BLASTX nr result

ID: Ophiopogon26_contig00030272 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00030272
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243541.1| FBD-associated F-box protein At3g52670-like ...    55   7e-06

>ref|XP_020243541.1| FBD-associated F-box protein At3g52670-like isoform X1 [Asparagus
           officinalis]
 gb|ONK59910.1| uncharacterized protein A4U43_C08F12210 [Asparagus officinalis]
          Length = 492

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 20/178 (11%)
 Frame = -2

Query: 486 VFSNLKEFHWWPVLKTSPGACWPVEDFMEPSVRALISTLQYCPFLELLCMHGSYYM---- 319
           +F NLK+F W  ++              + ++RA++S L  CP LE L +   +Y     
Sbjct: 308 MFKNLKKFSWEGLV------------LCKNTLRAIVSFLNQCPVLETLYIDLDFYTSLMR 355

Query: 318 ---ERDDHLCDYMD------AALFVQERHGSNPLKK-------FNKANHLLARLKKVQVL 187
              E+ D + DY          + ++E  G  P++K       F      L RL    ++
Sbjct: 356 EAEEQQDQIDDYYPDDDVGPVEVELREDSGEPPIEKDKPFERFFADGGCSLPRLLTATIM 415

Query: 186 DFSCKKEEVQLVKFILSKASQLERMILYYDTEVNGKLREMQRVIGSLPKASQRAFVSL 13
           DFS   EE+Q ++FIL KA+ LE + L       G     +R+ G +P +S    ++L
Sbjct: 416 DFSGLNEEMQFLRFILQKATNLELLCLTLTCSTAGVEALSKRIYG-VPFSSPNLKINL 472


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