BLASTX nr result

ID: Ophiopogon26_contig00030322 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030322
         (1170 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018636297.1| chloride transporter, chloride channel (ClC)...    55   9e-06

>ref|XP_018636297.1| chloride transporter, chloride channel (ClC) family protein
           [Toxoplasma gondii ME49]
 gb|EPT27713.1| chloride transporter, chloride channel (ClC) family protein
           [Toxoplasma gondii ME49]
          Length = 2098

 Score = 55.5 bits (132), Expect(2) = 9e-06
 Identities = 51/172 (29%), Positives = 64/172 (37%)
 Frame = +1

Query: 25  PQDHSPDQNHSPLSSFSLRQLPHPHGRPAEDRSPTRGHPPTQQPPGLQPRRPSALLRWTA 204
           P   SP  +  P SS S      P   P    SP    PP+  PP   P  PS+    + 
Sbjct: 489 PPSSSPPSSSPPSSSTSPSPSSPPSSSPPSP-SPPPSSPPSSSPPSSSPPSPSSPPPSSP 547

Query: 205 PARASPVRSPIRPGRNPPELPRCFXXXXXXXXXXTPQSATTDSNTPRLSSTPTQPRSIAL 384
           P+ +SP  S   P  +PP                 P S++    +P  SST   P S   
Sbjct: 548 PSSSSPSSSSPPPSSSPPSSSP--PSSSSPSSSSPPPSSSPPPPSPPSSSTSPSPSSPPS 605

Query: 385 SGDTRLRPVLSLPSASHVRDSSAPSPQI*PRLRPDPTAAILSSGPRSSHQRS 540
           S      P  S P +S    SS PSP       P P++   SS P SS   S
Sbjct: 606 SSPPSPSPPPSSPPSSSPPSSSPPSP-------PSPSSPPPSSPPSSSSPSS 650



 Score = 23.9 bits (50), Expect(2) = 9e-06
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 659 SHTQPHSASPLSPCSMTDGQPPPSTAAVDPSSPALS 766
           S + P S+SP  P S      PPS++    SSP+ S
Sbjct: 644 SSSSPSSSSP-PPSSSPPPPSPPSSSPPSSSSPSSS 678


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