BLASTX nr result
ID: Ophiopogon26_contig00030198
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00030198
(484 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. sco... 55 8e-13
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 56 4e-12
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 56 4e-12
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 56 1e-11
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 56 1e-11
ref|XP_010068565.1| PREDICTED: MDIS1-interacting receptor like k... 54 2e-11
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 55 2e-11
gb|OAE35676.1| hypothetical protein AXG93_1154s1300 [Marchantia ... 50 2e-11
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235... 54 4e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 57 5e-11
ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342... 54 5e-11
ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329... 54 5e-11
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 55 8e-11
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 57 1e-10
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024... 52 2e-10
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 57 2e-10
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 51 2e-10
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 55 2e-10
gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposo... 51 5e-10
gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposo... 50 5e-10
>gb|ABG22119.1| polyprotein, partial [Cynara cardunculus var. scolymus]
Length = 358
Score = 55.5 bits (132), Expect(3) = 8e-13
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
Y G LD T YVFT+ CA++W A LQ T+ +STTEAEYM + E
Sbjct: 261 YGGDLDGRRSLTGYVFTMGSCAISWKAVLQPTVAVSTTEAEYMAITE 307
Score = 32.7 bits (73), Expect(3) = 8e-13
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTRLSL 293
++E MS V +SA+GSL+Y M+CTR L
Sbjct: 180 EKEYMSRVPYSSAVGSLMYAMICTRPDL 207
Score = 32.3 bits (72), Expect(3) = 8e-13
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C LAY VS VSRYM+NP +H
Sbjct: 200 MICTRPDLAYAVSMVSRYMANPGREH 225
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 55.8 bits (133), Expect(4) = 4e-12
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YA LD+ T YVFT+ CAV+W A LQ+ + +STTEAEYM + E
Sbjct: 1191 YAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICE 1237
Score = 30.8 bits (68), Expect(4) = 4e-12
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L+Y +S VSRYMSNP +H
Sbjct: 1130 MVCSRPDLSYAMSLVSRYMSNPGKEH 1155
Score = 29.6 bits (65), Expect(4) = 4e-12
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 1112 EYMSRVPYSSAVGSLMYAMVCSRPDL 1137
Score = 20.8 bits (42), Expect(4) = 4e-12
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 173 HFKLSSR*CPVT 208
HFKLS+ CP T
Sbjct: 1096 HFKLSAAQCPST 1107
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 55.8 bits (133), Expect(4) = 4e-12
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YA LD+ T YVFT+ CAV+W A LQ+ + +STTEAEYM + E
Sbjct: 1189 YAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICE 1235
Score = 30.8 bits (68), Expect(4) = 4e-12
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L+Y +S VSRYMSNP +H
Sbjct: 1128 MVCSRPDLSYAMSLVSRYMSNPGKEH 1153
Score = 29.6 bits (65), Expect(4) = 4e-12
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDL 1135
Score = 20.8 bits (42), Expect(4) = 4e-12
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 173 HFKLSSR*CPVT 208
HFKLS+ CP T
Sbjct: 1094 HFKLSAAQCPST 1105
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 55.8 bits (133), Expect(3) = 1e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YA LD+ T YVFT+ CAV+W A LQ+ + +STTEAEYM + E
Sbjct: 1189 YAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICE 1235
Score = 30.8 bits (68), Expect(3) = 1e-11
