BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030282
         (614 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008777273.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-45
ref|XP_009383035.1| PREDICTED: pentatricopeptide repeat-containi...   111   6e-25
gb|OAY84117.1| Pentatricopeptide repeat-containing protein [Anan...   107   2e-23
ref|XP_020094925.1| pentatricopeptide repeat-containing protein ...   107   2e-23
ref|XP_011622353.1| pentatricopeptide repeat-containing protein ...    67   9e-18
gb|KVI04183.1| Pentatricopeptide repeat-containing protein [Cyna...    67   1e-16
ref|XP_022722393.1| pentatricopeptide repeat-containing protein ...    60   2e-16
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...    57   7e-16
ref|XP_012084198.1| pentatricopeptide repeat-containing protein ...    59   9e-16
ref|XP_015574769.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-16
gb|EEF43187.1| pentatricopeptide repeat-containing protein, puta...    59   9e-16
ref|XP_010062344.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-15
ref|XP_015937501.1| pentatricopeptide repeat-containing protein ...    59   2e-15
ref|NP_193153.3| Pentatricopeptide repeat (PPR) superfamily prot...    56   2e-15
gb|AAU94392.1| At4g14170 [Arabidopsis thaliana] >gi|55733761|gb|...    56   2e-15
ref|XP_010259704.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-15
ref|XP_009152041.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-15
dbj|GAV58878.1| PPR domain-containing protein/PPR_2 domain-conta...    52   4e-15
gb|OTF88240.1| putative pentatricopeptide repeat (PPR) superfami...    57   5e-15
emb|CDY13648.1| BnaA06g32750D [Brassica napus]                         55   6e-15

>ref|XP_008777273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Phoenix dactylifera]
          Length = 544

 Score =  110 bits (274), Expect(2) = 1e-45
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = -1

Query: 611 SLCTFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLF 432
           S CTFP LVTA KL  SIH+GE FHCLA+KLGF SH+ +PN+L+HMYAS DGL LAR+LF
Sbjct: 119 SRCTFPLLVTAVKLRDSIHEGEAFHCLAIKLGFLSHLPIPNSLLHMYASCDGLTLARQLF 178

Query: 431 DEMPERDRV*Y 399
           DEM ERDR+ Y
Sbjct: 179 DEMLERDRISY 189



 Score =  101 bits (251), Expect(2) = 1e-45
 Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
 Frame = -2

Query: 397 SLDDGWVCAEWGL*DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMI 218
           S+ DG+V     L +AE +F   PDRN +SWSTLF GYVRNR F   +G F  M    + 
Sbjct: 191 SMIDGYV-KSGDLEEAERLFWSTPDRNVVSWSTLFNGYVRNRMFQNAVGFFHQMQEIGVE 249

Query: 217 VASFRCWFV-----YANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVL 53
             S  C  V     YA F+     KS+HG++VR+W  +   VS AL++FY K GLLD+ +
Sbjct: 250 PDS--CSVVSLLSMYALFKSASQGKSVHGFVVRRWLHLLTPVSTALVDFYCKCGLLDAAV 307

Query: 52  NLFVRMHEKDLIGYNTL 2
           +LF R+ +KDLI +N+L
Sbjct: 308 SLFERIPKKDLICWNSL 324


>ref|XP_009383035.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Musa acuminata subsp. malaccensis]
          Length = 550

 Score =  111 bits (278), Expect = 6e-25
 Identities = 69/152 (45%), Positives = 88/152 (57%), Gaps = 13/152 (8%)
 Frame = -1

Query: 611 SLCTFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLF 432
           S CTFP L+T++K ++SIHQGE  HCLALKLGF  H+ +PN+LIHMYAS DGLDLAR+LF
Sbjct: 126 SRCTFPLLITSSKFSESIHQGEILHCLALKLGFLGHLPVPNSLIHMYASCDGLDLARQLF 185

Query: 431 DEMPERDRV*Y--ITR*WMGMC*VGTLRR*RGVFDES**EFNFVVDF--VYW------VC 282
           DEMP++DRV Y  +   ++  C           FDE+      + D+  + W        
Sbjct: 186 DEMPKKDRVSYNSLLDGYVKSC----------DFDEAERLLRIIPDWNVISWSTLFNGFV 235

