BLASTX nr result
ID: Ophiopogon26_contig00030509
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00030509
(398 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944... 82 1e-22
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 92 3e-22
emb|CDP17738.1| unnamed protein product [Coffea canephora] 86 2e-21
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 89 2e-21
emb|CDP17739.1| unnamed protein product [Coffea canephora] 84 2e-21
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 72 9e-21
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 72 9e-21
dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cepha... 86 2e-20
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 77 6e-19
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 75 1e-18
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 75 1e-18
dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cepha... 77 1e-18
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 77 3e-18
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 77 4e-18
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 74 4e-18
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 73 4e-18
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 73 4e-18
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 73 4e-18
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 73 4e-18
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 73 4e-18
>ref|XP_018625891.1| PREDICTED: uncharacterized protein LOC108944919, partial [Nicotiana
tomentosiformis]
Length = 148
Score = 82.0 bits (201), Expect(2) = 1e-22
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G TC L F EHC GK+ RV+FGT +H G LD V+ D+WG SK SLGG +F
Sbjct: 67 GLLKGVKTCNLEFCEHCVKGKQIRVKFGTAIHNTKGILDYVYSDIWGSSKIPSLGGKHYF 126
Query: 32 VFFVDDCSR 6
V FVD+ R
Sbjct: 127 VTFVDNFFR 135
Score = 52.4 bits (124), Expect(2) = 1e-22
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRGVSTTSVTPD-ETDSTRLWHLKMDHTSIGSLHA 224
+ GALVVMK +R +++ Y RGS V G +T + + D E ++TRLWH+++ H SL A
Sbjct: 3 ICSGALVVMKANRKNNNMYRYRGSTVIGTATVTSSDDKEVEATRLWHMRLGHAGGKSLKA 62
Query: 223 LSSQ 212
LS+Q
Sbjct: 63 LSNQ 66
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 92.0 bits (227), Expect(2) = 3e-22
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+ GT C+L F EHC +GK+ RV+FGT +H G LD VH DVWGP+K S+GG
Sbjct: 377 KQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRH 436
Query: 38 WFVFFVDDCSR 6
+FV FVDD SR
Sbjct: 437 YFVTFVDDFSR 447
Score = 40.8 bits (94), Expect(2) = 3e-22
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 394 TKGALVVMKIDRDSSSYFPRGSAVRGV--STTSVTPDETDSTRLWHLKMDHTSIGSLHAL 221
T GALV++K ++ Y+ +GS V G + TS + + ++ +LWH+++ H SL L
Sbjct: 316 TLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHAGEKSLQIL 375
Query: 220 SSQ 212
+ Q
Sbjct: 376 TKQ 378
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 86.3 bits (212), Expect(2) = 2e-21
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+ GT C+L F EHC + K+ +V+FGT +H G LD VH DVWGP+K SLGG
Sbjct: 463 KQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRY 522
Query: 38 WFVFFVDDCSR 6
+FV F+DD SR
Sbjct: 523 YFVTFIDDFSR 533
Score = 43.9 bits (102), Expect(2) = 2e-21
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRG---VSTTSVTPDETDSTRLWHLKMDHTSIGSLH 227
VT GAL+++K R ++ Y+ +GS V G V+T+S + + ++T+LWH+++ SL
Sbjct: 400 VTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQ 459
Query: 226 ALSSQ 212
L+ Q
Sbjct: 460 NLAKQ 464
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1032
Score = 89.0 bits (219), Expect(2) = 2e-21
Identities = 41/78 (52%), Positives = 51/78 (65%)
Frame = -1
Query: 239 RIIACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKH 60
R + ++ GL+ C+L F EHC GKK RV+FGT +H G LD VH DVWGPSK