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L+Y +S VSRYMSNP +H
Sbjct: 1128 MVCSRPDLSYAMSLVSRYMSNPGKEH 1153
Score = 29.6 bits (65), Expect(3) = 1e-11
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDL 1135
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 55.8 bits (133), Expect(3) = 1e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YA LD+ T YVFT+ CAV+W A LQ+ + +STTEAEYM + E
Sbjct: 1189 YAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICE 1235
Score = 30.8 bits (68), Expect(3) = 1e-11
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L+Y +S VSRYMSNP +H
Sbjct: 1128 MVCSRPDLSYAMSLVSRYMSNPGKEH 1153
Score = 29.6 bits (65), Expect(3) = 1e-11
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 1110 EYMSRVPYSSAVGSLMYAMVCSRPDL 1135
>ref|XP_010068565.1| PREDICTED: MDIS1-interacting receptor like kinase 2 [Eucalyptus
grandis]
Length = 1365
Score = 53.9 bits (128), Expect(3) = 2e-11
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ F T YVFT+ A++W A LQ T+ +STTEAEYM + E
Sbjct: 248 FAGDLDKRRFITGYVFTLGGGAISWKAMLQATVALSTTEAEYMAITE 294
Score = 31.2 bits (69), Expect(3) = 2e-11
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C LA+ VS VSRYMSNP +H
Sbjct: 185 MVCSRPDLAHAVSLVSRYMSNPGKEH 210
Score = 30.4 bits (67), Expect(3) = 2e-11
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 180 SYPQDSVQSPQEEEMS*VSCASAIGSLIYVMLCTRLSL 293
S Q + + +MS V ASA+GSL+Y M+C+R L
Sbjct: 155 SEKQCPISHEEVVKMSRVPYASAVGSLMYAMVCSRPDL 192
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 55.1 bits (131), Expect(3) = 2e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ T YVFT+ CAV+W A LQ T+ +STTE EYM + E
Sbjct: 1067 FAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEVEYMAISE 1113
Score = 30.4 bits (67), Expect(3) = 2e-11
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L L++ +S VSRYM+NP +H
Sbjct: 1006 MVCSRLDLSHALSVVSRYMANPGKEH 1031
Score = 30.0 bits (66), Expect(3) = 2e-11
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V S +GSL+Y M+C+RL L
Sbjct: 988 EYMSRVPYLSVVGSLMYAMVCSRLDL 1013
>gb|OAE35676.1| hypothetical protein AXG93_1154s1300 [Marchantia polymorpha subsp.
ruderalis]
Length = 237
Score = 50.4 bits (119), Expect(3) = 2e-11
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
Y G +D T YVFT+ V+W A LQ T+ +STTEAEYM ++E
Sbjct: 185 YVGDVDSRRSMTSYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALIE 231
Score = 35.4 bits (80), Expect(3) = 2e-11
Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = +3
Query: 195 SVQSPQEEE-MS*VSCASAIGSLIYVMLCTRLSL 293
SVQ+ +E+E MS V AS +GSL+Y M+CTR +L
Sbjct: 118 SVQTEEEKEYMSRVPYASVVGSLMYAMVCTRPNL 151
Score = 29.6 bits (65), Expect(3) = 2e-11
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C LA+ VS VSRYM NP +H
Sbjct: 144 MVCTRPNLAFTVSVVSRYMVNPGKEH 169
>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
sylvestris]
Length = 985
Score = 53.9 bits (128), Expect(3) = 4e-11
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ TT Y+FT+ AV+W + LQ+ + +STTEAEYM VE
Sbjct: 525 YAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAEYMAAVE 571
Score = 32.7 bits (73), Expect(3) = 4e-11
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 4/32 (12%)
Frame = +3
Query: 201 QSPQEEE----MS*VSCASAIGSLIYVMLCTR 284
Q PQ E+ MS + ASA+GS++Y M+CTR
Sbjct: 435 QMPQSEDEVEHMSKIPYASAVGSIMYAMVCTR 466
Score = 28.1 bits (61), Expect(3) = 4e-11
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYMSNP +H
Sbjct: 462 MVCTRPDIAQSVSVVSRYMSNPGKRH 487
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 56.6 bits (135), Expect(3) = 5e-11
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ T YVFT+ CAV+W A LQ T+ +STTEAEYM + E
Sbjct: 1037 FAGDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISE 1083
Score = 30.0 bits (66), Expect(3) = 5e-11
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 958 EYMSRVPYSSAVGSLMYAMICSRPDL 983
