BLASTX nr result

ID: Ophiopogon26_contig00030706 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030706
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...    88   1e-18
gb|AFK48586.1| unknown [Medicago truncatula]                           57   1e-08
ref|NP_054927.1| hypothetical protein SpolCp017 (plastid) [Spina...    55   3e-07
emb|CAA25830.1| hypothetical protein, partial (chloroplast) [Pis...    52   5e-06
pir||T06501 hypothetical protein 59 - garden pea chloroplast           52   5e-06
ref|XP_021842836.1| uncharacterized protein LOC110782893 [Spinac...    46   8e-06

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
 gb|AES99735.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 48/88 (54%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 203 FCRTNWLYYTHG-AVIFWAELDLNQRRHVANEFTVRPH*PLGHRPRKNSL*AY**SMINF 379
           F  T W+   HG +V FWAELDLNQRRH+ANEFT                          
Sbjct: 5   FKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT-------------------------- 38

Query: 380 LL*YPTPRGSRIPVASLKERCPKPLDDG 463
              YPTPRGSRIPVASLKERCPKPLDDG
Sbjct: 39  ---YPTPRGSRIPVASLKERCPKPLDDG 63


>gb|AFK48586.1| unknown [Medicago truncatula]
          Length = 29

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -1

Query: 328 MPERLMGTDCKFVGDMSTLVQIQLGPK 248
           MPERLMGTDCKFVG+MSTLVQIQLGPK
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPK 27


>ref|NP_054927.1| hypothetical protein SpolCp017 (plastid) [Spinacia oleracea]
 emb|CAB88720.1| hypothetical protein (chloroplast) [Spinacia oleracea]
          Length = 83

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -1

Query: 328 MPERLMGTDCKFVGDMSTLVQIQLGP 251
           MPERLMGTDCKFVG+MSTLVQIQLGP
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGP 26


>emb|CAA25830.1| hypothetical protein, partial (chloroplast) [Pisum sativum]
          Length = 62

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +2

Query: 248 FWAELDLNQRRHVANEFTVRPH 313
           FWAELDLNQRRH+ANEFTVRPH
Sbjct: 41  FWAELDLNQRRHIANEFTVRPH 62


>pir||T06501 hypothetical protein 59 - garden pea chloroplast
          Length = 62

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +2

Query: 248 FWAELDLNQRRHVANEFTVRPH 313
           FWAELDLNQRRH+ANEFTVRPH
Sbjct: 41  FWAELDLNQRRHIANEFTVRPH 62


>ref|XP_021842836.1| uncharacterized protein LOC110782893 [Spinacia oleracea]
          Length = 59

 Score = 45.8 bits (107), Expect(3) = 8e-06
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -3

Query: 461 HRLVV*DISLSRRQRGFDFPWG 396
           HRL V DISLSRRQRGFDFPWG
Sbjct: 10  HRLAVQDISLSRRQRGFDFPWG 31



 Score = 27.3 bits (59), Expect(3) = 8e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -2

Query: 348 NEFFLGRCPSG 316
           N FFLGRCPSG
Sbjct: 49  NRFFLGRCPSG 59



 Score = 23.5 bits (49), Expect(3) = 8e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 403 PGGRVLQKEVD 371
           P GRVLQKEVD
Sbjct: 29  PWGRVLQKEVD 39


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