Sbjct: 219 RSLNLLMKQGLLKNIQACKLDFCEHCVKGKKTRVKFGTAIHDTKGILDYVHSDVWGPSKT 278
Query: 59 ASLGGSRWFVFFVDDCSR 6
ASL G+ ++V FVDD SR
Sbjct: 279 ASLAGNHYYVTFVDDFSR 296
Score = 40.8 bits (94), Expect(2) = 2e-21
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMK-IDRDSSSYFPRGSAVRGVSTTSVTPD-ETDSTRLWHLKMDHTSIGSLHA 224
+ GALVVMK + +++ Y+ +G+ + G + + + + E +S +LWH+++ H SL+
Sbjct: 164 IISGALVVMKGVRKNNRLYYYQGTTIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNL 223
Query: 223 LSSQ 212
L Q
Sbjct: 224 LMKQ 227
>emb|CDP17739.1| unnamed protein product [Coffea canephora]
Length = 435
Score = 84.3 bits (207), Expect(2) = 2e-21
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+ GT C+L F EHC + K+ +V+FGT +H G LD VH +VWGP+K SLGG
Sbjct: 71 KQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSNVWGPAKTPSLGGRY 130
Query: 38 WFVFFVDDCSR 6
+FV F+DD SR
Sbjct: 131 YFVTFIDDFSR 141
Score = 45.4 bits (106), Expect(2) = 2e-21
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVS---TTSVTPDETDSTRLWHLKMDHTSIGSLH 227
VT GALV++K R + Y+ +GS V G + T+S + + ++T+LWH+++ H SL
Sbjct: 8 VTSGALVMLKGVRKNILYYYQGSIVVGTAAATTSSSSKKDAEATKLWHMRLGHAGEKSLQ 67
Query: 226 ALSSQ 212
L+ Q
Sbjct: 68 NLAKQ 72
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1032
Score = 72.4 bits (176), Expect(2) = 9e-21
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+ +L F EHC GK+ RV F T HR G LD +H D+WGPSK S GG R
Sbjct: 142 KQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCR 201
Query: 38 WFVFFVDDCSR 6
+ + +DD SR
Sbjct: 202 YMMTIIDDFSR 212
Score = 55.5 bits (132), Expect(2) = 9e-21
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVSTTSVTPDETDSTRLWHLKMDHTSIGSLHALS 218
V+KGA+V++K +R S Y +GS V G + S + + D+T+LWH+++ H S +H LS
Sbjct: 82 VSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLS 141
Query: 217 SQ 212
Q
Sbjct: 142 KQ 143
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 72.4 bits (176), Expect(2) = 9e-21
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+ +L F EHC GK+ RV F T HR G LD +H D+WGPSK S GG R
Sbjct: 438 KQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKVPSYGGCR 497
Query: 38 WFVFFVDDCSR 6
+ + +DD SR
Sbjct: 498 YMMTIIDDFSR 508
Score = 55.5 bits (132), Expect(2) = 9e-21
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVSTTSVTPDETDSTRLWHLKMDHTSIGSLHALS 218
V+KGA+V++K +R S Y +GS V G + S + + D+T+LWH+++ H S +H LS
Sbjct: 378 VSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLS 437
Query: 217 SQ 212
Q
Sbjct: 438 KQ 439
>dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 177
Score = 85.5 bits (210), Expect(2) = 2e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+AG + +L F+EHC GK+ RV+F TV+H+ G LD +H D+WGPS SLGGSR+
Sbjct: 107 GLLAGVKSGKLDFYEHCVYGKQCRVKFSTVIHKTKGILDYIHSDLWGPSSQVSLGGSRYL 166
Query: 32 VFFVDDCSR 6
+ +DD SR
Sbjct: 167 MALIDDYSR 175
Score = 41.2 bits (95), Expect(2) = 2e-20
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVST--TSVTPDETDSTRLWHLKMDHTSIGSLHA 224
V +GALV+MK ++ Y G+ + G + +S + D+TRLWH+++ H S L
Sbjct: 43 VLRGALVIMKGEKIDGLYQLYGNTILGTAAVASSSGDKDADTTRLWHMRLGHMSERGLQI 102
Query: 223 LS 218
LS
Sbjct: 103 LS 104
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 77.4 bits (189), Expect(2) = 6e-19
Identities = 35/76 (46%), Positives = 48/76 (63%)
Frame = -1
Query: 233 IACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHAS 54
+A ++ L+ G ++F EHC GK RV+F T VHR G LD VH D+WGPS+ S
Sbjct: 441 MAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPS 500
Query: 53 LGGSRWFVFFVDDCSR 6
LGG+R+ + +DD SR
Sbjct: 501 LGGARYMLTIIDDYSR 516
Score = 44.3 bits (103), Expect(2) = 6e-19
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTS 242
V+KG+LV M D +S++ Y RGS + G V+ +VT DE T LWH+++ H S
Sbjct: 384 VSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPSKTNLWHMRLGHMS 437
