RNA polymerase IIb [Nicotiana tabacum]
 gb|OIT28448.1| dna-directed rna polymerases ii, iv and v subunit 6a [Nicotiana
           attenuata]
          Length = 143

 Score =  121 bits (304), Expect = 5e-33
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVEEDLDN-NNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISM 313
           EG E + DN NNED+PD ++GEGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGAEIEEDNGNNEDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>ref|XP_022891056.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like [Olea
           europaea var. sylvestris]
          Length = 175

 Score =  122 bits (306), Expect = 7e-33
 Identities = 64/74 (86%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVGEGEEKAQ-EPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EGVE + + NNED PDDIVGEGEEK + EP ERPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 23  EGVELE-EENNEDAPDDIVGEGEEKQEVEPVERPRKTSKYMTKYERARILGTRALQISMN 81

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 82  APVMVELEGETDPL 95


>gb|EAY90802.1| hypothetical protein OsI_12404 [Oryza sativa Indica Group]
          Length = 143

 Score =  121 bits (303), Expect = 8e-33
 Identities = 60/74 (81%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG EE+ +NNNED PD++VG E E+K QE ++RPRKTSKYMTKYERARILGTRALQISMN
Sbjct: 24  EGAEEEPENNNEDGPDEVVGAEAEDKEQEKTQRPRKTSKYMTKYERARILGTRALQISMN 83

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 84  APVMVELEGETDPL 97


>ref|XP_009616952.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X2 [Nicotiana tomentosiformis]
 ref|XP_016445040.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 6B-like
           isoform X2 [Nicotiana tabacum]
          Length = 122

 Score =  120 bits (301), Expect = 8e-33
 Identities = 63/75 (84%), Positives = 67/75 (89%), Gaps = 2/75 (2%)
 Frame = +2

Query: 140 EGVEEDLDN-NNEDVPDDIVGEGEEKA-QEPSERPRKTSKYMTKYERARILGTRALQISM 313
           EG E + DN NNE+VPD ++GEGEEK  QEP ERPRKTSKYMTKYERARILGTRALQISM
Sbjct: 23  EGAEVEEDNVNNEEVPDPLLGEGEEKPEQEPVERPRKTSKYMTKYERARILGTRALQISM 82

Query: 314 NAPVMVELEGETDPL 358
           NAPVMVELEGETDPL
Sbjct: 83  NAPVMVELEGETDPL 97


>ref|XP_020594735.1| DNA-directed RNA polymerases II, IV and V subunit 6A-like, partial
           [Phalaenopsis equestris]
          Length = 89

 Score =  119 bits (298), Expect = 9e-33
 Identities = 63/74 (85%), Positives = 66/74 (89%), Gaps = 1/74 (1%)
 Frame = +2

Query: 140 EGVEEDLDNNNEDVPDDIVG-EGEEKAQEPSERPRKTSKYMTKYERARILGTRALQISMN 316
           EG E + DNN +DVPDDIVG E EEK QEP E+PRKTSKYMTKYERARILGTRALQISMN
Sbjct: 12  EGAEVEEDNN-DDVPDDIVGVENEEKDQEPVEKPRKTSKYMTKYERARILGTRALQISMN 70

Query: 317 APVMVELEGETDPL 358
           APVMVELEGETDPL
Sbjct: 71  APVMVELEGETDPL 84