Query: 281 EEPEVSEGYWAFPDD---GVNMDDCCIVSLLV 195
                S G   F      GV  DDC +VSLLV
Sbjct: 236 RNQMFSRGISFFQQMQKLGVEPDDCSVVSLLV 267



 Score =  108 bits (271), Expect = 5e-24
 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
 Frame = -2

Query: 397 SLDDGWVCAEWGL*DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMI 218
           SL DG+V       +AE +  + PD N ISWSTLF G+VRN+ F +GI  F+ M    + 
Sbjct: 198 SLLDGYV-KSCDFDEAERLLRIIPDWNVISWSTLFNGFVRNQMFSRGISFFQQMQKLGVE 256

Query: 217 ---VASFRCWFVYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNL 47
               +      VY+N++L    KS+HG L+R+W++IP HVS AL+NFY K GLLD+   +
Sbjct: 257 PDDCSVVSLLVVYSNYELAQHGKSVHGLLLRRWRQIPLHVSNALVNFYCKCGLLDAAAKV 316

Query: 46  FVRMHEKDLIGYNTL 2
           F R  EKDLI +NTL
Sbjct: 317 FERTMEKDLISWNTL 331


>gb|OAY84117.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 542

 Score =  107 bits (267), Expect = 2e-23
 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 19/167 (11%)
 Frame = -1

Query: 611 SLCTFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLF 432
           S CTFP LVTAAKL  SI  GE FHC ALKLGF SH+ +PN+LIHMYAS   LDLAR++F
Sbjct: 116 SRCTFPLLVTAAKLCDSIDYGELFHCFALKLGFLSHLPIPNSLIHMYASCGCLDLARQMF 175

Query: 431 DEMPERDRV*YITR*WMGMC*VGTLRR*RGVFDES**EFNFVVDFVYWVCEEPEV----- 267
           DEMPERDRV Y           G ++   G FDE+        + ++W      V     
Sbjct: 176 DEMPERDRVSY------NSLLDGYVK--SGGFDEA--------ERLFWSMPNRSVVSWST 219

Query: 266 -----------SEGYWAF---PDDGVNMDDCCIVSLLVRLCEFSAEI 168
                       +G W F    + GV  DDC I++LL     F   +
Sbjct: 220 LFNGYVRNRMFQKGLWLFHQMQELGVEPDDCSIITLLSVFAHFKLAV 266



 Score =  104 bits (259), Expect = 2e-22
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -2

Query: 397 SLDDGWVCAEWGL*DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMI 218
           SL DG+V    G  +AE +F   P+R+ +SWSTLF GYVRNR F KG+ LF  M    + 
Sbjct: 188 SLLDGYV-KSGGFDEAERLFWSMPNRSVVSWSTLFNGYVRNRMFQKGLWLFHQMQELGVE 246

Query: 217 ---VASFRCWFVYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNL 47
               +      V+A+F+L +  K +HG+L RKW RIP HVS AL++FY K G  D  + +
Sbjct: 247 PDDCSIITLLSVFAHFKLAVHGKMVHGFLHRKWLRIPTHVSSALVDFYCKIGSPDGAVVV 306

Query: 46  FVRMHEKDLIGYNTL 2
           F R  +KDLI +N L
Sbjct: 307 FERAPKKDLISWNAL 321


>ref|XP_020094925.1| pentatricopeptide repeat-containing protein At1g05750,
           chloroplastic-like [Ananas comosus]
          Length = 571

 Score =  107 bits (267), Expect = 2e-23
 Identities = 71/167 (42%), Positives = 87/167 (52%), Gaps = 19/167 (11%)
 Frame = -1

Query: 611 SLCTFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLF 432
           S CTFP LVTAAKL  SI  GE FHC ALKLGF SH+ +PN+LIHMYAS   LDLAR++F
Sbjct: 145 SRCTFPLLVTAAKLCDSIDYGELFHCFALKLGFLSHLPIPNSLIHMYASCGCLDLARQMF 204

