BLASTX nr result

ID: Ophiopogon26_contig00029307 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00029307
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officina...   112   5e-26
ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officina...   112   5e-26

>ref|XP_020273202.1| protein SCAR4 isoform X2 [Asparagus officinalis]
          Length = 1186

 Score =  112 bits (280), Expect = 5e-26
 Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
 Frame = +1

Query: 4   ESTKQVAEASQGVISKRL-HSFSPSKCSISKQIYGALEETKSFGASEDDVISPTVEMTHE 180
           +  KQV E SQ  I+ +L HS S S+   SKQ + +++E ++ G S+DD+ S  VEMT E
Sbjct: 565 DCAKQVVEVSQDEITTQLGHSSSSSRSPNSKQRHNSVKEFRNLGTSQDDIGSRRVEMTLE 624

Query: 181 NSNMEPLCDAEESQEPCNMNSTRFIQPRSWKEELHDDMQPSSKASNFSMDAVHTEIVASF 360
           ++N++PLCD EESQEP N  S   +    WKEE+ D+ Q SSK S+FS DAVH E VASF
Sbjct: 625 STNLQPLCD-EESQEPYNTGS---LNSCPWKEEILDNTQQSSKVSDFSKDAVHAEAVASF 680

Query: 361 EHSSVKNVI 387
           E S+V+N I
Sbjct: 681 EQSAVQNSI 689


>ref|XP_020273201.1| protein SCAR4 isoform X1 [Asparagus officinalis]
 gb|ONK62638.1| uncharacterized protein A4U43_C07F6270 [Asparagus officinalis]
          Length = 1187

 Score =  112 bits (280), Expect = 5e-26
 Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
 Frame = +1

Query: 4   ESTKQVAEASQGVISKRL-HSFSPSKCSISKQIYGALEETKSFGASEDDVISPTVEMTHE 180
           +  KQV E SQ  I+ +L HS S S+   SKQ + +++E ++ G S+DD+ S  VEMT E
Sbjct: 566 DCAKQVVEVSQDEITTQLGHSSSSSRSPNSKQRHNSVKEFRNLGTSQDDIGSRRVEMTLE 625

Query: 181 NSNMEPLCDAEESQEPCNMNSTRFIQPRSWKEELHDDMQPSSKASNFSMDAVHTEIVASF 360
           ++N++PLCD EESQEP N  S   +    WKEE+ D+ Q SSK S+FS DAVH E VASF
Sbjct: 626 STNLQPLCD-EESQEPYNTGS---LNSCPWKEEILDNTQQSSKVSDFSKDAVHAEAVASF 681

Query: 361 EHSSVKNVI 387
           E S+V+N I
Sbjct: 682 EQSAVQNSI 690


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