BLASTX nr result

ID: Ophiopogon26_contig00029861 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00029861
         (538 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK65235.1| tRNA pseudouridine(38/39) synthase [Asparagus off...    70   1e-10
ref|XP_020275256.1| tRNA pseudouridine(38/39) synthase isoform X...    70   1e-10
ref|XP_020275257.1| tRNA pseudouridine(38/39) synthase isoform X...    67   1e-09
ref|XP_020275255.1| tRNA pseudouridine(38/39) synthase isoform X...    67   1e-09
ref|XP_010916997.1| PREDICTED: tRNA pseudouridine(38/39) synthas...    57   3e-06
ref|XP_019704393.1| PREDICTED: tRNA pseudouridine(38/39) synthas...    57   3e-06

>gb|ONK65235.1| tRNA pseudouridine(38/39) synthase [Asparagus officinalis]
          Length = 462

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 536 EALSCLSTAEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDN 390
           E LSCLST EE P  PGKK R H+ L+LRPTEPSF+ERR KLD  T++D+
Sbjct: 413 ETLSCLSTPEEGPSEPGKKKRGHVPLILRPTEPSFDERRAKLDMRTIYDS 462


>ref|XP_020275256.1| tRNA pseudouridine(38/39) synthase isoform X2 [Asparagus
           officinalis]
          Length = 469

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 33/50 (66%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = -3

Query: 536 EALSCLSTAEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDN 390
           E LSCLST EE P  PGKK R H+ L+LRPTEPSF+ERR KLD  T++D+
Sbjct: 420 ETLSCLSTPEEGPSEPGKKKRGHVPLILRPTEPSFDERRAKLDMRTIYDS 469


>ref|XP_020275257.1| tRNA pseudouridine(38/39) synthase isoform X3 [Asparagus
           officinalis]
          Length = 468

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = -3

Query: 536 EALSCLST-AEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDN 390
           E LSCLST AEE P  PGKK R H+ L+LRPTEPSF+ERR KLD  T++D+
Sbjct: 418 ETLSCLSTPAEEGPSEPGKKKRGHVPLILRPTEPSFDERRAKLDMRTIYDS 468


>ref|XP_020275255.1| tRNA pseudouridine(38/39) synthase isoform X1 [Asparagus
           officinalis]
          Length = 470

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
 Frame = -3

Query: 536 EALSCLST-AEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDN 390
           E LSCLST AEE P  PGKK R H+ L+LRPTEPSF+ERR KLD  T++D+
Sbjct: 420 ETLSCLSTPAEEGPSEPGKKKRGHVPLILRPTEPSFDERRAKLDMRTIYDS 470


>ref|XP_010916997.1| PREDICTED: tRNA pseudouridine(38/39) synthase isoform X2 [Elaeis
           guineensis]
          Length = 506

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = -3

Query: 536 EALSCLSTAEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDNS-TCP*K 372
           EAL CL   +ES   PG+K + HI L+LRPTEPS++ERR KL+    H  S  CP K
Sbjct: 444 EALGCLPIPDESSAEPGRKKKGHIPLMLRPTEPSYDERRAKLNAKATHKRSPNCPEK 500


>ref|XP_019704393.1| PREDICTED: tRNA pseudouridine(38/39) synthase isoform X1 [Elaeis
           guineensis]
          Length = 507

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = -3

Query: 536 EALSCLSTAEESPG-PGKKNRCHISLVLRPTEPSFEERRTKLDCITVHDNS-TCP*K 372
           EAL CL   +ES   PG+K + HI L+LRPTEPS++ERR KL+    H  S  CP K
Sbjct: 445 EALGCLPIPDESSAEPGRKKKGHIPLMLRPTEPSYDERRAKLNAKATHKRSPNCPEK 501


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