Query: 431 DEMPERDRV*YITR*WMGMC*VGTLRR*RGVFDES**EFNFVVDFVYWVCEEPEV----- 267
           DEMPERDRV Y           G ++   G FDE+        + ++W      V     
Sbjct: 205 DEMPERDRVSY------NSLLDGYVK--SGGFDEA--------ERLFWSMPNRSVVSWST 248

Query: 266 -----------SEGYWAF---PDDGVNMDDCCIVSLLVRLCEFSAEI 168
                       +G W F    + GV  DDC I++LL     F   +
Sbjct: 249 LFNGYVRNRMFQKGLWLFHQMQELGVEPDDCSIITLLSVFAHFKLAV 295



 Score =  104 bits (259), Expect = 2e-22
 Identities = 61/135 (45%), Positives = 82/135 (60%), Gaps = 3/135 (2%)
 Frame = -2

Query: 397 SLDDGWVCAEWGL*DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMI 218
           SL DG+V    G  +AE +F   P+R+ +SWSTLF GYVRNR F KG+ LF  M    + 
Sbjct: 217 SLLDGYV-KSGGFDEAERLFWSMPNRSVVSWSTLFNGYVRNRMFQKGLWLFHQMQELGVE 275

Query: 217 ---VASFRCWFVYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNL 47
               +      V+A+F+L +  K +HG+L RKW RIP HVS AL++FY K G  D  + +
Sbjct: 276 PDDCSIITLLSVFAHFKLAVHGKMVHGFLHRKWLRIPTHVSSALVDFYCKIGSPDGAVVV 335

Query: 46  FVRMHEKDLIGYNTL 2
           F R  +KDLI +N L
Sbjct: 336 FERAPKKDLISWNAL 350


>ref|XP_011622353.1| pentatricopeptide repeat-containing protein At5g06540-like
           [Amborella trichopoda]
          Length = 605

 Score = 66.6 bits (161), Expect(3) = 9e-18
 Identities = 34/66 (51%), Positives = 45/66 (68%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ A    Q++ +G T HC ALK GF S++ + NALIHMY+ SD L  AR++FDEM
Sbjct: 103 TFPFVLKACARFQALQEGRTLHCHALKFGFDSYLYVGNALIHMYSFSDCLIGARQMFDEM 162

Query: 422 PERDRV 405
             RD V
Sbjct: 163 ALRDLV 168



 Score = 48.9 bits (115), Expect(3) = 9e-18
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
 Frame = -2

Query: 355 DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCWFVYANFQ 176
           +A  +F +  ++N I+WS +  GYV+  +F +G+ +F   GS    V       V     
Sbjct: 185 EARRLFDLMGEKNLITWSAMISGYVQMGQFKEGLDVF--YGSQACGVKPHESILVSV--- 239

Query: 175 LRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDL 20
           L  C         K +H Y+      +   +  AL++ Y K G L+  L++F  MHEK+L
Sbjct: 240 LAACAHVGGIEQGKWVHAYVKANGMHMSVIMGTALMDMYAKCGCLNLALDVFHSMHEKNL 299

Query: 19  IGYNTL 2
           + + T+
Sbjct: 300 MAWTTM 305



 Score = 22.3 bits (46), Expect(3) = 9e-18
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 414 RSSLVYHSMMDGYVLSGDFETLKGCF 337
           R  + ++SM++GY   GD E  +  F
Sbjct: 165 RDLVSWNSMINGYAKCGDLEEARRLF 190


>gb|KVI04183.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 637

 Score = 66.6 bits (161), Expect(2) = 1e-16
 Identities = 34/70 (48%), Positives = 42/70 (60%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP +V A     SI +G+  H   LK G+ S     N LIHMY S  GLD ARK+FD+M
Sbjct: 177 TFPPVVRACSFGNSIDEGKQVHAQILKFGYHSDGFSQNNLIHMYVSFKGLDEARKVFDKM 236

Query: 422 PERDRV*YIT 393
           P+RD V + T
Sbjct: 237 PQRDVVSWTT 246



 Score = 47.8 bits (112), Expect(2) = 1e-16
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
 Frame = -2