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 75.1 bits (183), Expect(2) = 1e-18
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = -1
Query: 239 RIIACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKH 60
R ++ + GL++G T +L F EHC GK+ RV+F T +H+ G +D H D+WGPS
Sbjct: 932 RGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPT 991
Query: 59 ASLGGSRWFVFFVDDCSR 6
S GG R+ + F+DD SR
Sbjct: 992 ISKGGYRYLLTFIDDYSR 1009
Score = 45.8 bits (107), Expect(2) = 1e-18
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVSTTSVTPD-ETDSTRLWHLKMDHTSIGSLHAL 221
V GAL V++ + + YF GS+V GV+ S + D ++D+T+LWH+++ H S L L
Sbjct: 878 VFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVL 937
Query: 220 SSQ 212
S +
Sbjct: 938 SKR 940
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 75.1 bits (183), Expect(2) = 1e-18
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = -1
Query: 239 RIIACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKH 60
R ++ + GL++G T +L F EHC GK+ RV+F T +H+ G +D H D+WGPS
Sbjct: 953 RGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPT 1012
Query: 59 ASLGGSRWFVFFVDDCSR 6
S GG R+ + F+DD SR
Sbjct: 1013 ISKGGYRYLLTFIDDYSR 1030
Score = 45.8 bits (107), Expect(2) = 1e-18
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVSTTSVTPD-ETDSTRLWHLKMDHTSIGSLHAL 221
V GAL V++ + + YF GS+V GV+ S + D ++D+T+LWH+++ H S L L
Sbjct: 899 VFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSERGLSVL 958
Query: 220 SSQ 212
S +
Sbjct: 959 SKR 961
>dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 176
Score = 76.6 bits (187), Expect(2) = 1e-18
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -1
Query: 218 ESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSR 39
+ GL+AG + +L F EHC GK+ RV+F T +H+ G LD +H D+WGPS SLGGSR
Sbjct: 105 KKGLLAGVKSGKLDFCEHCVYGKQCRVKFSTAIHKSKG-LDYIHSDLWGPSSQLSLGGSR 163
Query: 38 WFVFFVDDCSR 6
+ + +DD SR
Sbjct: 164 YLMTLMDDYSR 174
Score = 44.3 bits (103), Expect(2) = 1e-18
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSSYFPRGSAVRGVST--TSVTPDETDSTRLWHLKMDHTSIGSLHA 224
V +GALV+MK + Y +G+AV G +T +S + D+TR WH+++ H S L
Sbjct: 43 VLRGALVIMKGKKIDGLYQLQGNAVLGTATVASSSRDKDADTTRFWHIRLGHMSERGLQI 102
Query: 223 LSSQ 212
LS +
Sbjct: 103 LSKK 106
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 77.4 bits (189), Expect(2) = 3e-18
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = -1
Query: 224 FVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLG 48
F + GL+ GT C+L F EHC +GK+ RV+FGT +H G LD VH DVWGP+K S+G
Sbjct: 376 FTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPAKTPSIG 434
Score = 42.0 bits (97), Expect(2) = 3e-18
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 394 TKGALVVMKIDRDSSSYFPRGSAVRGV--STTSVTPDETDSTRLWHLKMDHTSIGSLHAL 221
T GALV++K ++ Y+ +GS V G + TS + + ++T+LWH+++ H SL
Sbjct: 317 TSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHAGEKSLQIF 376
Query: 220 SSQ 212
+ Q
Sbjct: 377 TKQ 379
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gb|ABF96427.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1326
Score = 77.4 bits (189), Expect(2) = 4e-18
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = -1
Query: 233 IACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHAS 54
+A ++ L+ G +++F EHC GK RV+F T VHR G LD VH D+WGPS+ A
Sbjct: 441 MAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGILDYVHTDLWGPSRKAY 500
Query: 53 LGGSRWFVFFVDDCSR 6
LGG+R+ + +DD SR
Sbjct: 501 LGGARYMLTIIDDYSR 516
Score = 41.6 bits (96), Expect(2) = 4e-18
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTS 242
V+KG+LV M D +S++ Y RGS + G V+ +V+ DE T LWH+++ H S
Sbjct: 384 VSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVSKDEPIKTNLWHMRLGHMS 437
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 74.3 bits (181), Expect(2) = 4e-18
