BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00029248
         (629 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO49887.1| Endonuclease/exonuclease/phosphatase [Corchorus c...    40   2e-06

>gb|OMO49887.1| Endonuclease/exonuclease/phosphatase [Corchorus capsularis]
          Length = 434

 Score = 40.0 bits (92), Expect(2) = 2e-06
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 375 RPSFRPPTR-LSRTVVRMRMPDLPPVCWQPPIL-DIAFAAGRFICCDDTTSSLAKGRFVR 548
           +P+F P T  +  T V +R P LP  C+   IL  +    G+ I  D  T   ++GRF R
Sbjct: 106 QPNFNPATATIESTAVWVRFPVLPMECYHSRILMALGNKVGKAIKADYNTRMASRGRFAR 165

Query: 549 VATEID 566
           V  E+D
Sbjct: 166 VCVEVD 171



 Score = 39.7 bits (91), Expect(2) = 2e-06
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 170 IGKFLGRVLSPEKLLSSLTPKWALEREWELVP--PQLWLFRFTSIEDRYTILSRGP*VVD 343
           I K LGR +S   L   L   W  + +WEL+      +L +F + ED   ++  GP    
Sbjct: 37  IVKLLGRTISYTVLADRLEKLWKPKGDWELIDLGSGFYLAKFYAQEDLKFVVDEGPWSFF 96

Query: 344 DATLTLELWDPTF 382
              LT+ LW P F
Sbjct: 97  GHYLTMRLWQPNF 109