Query: 355 DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCWFVYANFQ 176
           +A  VF M P++N  SW+ +   YV+N +F +   LF  M    + +  F      A   
Sbjct: 259 EAREVFEMMPEKNPASWNAMIAAYVQNDRFREAFSLFDEMRLNRVELDKF-----VAASM 313

Query: 175 LRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDL 20
           L  C         + IH Y+ R    I   +S  +I+ Y K G L+  +  F  +  K +
Sbjct: 314 LSACTGLGAMKQGEWIHDYIKRNEIEIDSKLSTTIIDMYCKCGSLEKAIETFNELPSKGV 373

Query: 19  IGYNTL 2
             +N +
Sbjct: 374 SSWNCM 379


>ref|XP_022722393.1| pentatricopeptide repeat-containing protein At5g66520-like [Durio
           zibethinus]
          Length = 628

 Score = 59.7 bits (143), Expect(2) = 2e-16
 Identities = 28/70 (40%), Positives = 42/70 (60%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP L+ A  ++ ++ +G   H L  KLGF +     N LIHMY +   L+ AR++FD+M
Sbjct: 125 TFPSLIRACSIDNAVEEGTQIHALVFKLGFAADGFCLNNLIHMYVNFRALENARRVFDKM 184

Query: 422 PERDRV*YIT 393
           P R+ V + T
Sbjct: 185 PRRNVVSWTT 194



 Score = 53.9 bits (128), Expect(2) = 2e-16
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = -2

Query: 373 AEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCW 197
           A+ GL D A  +F + PDRNS+SW+ +   YV++ +F +   LF  M +  +++  F   
Sbjct: 200 AQLGLVDGAFEIFELMPDRNSVSWNVMIAAYVQSNRFHEAFALFNRMKAEKVMLDKF--- 256

Query: 196 FVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFV 41
              A   L  C         K IHGY+      +   ++  +I+ Y K G L+     F 
Sbjct: 257 --VAASMLSACTGLGALKQGKWIHGYIQNSGIELDAKLATTIIDMYCKCGCLEKAYETFK 314

Query: 40  RMHEKDLIGYNTL 2
            +  K +  +N +
Sbjct: 315 GLTSKGISSWNCM 327


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
 ref|XP_019075151.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score = 57.4 bits (137), Expect(2) = 7e-16
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           T+P L+ A  ++ +I +G+  H   LK GF +     N LIHMY +   L+ AR++FD M
Sbjct: 122 TYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNM 181

Query: 422 PERDRV 405
           P+RD V
Sbjct: 182 PQRDVV 187



 Score = 54.3 bits (129), Expect(2) = 7e-16
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
 Frame = -2

Query: 418 REIEFSISLDDGWVCAEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFR 242
           R++    SL  G+  ++WG  D A  VF + P+RNS+SW+ +   YV++ +  +   LF 
Sbjct: 184 RDVVSWTSLITGY--SQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFD 241

Query: 241 TMGSTWMIVASFRCWFVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINF 86
            M    +++  F      A   L  C         K IHGY+ +    +   ++  +I+ 
Sbjct: 242 RMRLENVVLDKF-----VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDM 296

Query: 85  YRKSGLLDSVLNLFVRMHEKDLIGYNTL 2
           Y K G L+    +F  + +K +  +N +
Sbjct: 297 YCKCGCLEKASEVFNELPQKGISSWNCM 324


>ref|XP_012084198.1| pentatricopeptide repeat-containing protein At5g66520 [Jatropha
           curcas]
          Length = 634

 Score = 58.5 bits (140), Expect(2) = 9e-16
 Identities = 27/66 (40%), Positives = 41/66 (62%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ AA L+ +I QG   H   LK GF +H+   N LI+MY     ++ AR++FD M
Sbjct: 132 TFPSVIRAACLDNNIKQGNQIHAQVLKFGFGAHVFSLNNLIYMYMKFQAVEEARRIFDRM 191

Query: 422 PERDRV 405
           P+++ V
Sbjct: 192 PDQNFV 197



 Score = 52.8 bits (125), Expect(2) = 9e-16
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
 Frame = -2

