BLASTX nr result
ID: Ophiopogon26_contig00030135
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00030135
(572 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II su... 381 e-130
gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise... 384 e-128
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav... 393 e-128
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio... 393 e-128
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic... 392 e-128
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat... 392 e-127
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno... 392 e-127
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum... 392 e-127
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy... 392 e-127
gb|AAQ08513.1| RNA polymerase II largest subunit, partial [Pinus... 389 e-126
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse... 389 e-126
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar... 389 e-126
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir... 383 e-126
gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solan... 382 e-126
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor... 388 e-126
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus... 383 e-126
gb|AAS79685.1| RNA polymerase II large subunit, partial [Taxus c... 387 e-126
gb|AAS79686.1| RNA polymerase II large subunit, partial [Podocar... 387 e-126
gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja o... 387 e-125
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo... 382 e-125
>ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Juglans regia]
Length = 387
Score = 381 bits (978), Expect = e-130
Identities = 182/189 (96%), Positives = 184/189 (97%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 152 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 211
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 212 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 271
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQVFNLIIPKQI
Sbjct: 272 TLLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPKQI 331
Query: 30 NLLRTSAWH 4
NL RTSAWH
Sbjct: 332 NLTRTSAWH 340
>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
Length = 652
Score = 384 bits (987), Expect = e-128
Identities = 185/189 (97%), Positives = 186/189 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 30 NLLRTSAWH 4
NLLR S WH
Sbjct: 600 NLLRYSMWH 608
>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
Length = 1010
Score = 393 bits (1010), Expect = e-128
Identities = 189/190 (99%), Positives = 189/190 (99%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 339 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 398
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 399 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 458
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 459 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQI 518
Query: 30 NLLRTSAWHS 1
NLLRTSAWHS
Sbjct: 519 NLLRTSAWHS 528
>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron
tulipifera]
Length = 1010
Score = 393 bits (1010), Expect = e-128
Identities = 187/190 (98%), Positives = 190/190 (100%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 339 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 398
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 399 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 458
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKPRPLWTGKQVFNLIIPKQI
Sbjct: 459 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLIIPKQI 518
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 519 NLIRTSAWHS 528
>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
Length = 1013
Score = 392 bits (1008), Expect = e-128
Identities = 187/190 (98%), Positives = 190/190 (100%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 342 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 522 NLIRTSAWHS 531
>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
Length = 1010
Score = 392 bits (1007), Expect = e-127
Identities = 187/190 (98%), Positives = 189/190 (99%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 339 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 398
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 399 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 458
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 459 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQI 518
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 519 NLIRTSAWHS 528
>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
Length = 1010
Score = 392 bits (1007), Expect = e-127
Identities = 187/190 (98%), Positives = 189/190 (99%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 339 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 398
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 399 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 458
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 459 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQI 518
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 519 NLIRTSAWHS 528
>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
Length = 1009
Score = 392 bits (1006), Expect = e-127
Identities = 186/190 (97%), Positives = 190/190 (100%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 338 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 397
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 398 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 457
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKPRPLWTGKQVFNLIIPKQI
Sbjct: 458 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLIIPKQI 517
Query: 30 NLLRTSAWHS 1
NLLRTSAWH+
Sbjct: 518 NLLRTSAWHA 527
>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
Length = 1010
Score = 392 bits (1006), Expect = e-127
Identities = 188/190 (98%), Positives = 189/190 (99%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 339 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 398
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 399 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 458
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 459 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 518
Query: 30 NLLRTSAWHS 1
NL+R SAWHS
Sbjct: 519 NLIRQSAWHS 528
>gb|AAQ08513.1| RNA polymerase II largest subunit, partial [Pinus nigra]
Length = 1013
Score = 389 bits (1000), Expect = e-126
Identities = 185/190 (97%), Positives = 188/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 342 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I KPRP+WTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTIYKPRPIWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 522 NLIRTSAWHS 531
>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
Length = 1009
Score = 389 bits (999), Expect = e-126
Identities = 186/190 (97%), Positives = 188/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRY KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 338 REDGQRLDLRYSKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 397
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 398 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 457
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 458 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 517
Query: 30 NLLRTSAWHS 1
NL+ TSAWHS
Sbjct: 518 NLIXTSAWHS 527
>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
Length = 1009
Score = 389 bits (999), Expect = e-126
Identities = 187/190 (98%), Positives = 187/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 340 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 399
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 400 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 459
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 460 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQI 519
Query: 30 NLLRTSAWHS 1
NL R SAWHS
Sbjct: 520 NLSRASAWHS 529
>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
Length = 780
Score = 383 bits (983), Expect = e-126
Identities = 184/189 (97%), Positives = 186/189 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 97 RDDGQRLDLRYLKKSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 156
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 157 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 216
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 217 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQI 276
Query: 30 NLLRTSAWH 4
NLLR SAWH
Sbjct: 277 NLLRYSAWH 285
>gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solanum lycopersicum]
Length = 773
Score = 382 bits (981), Expect = e-126
Identities = 182/190 (95%), Positives = 186/190 (97%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
R+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 97 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 156
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 157 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 216
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 217 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQI 276
Query: 30 NLLRTSAWHS 1
NLLR S WH+
Sbjct: 277 NLLRYSVWHN 286
>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
Length = 1013
Score = 388 bits (996), Expect = e-126
Identities = 185/190 (97%), Positives = 187/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFV FNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 342 REDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVFFNRQPSLHKMSIMGHRIKIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+R SAWHS
Sbjct: 522 NLIRYSAWHS 531
>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
Length = 836
Score = 383 bits (984), Expect = e-126
Identities = 183/190 (96%), Positives = 186/190 (97%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
R+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 418 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 477
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 478 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 537
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQVFNLIIPKQI
Sbjct: 538 TLLGCRKITKRDTLIPKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPKQI 597
Query: 30 NLLRTSAWHS 1
NL+RTSAWHS
Sbjct: 598 NLIRTSAWHS 607
>gb|AAS79685.1| RNA polymerase II large subunit, partial [Taxus canadensis]
Length = 1013
Score = 387 bits (995), Expect = e-126
Identities = 184/190 (96%), Positives = 188/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 342 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+R SAWH+
Sbjct: 522 NLIRQSAWHA 531
>gb|AAS79686.1| RNA polymerase II large subunit, partial [Podocarpus macrophyllus]
Length = 1013
Score = 387 bits (995), Expect = e-126
Identities = 184/190 (96%), Positives = 189/190 (99%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 342 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P+PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPSPAILKPRPLWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+R SAWH+
Sbjct: 522 NLIRYSAWHA 531
>gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja occidentalis]
Length = 1013
Score = 387 bits (994), Expect = e-125
Identities = 184/190 (96%), Positives = 188/190 (98%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYS
Sbjct: 342 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYS 401
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 402 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 461
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQI
Sbjct: 462 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLIIPKQI 521
Query: 30 NLLRTSAWHS 1
NL+R SAWH+
Sbjct: 522 NLIRYSAWHA 531
>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
Length = 804
Score = 382 bits (980), Expect = e-125
Identities = 183/190 (96%), Positives = 186/190 (97%)
Frame = -3
Query: 570 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 391
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 351 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 410
Query: 390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 411 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 470
Query: 210 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 31
TLLGCRKITKRDT IEKDVFMNILMWWEDFDGKVPAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 471 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 530
Query: 30 NLLRTSAWHS 1
NL+R SAWHS
Sbjct: 531 NLIRFSAWHS 540