Identities = 34/76 (44%), Positives = 47/76 (61%)
Frame = -1
Query: 233 IACFVESGLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHAS 54
+A ++ L+ G ++F E C GK RV+F T VHR G LD VH D+WGPS+ S
Sbjct: 441 MAELMKRNLLDGCTQGNMKFCERCVFGKHKRVKFNTSVHRTKGILDYVHADLWGPSRKPS 500
Query: 53 LGGSRWFVFFVDDCSR 6
LGG+R+ + +DD SR
Sbjct: 501 LGGARYMLTIIDDYSR 516
Score = 44.7 bits (104), Expect(2) = 4e-18
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTS 242
V+KG+LV M D +S++ Y RGS + G V+ +VT DE + T LWH+++ H S
Sbjct: 384 VSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMS 437
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 73.2 bits (178), Expect(2) = 4e-18
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G +L+F EHC GK RV+F T H G LD VH D+WGP++ S GG+R+
Sbjct: 470 GLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYM 529
Query: 32 VFFVDDCSR 6
+ VDD SR
Sbjct: 530 MTIVDDYSR 538
Score = 45.8 bits (107), Expect(2) = 4e-18
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTSIGSLHA 224
VTKG+LVVMK D S++ Y RG+ + G V+ S + +D+T LWH+++ H S L
Sbjct: 406 VTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAE 465
Query: 223 LSSQ 212
LS +
Sbjct: 466 LSKR 469
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 73.2 bits (178), Expect(2) = 4e-18
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G +L+F EHC GK RV+F T H G LD VH D+WGP++ S GG+R+
Sbjct: 416 GLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYM 475
Query: 32 VFFVDDCSR 6
+ VDD SR
Sbjct: 476 MTIVDDYSR 484
Score = 45.8 bits (107), Expect(2) = 4e-18
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTSIGSLHA 224
VTKG+LVVMK D S++ Y RG+ + G V+ S + +D+T LWH+++ H S L
Sbjct: 352 VTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAE 411
Query: 223 LSSQ 212
LS +
Sbjct: 412 LSKR 415
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 73.2 bits (178), Expect(2) = 4e-18
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G +L+F EHC GK RV+F T H G LD VH D+WGP++ S GG+R+
Sbjct: 287 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYI 346
Query: 32 VFFVDDCSR 6
+ VDD SR
Sbjct: 347 MTIVDDYSR 355
Score = 45.8 bits (107), Expect(2) = 4e-18
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTSIGSLHA 224
VTKG+LVVMK D S++ Y RG+ + G V+ S + +D+T LWH+++ H S L
Sbjct: 223 VTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAE 282
Query: 223 LSSQ 212
LS +
Sbjct: 283 LSKR 286
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
Length = 944
Score = 73.2 bits (178), Expect(2) = 4e-18
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G +L+F EHC GK RV+F T H G LD VH D+WGP++ S GG+R+
Sbjct: 287 GLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYI 346
Query: 32 VFFVDDCSR 6
+ VDD SR
Sbjct: 347 MTIVDDYSR 355
Score = 45.8 bits (107), Expect(2) = 4e-18
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTSIGSLHA 224
VTKG+LVVMK D S++ Y RG+ + G V+ S + +D+T LWH+++ H S L
Sbjct: 223 VTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAE 282
Query: 223 LSSQ 212
LS +
Sbjct: 283 LSKR 286
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 73.2 bits (178), Expect(2) = 4e-18
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = -1
Query: 212 GLIAGTLTCELRFFEHCYVGKKARVEFGTVVHRPSGFLDLVHVDVWGPSKHASLGGSRWF 33
GL+ G +L+F EHC GK RV+F T H G LD VH D+WGP++ S GG+R+
Sbjct: 421 GLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYI 480
Query: 32 VFFVDDCSR 6
+ VDD SR
Sbjct: 481 MTIVDDYSR 489
Score = 45.8 bits (107), Expect(2) = 4e-18
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = -2
Query: 397 VTKGALVVMKIDRDSSS-YFPRGSAVRG-VSTTSVTPDETDSTRLWHLKMDHTSIGSLHA 224
VTKG+LVVMK D S++ Y RG+ + G V+ S + +D+T LWH+++ H S L
Sbjct: 357 VTKGSLVVMKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAE 416
Query: 223 LSSQ 212
LS +
Sbjct: 417 LSKR 420