Query: 373 AEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCW 197
           ++WG  D A  VF   P+RNS SW+ +   +V+N +F +   LF  +    +++  F   
Sbjct: 207 SQWGFVDEAFEVFQSMPERNSASWNAMMAAFVQNNRFHEAFALFNGIREEVVVLDKF--- 263

Query: 196 FVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFV 41
              A   L  C         K IH Y+      +   ++ ALI+ Y K G L+   ++F 
Sbjct: 264 --VAASMLSACAGLGALEQGKWIHTYIENNGVEMDSKLATALIDMYCKCGSLEKAFDVFN 321

Query: 40  RMHEKDLIGYNTL 2
            +  K++  +N +
Sbjct: 322 SLPHKEISSWNCM 334


>ref|XP_015574769.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Ricinus communis]
          Length = 592

 Score = 58.5 bits (140), Expect(2) = 9e-16
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
 Frame = -2

Query: 373 AEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCW 197
           ++WGL D A  VF   P+RNS SW+ +   YV+  +F +   LF  M +  +++  F   
Sbjct: 165 SQWGLVDEAFRVFQSMPERNSASWNAMIAAYVQGNRFHESFALFDRMRAEGVVLDKF--- 221

Query: 196 FVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFV 41
              A   L  C         K IHGY+ +K       ++ A+I+ Y K G L+  L +F 
Sbjct: 222 --VAATMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKALEVFK 279

Query: 40  RMHEKDLIGYNTL 2
            +  K +  +N +
Sbjct: 280 GLPHKGISSWNCM 292



 Score = 52.8 bits (125), Expect(2) = 9e-16
 Identities = 26/70 (37%), Positives = 40/70 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ A  ++  I  G+  H   LKLGF +H++  N LIHMYA     + AR +   M
Sbjct: 90  TFPSVIRACCIHDDIQLGKQIHAHVLKLGFGAHVISLNNLIHMYARFQAFEEARCVLYSM 149

Query: 422 PERDRV*YIT 393
           PE++ + + T
Sbjct: 150 PEQNFISWTT 159


>gb|EEF43187.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 396

 Score = 58.5 bits (140), Expect(2) = 9e-16
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
 Frame = -2

Query: 373 AEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCW 197
           ++WGL D A  VF   P+RNS SW+ +   YV+  +F +   LF  M +  +++  F   
Sbjct: 221 SQWGLVDEAFRVFQSMPERNSASWNAMIAAYVQGNRFHESFALFDRMRAEGVVLDKF--- 277

Query: 196 FVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFV 41
              A   L  C         K IHGY+ +K       ++ A+I+ Y K G L+  L +F 
Sbjct: 278 --VAATMLSACTGLGALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKALEVFK 335

Query: 40  RMHEKDLIGYNTL 2
            +  K +  +N +
Sbjct: 336 GLPHKGISSWNCM 348



 Score = 52.8 bits (125), Expect(2) = 9e-16
 Identities = 26/70 (37%), Positives = 40/70 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ A  ++  I  G+  H   LKLGF +H++  N LIHMYA     + AR +   M
Sbjct: 146 TFPSVIRACCIHDDIQLGKQIHAHVLKLGFGAHVISLNNLIHMYARFQAFEEARCVLYSM 205

Query: 422 PERDRV*YIT 393
           PE++ + + T
Sbjct: 206 PEQNFISWTT 215


>ref|XP_010062344.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Eucalyptus grandis]
 gb|KCW69472.1| hypothetical protein EUGRSUZ_F02927 [Eucalyptus grandis]
          Length = 532

 Score = 57.8 bits (138), Expect(2) = 1e-15
 Identities = 26/64 (40%), Positives = 39/64 (60%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TF  L+TA      +  G ++HC A++LG+ S+  + N LIH+Y + D LD AR++FD  
Sbjct: 106 TFSFLLTACAQLGDVRSGSSYHCQAIRLGWESYDFVQNGLIHLYVTCDALDSARRIFDAS 165

Query: 422 PERD 411
             RD
Sbjct: 166 ANRD 169



 Score = 53.1 bits (126), Expect(2) = 1e-15
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
 Frame = -2

