BLASTX nr result

ID: Ophiopogon26_contig00030643 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030643
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013743228.1| sorting nexin 2B-like [Brassica napus]             58   4e-07
ref|XP_013611585.1| PREDICTED: sorting nexin 2B [Brassica olerac...    58   4e-07

>ref|XP_013743228.1| sorting nexin 2B-like [Brassica napus]
          Length = 539

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = -3

Query: 290 DPLSPNDETMETLTLTDPLSSSAPSAATNGGXXXXXXXXXXXSFIDPPSYADVIFTPFNG 111
           DPLSP+  T+ T   +DPLS++ P +  NGG            +I+PPSYADVIF+PF+ 
Sbjct: 33  DPLSPHPITVATPADSDPLSAT-PQSKPNGGDSRS--------YIEPPSYADVIFSPFDD 83

Query: 110 GE----SNDVTXXXXXXXXXXXXXXXXNFLKITVSDPQKE 3
                 S+D                  +++KITVS PQKE
Sbjct: 84  NSEINGSDDTHSSDYSLSRSPSSSASSDYIKITVSSPQKE 123


>ref|XP_013611585.1| PREDICTED: sorting nexin 2B [Brassica oleracea var. oleracea]
          Length = 541

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
 Frame = -3

Query: 290 DPLSPNDETMETLTLTDPLSSSAPSAATNGGXXXXXXXXXXXSFIDPPSYADVIFTPFNG 111
           DPLSP+  T+ T   +DPLS++ P +  NGG            +I+PPSYADVIF+PF+ 
Sbjct: 33  DPLSPHPITVATPADSDPLSAT-PQSKPNGGDSRS--------YIEPPSYADVIFSPFDD 83

Query: 110 GE----SNDVTXXXXXXXXXXXXXXXXNFLKITVSDPQKE 3
                 S+D                  +++KITVS PQKE
Sbjct: 84  NSEINGSDDTHSSDYSLSRSPSSSASSDYIKITVSSPQKE 123


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