Score = 27.7 bits (60), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L++ +S VSRYM+NP +H
Sbjct: 976 MICSRPDLSHALSVVSRYMANPGKEH 1001
>ref|XP_019435951.1| PREDICTED: uncharacterized protein LOC109342419, partial [Lupinus
angustifolius]
Length = 1102
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 263 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 309
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 620 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 666
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 977 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 1023
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 179 ENEEMSSVPYASAVGSLMYAMICTR 203
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 536 ENEEMSSVPYASAVGSLMYAMICTR 560
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 893 ENEEMSSVPYASAVGSLMYAMICTR 917
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 199 MICTRPDIAQAVSVVSRYMASPGKVH 224
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 556 MICTRPDIAQAVSVVSRYMASPGKVH 581
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 913 MICTRPDIAQAVSVVSRYMASPGKVH 938
>ref|XP_019418558.1| PREDICTED: uncharacterized protein LOC109329342, partial [Lupinus
angustifolius]
Length = 832
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 177 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 223
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 448 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 494
Score = 53.9 bits (128), Expect(3) = 5e-11
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ T YVFT+ C V+W A LQ+ + +STTEAEY+ V E
Sbjct: 719 YAGDLDKRRSLTGYVFTLCGCTVSWKATLQSIVALSTTEAEYIAVTE 765
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 93 ENEEMSSVPYASAVGSLMYAMICTR 117
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 364 ENEEMSSVPYASAVGSLMYAMICTR 388
Score = 35.8 bits (81), Expect(3) = 5e-11
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 210 QEEEMS*VSCASAIGSLIYVMLCTR 284
+ EEMS V ASA+GSL+Y M+CTR
Sbjct: 635 ENEEMSSVPYASAVGSLMYAMICTR 659
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 113 MICTRPDIAQAVSVVSRYMASPGKVH 138
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 384 MICTRPDIAQAVSVVSRYMASPGKVH 409
Score = 24.6 bits (52), Expect(3) = 5e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VSRYM++P H
Sbjct: 655 MICTRPDIAQAVSVVSRYMASPGKVH 680
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 54.7 bits (130), Expect(3) = 8e-11
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD TT YVFT+A+ V W + LQ+T+ +STTEAEYM + E
Sbjct: 955 YAGDLDNRRSTTGYVFTLAKAPVCWRSTLQSTVALSTTEAEYMALTE 1001
Score = 31.2 bits (69), Expect(3) = 8e-11
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 186 PQDSVQSPQEEEMS*VSCASAIGSLIYVMLCTR 284
P+D+ + MS V ASA+GSL+Y M+CTR
Sbjct: 867 PRDAAEKAY---MSKVPYASAVGSLMYAMVCTR 896
Score = 27.7 bits (60), Expect(3) = 8e-11
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C ++Y V VSRYM NP +H
Sbjct: 892 MVCTRPDISYAVGVVSRYMHNPGKEH 917
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 57.0 bits (136), Expect(3) = 1e-10
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ T YVFTV CAV+W A LQ T+ +STTEAEYM + E
Sbjct: 1097 FAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAISE 1143
Score = 28.1 bits (61), Expect(3) = 1e-10
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +3
Query: 138 HVRDRELDARWVTSSYPQDSVQSPQE----EEMS*VSCASAIGSLIYVMLCTRLSL 293
++ D +L + + + + S PQ E MS V +SA+ SL+Y M+C+R L
Sbjct: 988 NMHDAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDL 1043
Score = 27.7 bits (60), Expect(3) = 1e-10
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L++ +S VSRYM+NP +H
Sbjct: 1036 MVCSRPDLSHALSVVSRYMANPGKEH 1061
>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
Length = 1892