Query: 352 AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTM--------GSTWMIVASFRCW 197
           A  +F   PD+N++SWS +  GYV+   F + + LF  M            ++ A   C 
Sbjct: 189 ARNLFDEMPDKNAVSWSAMINGYVQAGLFREALELFNAMQTLSGLRPNHAGVVGALTACA 248

Query: 196 FVYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLI 17
           F+ A  Q R     IH Y+ R   ++   +  ALI+ Y K G ++    +F  M E+D+ 
Sbjct: 249 FLGALDQGRW----IHAYVDRTKMKLDRILGTALIDMYSKCGCVEMAHRVFEEMEERDVF 304

Query: 16  GYNTL 2
            + +L
Sbjct: 305 AFTSL 309


>ref|XP_015937501.1| pentatricopeptide repeat-containing protein At5g66520-like [Arachis
           duranensis]
          Length = 614

 Score = 58.9 bits (141), Expect(2) = 2e-15
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP L+ ++ L+ +IH G   H   LK GF S +   NAL HMY S   L  ARK+FD M
Sbjct: 111 TFPSLIKSSSLSATIHHGRQVHAHVLKFGFGSDVYALNALAHMYVSFGLLGDARKVFDRM 170

Query: 422 PERDRV 405
           P R  V
Sbjct: 171 PVRSVV 176



 Score = 51.6 bits (122), Expect(2) = 2e-15
 Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
 Frame = -2

Query: 373 AEWGL*D-AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCW 197
           A+WGL D A  VF + P +NS++W+ +   +V + +F +  GLF  M     +       
Sbjct: 186 AQWGLVDEALAVFELLPQKNSVAWNAVIAAFVGSNRFREAFGLFHRMRKEEEVELD---- 241

Query: 196 FVYANFQLRLCR--------KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFV 41
              A   L  C         + IH Y+VR    +   ++  +I+ Y K G LD    +F 
Sbjct: 242 MYVAATMLSACTGVGALEMGEWIHRYVVRSGIDLDSKLATTIIDMYCKCGCLDKAFKVFG 301

Query: 40  RMHEKDLIGYNTL 2
            +  K L  +N +
Sbjct: 302 GLQLKGLSSWNCM 314


>ref|NP_193153.3| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
           thaliana]
 sp|Q5XEY7.2|PP309_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14170
 gb|AEE83389.1| Pentatricopeptide repeat (PPR) superfamily protein [Arabidopsis
           thaliana]
          Length = 477

 Score = 56.2 bits (134), Expect(2) = 2e-15
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           T P ++ A   ++    G+  H L LKLGF S + + +AL+ MY     L  ARKLFD+M
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195

Query: 422 PERDRV*Y 399
           P RD V Y
Sbjct: 196 PVRDSVLY 203



 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = -2

Query: 328 PDRNSISWSTLFIGYVRNRKFLKGIGLFRTMG-STWMIVASFRCWFVYANFQLRLCR--K 158
           P R+S+ ++ +F GYV+  + + G+ +FR MG S + + +      + A  QL   +  K
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255

Query: 157 SIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLIGYNTL 2
           S+HG+ +R+   +  ++  A+ + Y K  +LD    +FV M  +D+I +++L
Sbjct: 256 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 307


>gb|AAU94392.1| At4g14170 [Arabidopsis thaliana]
 gb|AAV59277.1| At4g14170 [Arabidopsis thaliana]
          Length = 458

 Score = 56.2 bits (134), Expect(2) = 2e-15
 Identities = 29/68 (42%), Positives = 39/68 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           T P ++ A   ++    G+  H L LKLGF S + + +AL+ MY     L  ARKLFD+M
Sbjct: 117 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 176

Query: 422 PERDRV*Y 399
           P RD V Y
Sbjct: 177 PVRDSVLY 184



 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 32/112 (28%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
 Frame = -2

Query: 328 PDRNSISWSTLFIGYVRNRKFLKGIGLFRTMG-STWMIVASFRCWFVYANFQLRLCR--K 158
           P R+S+ ++ +F GYV+  + + G+ +FR MG S + + +      + A  QL   +  K
Sbjct: 177 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 236

Query: 157 SIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLIGYNTL 2
           S+HG+ +R+   +  ++  A+ + Y K  +LD    +FV M  +D+I +++L
Sbjct: 237 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSL 288


>ref|XP_010259704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nelumbo nucifera]
          Length = 505

 Score = 65.1 bits (157), Expect(2) = 2e-15
 Identities = 27/64 (42%), Positives = 42/64 (65%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP L+ A  +   +H+G+  HC  +K GF S + + N+LIH+Y S+  + +A ++FDEM
Sbjct: 90  TFPFLLKACSVLSDLHKGQETHCHVIKQGFLSDIFVRNSLIHLYGSNSKIKIAHRIFDEM 149

Query: 422 PERD 411
           P RD
Sbjct: 150 PHRD 153



 Score = 45.1 bits (105), Expect(2) = 2e-15
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 6/115 (5%)
 Frame = -2

Query: 352 AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMI-----VASFRCWFVY 188
           A  +F   P+R+++S+S +  GY+R+  F + + LFR M    ++     ++S  C    
Sbjct: 173 ARKLFDRMPERSNVSFSAMIAGYIRHGWFKEALQLFRRMQIEGLVPNNSTLSSVLC--AC 230

Query: 187 ANFQLRLCRKSIHGYLV-RKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEK 26
           AN       + IH ++  R+  +  C +  ALI+ Y K G +   L +F    +K
Sbjct: 231 ANLGALDLGRWIHSFICEREGNKFDCRIITALIDMYFKCGSIKDALQVFAGAKKK 285


>ref|XP_009152041.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic [Brassica rapa]
          Length = 451

 Score = 56.2 bits (134), Expect(2) = 3e-15
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ A   + S+  G   H LALK GFF+ + + N L+ +Y     +D  RK+FDEM
Sbjct: 119 TFPFVIKACLASSSLRLGTQVHGLALKTGFFTDVFLQNTLMDLYFKCGKVDCGRKVFDEM 178

Query: 422 PERDRV*YIT 393
           P R+ V + T
Sbjct: 179 PGRNIVSWTT 188



 Score = 53.1 bits (126), Expect(2) = 3e-15
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
 Frame = -2

Query: 355 DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTM------GSTWMIVASFRCWF 194
           DAE VF   P RN +SW+ +   YV+NR+  +   LFR M       + + +V+  +   
Sbjct: 201 DAEVVFRQMPARNVVSWTAMIAAYVKNRRPDEAFQLFRRMQVDDVEPNEFTLVSMLQAST 260

Query: 193 VYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLIG 14
              +  +    + +H Y  +    + C +  ALI+ Y K G L+    +F  M  K L  
Sbjct: 261 QLGSLSM---GRWVHDYAHKNGFSLDCFLGTALIDMYSKCGSLEDARRVFDVMESKSLAT 317

Query: 13  YNTL 2
           +N++
Sbjct: 318 WNSM 321


>dbj|GAV58878.1| PPR domain-containing protein/PPR_2 domain-containing protein
           [Cephalotus follicularis]
          Length = 594

 Score = 51.6 bits (122), Expect(3) = 4e-15
 Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
 Frame = -2

Query: 352 AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTM--------GSTWMIVASFRCW 197
           A+ +F   P R+ ISW+T+   Y RNR F + + +F  M        G T   V S    
Sbjct: 241 AKKLFKQIPVRDKISWTTMINCYSRNRLFTEALAVFDEMTANGIRPDGVTMATVIS---- 296

Query: 196 FVYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLI 17
              A+       K +H Y+++       ++  +LI+ Y K G LD  L +F ++ EK+L 
Sbjct: 297 -ACAHLGALDLGKEMHLYVMQSGFDYDVYIGSSLIDMYAKCGSLDRSLLVFFKLREKNLF 355

Query: 16  GYNTL 2
            +N+L
Sbjct: 356 CWNSL 360



 Score = 49.7 bits (117), Expect(3) = 4e-15
 Identities = 27/64 (42%), Positives = 37/64 (57%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP LV A  L  ++  GE  H    K GF SH+ +  +LI  Y++   +  +RK+FDEM
Sbjct: 127 TFPSLVKACSLLSALRFGEGVHGHNWKHGFNSHVYVQTSLIDFYSNLSQIVESRKVFDEM 186