Score = 52.4 bits (124), Expect(3) = 2e-10
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
YAG LD+ TT Y+FT+ AV+W + LQ+ + +STTEAEYM E
Sbjct: 1750 YAGDLDRRRSTTGYIFTLVGSAVSWKSTLQSIVALSTTEAEYMAATE 1796
Score = 34.3 bits (77), Expect(3) = 2e-10
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 171 VTSSYPQDSVQSPQE----EEMS*VSCASAIGSLIYVMLCTR 284
+ S + +Q PQ E MS V ASA+GS++Y M+CTR
Sbjct: 1651 LASHFKLSELQMPQSMDEVEHMSKVPYASAVGSIMYAMVCTR 1692
Score = 25.8 bits (55), Expect(3) = 2e-10
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C +A VS VS+YM+NP +H
Sbjct: 1688 MVCTRPDIAQSVSVVSKYMANPGKRH 1713
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 57.0 bits (136), Expect(3) = 2e-10
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ T YVFT+ CAV+W A LQ T+ +STTEAEYM + E
Sbjct: 1160 FAGDLDRRRSITGYVFTIGGCAVSWKASLQATVALSTTEAEYMAIFE 1206
Score = 28.9 bits (63), Expect(3) = 2e-10
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C R L
Sbjct: 1081 EYMSRVPYSSAVGSLMYAMVCCRPDL 1106
Score = 26.6 bits (57), Expect(3) = 2e-10
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L++ +S V+RYM+NP +H
Sbjct: 1099 MVCCRPDLSHALSVVNRYMANPGKEH 1124
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 51.2 bits (121), Expect(3) = 2e-10
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+A LD+ T YVFT+ CAV+W A L++ + STTEAEYM + E
Sbjct: 1031 FAADLDKRRSLTGYVFTIGSCAVSWKATLRHVVAQSTTEAEYMAIAE 1077
Score = 30.8 bits (68), Expect(3) = 2e-10
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +S +GSL+Y M+C+RL L
Sbjct: 952 EYMSRVPYSSVVGSLMYAMVCSRLDL 977
Score = 30.4 bits (67), Expect(3) = 2e-10
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L L++ +S VSRYM+NP +H
Sbjct: 970 MVCSRLDLSHAMSLVSRYMANPGKEH 995
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 54.7 bits (130), Expect(3) = 2e-10
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG LD+ YVFT+ CAV+W A LQ T+ +STTEAEYM + E
Sbjct: 1395 FAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISE 1441
Score = 29.6 bits (65), Expect(3) = 2e-10
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 216 EEMS*VSCASAIGSLIYVMLCTRLSL 293
E MS V +SA+GSL+Y M+C+R L
Sbjct: 1316 EYMSRVPYSSAVGSLMYAMVCSRPDL 1341
Score = 27.7 bits (60), Expect(3) = 2e-10
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C L++ +S VSRYM+NP +H
Sbjct: 1334 MVCSRPDLSHALSVVSRYMANPGKEH 1359
>gb|KYP40337.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 51.2 bits (121), Expect(3) = 5e-10
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
+AG++D TT Y+FTV AV+W +++Q + +STTEAEY+ V E
Sbjct: 1125 FAGEIDHRRSTTGYIFTVGTTAVSWMSQIQKIVALSTTEAEYVAVTE 1171
Score = 33.1 bits (74), Expect(3) = 5e-10
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +3
Query: 171 VTSSYPQDSVQSPQEEE----MS*VSCASAIGSLIYVMLCTR 284
+ S + + QSP+ EE M+ ASAIGSL+Y M+CTR
Sbjct: 1027 LASHFRLSTDQSPKTEEEKELMAKTPYASAIGSLMYAMVCTR 1068
Score = 26.6 bits (57), Expect(3) = 5e-10
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C + Y V VSR+MSNP H
Sbjct: 1064 MVCTRPDIGYAVGVVSRFMSNPGKAH 1089
>gb|KYP68590.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 523
Score = 50.4 bits (119), Expect(3) = 5e-10
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2
Query: 344 YAGKLDQ*EFTTDYVFTVAECAVNWNAELQNTIDISTTEAEYMDVVE 484
Y G++D TT Y+FTV AV+W +++Q + +STTEAEY+ V E
Sbjct: 379 YGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAEYVAVTE 425
Score = 35.8 bits (81), Expect(3) = 5e-10
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
Frame = +3
Query: 201 QSPQEEE----MS*VSCASAIGSLIYVMLCTR 284
QSPQ EE M+ V ASAIGSL+Y M+CTR
Sbjct: 291 QSPQTEEERYFMAKVPYASAIGSLMYAMVCTR 322
Score = 24.6 bits (52), Expect(3) = 5e-10
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 265 MSCYVLGLAYVVSSVSRYMSNPENQH 342
M C + + V VSR+MSNP H
Sbjct: 318 MVCTRPDIGHAVGVVSRFMSNPGKAH 343