Query: 422 PERD 411
            ERD
Sbjct: 187 TERD 190



 Score = 27.7 bits (60), Expect(3) = 4e-15
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 417 ERSSLVYHSMMDGYVLSGDFETLKGCF 337
           +RS+  +++M+DGY   GD E+ K  F
Sbjct: 219 DRSTATWNTMIDGYARLGDVESAKKLF 245


>gb|OTF88240.1| putative pentatricopeptide repeat (PPR) superfamily protein
           [Helianthus annuus]
          Length = 567

 Score = 56.6 bits (135), Expect(2) = 5e-15
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
 Frame = -2

Query: 352 AEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTMGSTWMIVASFRCWFVYANFQL 173
           A G+F   P+RN +SW+ L  GY+  +     + LFRTM  T +I        V      
Sbjct: 247 AHGLFDRMPERNVVSWNVLMKGYLDGKNPGLVLKLFRTMVRTGVIWNDTTVVSVVTACG- 305

Query: 172 RLCR----KSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLIGYNT 5
           R CR    +S+HG L+R    +   +  ALI+ Y K G+ D    +F RM  K+L+ +N 
Sbjct: 306 RSCRLKEGRSVHGSLIRMSVNVSLIIGTALIDMYSKCGIPDVAQVIFNRMLVKNLVCWNA 365

Query: 4   L 2
           +
Sbjct: 366 M 366



 Score = 52.4 bits (124), Expect(2) = 5e-15
 Identities = 33/90 (36%), Positives = 50/90 (55%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP L++    +  +  G+ +H  A+K+G  + + + NALIHMYA     D+A K+FDEM
Sbjct: 164 TFPPLISVCGKSGDLLLGQEWHGQAVKVGVDTSLHVENALIHMYAGCGSNDVAWKVFDEM 223

Query: 422 PERDRV*YITR*WMGMC*VGTLRR*RGVFD 333
             RD V + +    G   VG +    G+FD
Sbjct: 224 SVRDLVSWNSM-VDGYAKVGDMGSAHGLFD 252


>emb|CDY13648.1| BnaA06g32750D [Brassica napus]
          Length = 343

 Score = 55.5 bits (132), Expect(2) = 6e-15
 Identities = 27/70 (38%), Positives = 41/70 (58%)
 Frame = -1

Query: 602 TFPQLVTAAKLNQSIHQGETFHCLALKLGFFSHMLMPNALIHMYASSDGLDLARKLFDEM 423
           TFP ++ A   + S+  G   H LA+K GFF+ + + N L+ +Y     +D  RK+FDEM
Sbjct: 11  TFPFVIKACLASSSLRLGTQVHGLAIKTGFFTDVFLQNTLMDLYFKCGKVDCGRKVFDEM 70

Query: 422 PERDRV*YIT 393
           P R+ V + T
Sbjct: 71  PGRNIVSWTT 80



 Score = 53.1 bits (126), Expect(2) = 6e-15
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
 Frame = -2

Query: 355 DAEGVFLMNPDRNSISWSTLFIGYVRNRKFLKGIGLFRTM------GSTWMIVASFRCWF 194
           DAE VF   P RN +SW+ +   YV+NR+  +   LFR M       + + +V+  +   
Sbjct: 93  DAEIVFRQMPTRNVVSWTAMIAAYVKNRRPDEAFQLFRRMQVDDVEPNEFTLVSMLQAST 152

Query: 193 VYANFQLRLCRKSIHGYLVRKWKRIPCHVSCALINFYRKSGLLDSVLNLFVRMHEKDLIG 14
              +  +    + +H Y  +    + C +  ALI+ Y K G L+    +F  M  K L  
Sbjct: 153 QLGSLSM---GRWVHDYAHKNGFSLDCFLGTALIDMYSKCGSLEDARRVFDVMESKSLAT 209

Query: 13  YNTL 2
           +N++
Sbjct: 210 WNSM 213