BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00029185
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020692938.1| RNA-binding protein 1-like [Dendrobium caten...    49   2e-08
gb|OVA09425.1| RNA recognition motif domain [Macleaya cordata] >...    50   3e-08
ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleop...    45   1e-07
ref|XP_008796977.1| PREDICTED: heterogeneous nuclear ribonucleop...    44   5e-06

>ref|XP_020692938.1| RNA-binding protein 1-like [Dendrobium catenatum]
 gb|PKU86106.1| Heterogeneous nuclear ribonucleoprotein 1 [Dendrobium catenatum]
          Length = 384

 Score = 48.5 bits (114), Expect(2) = 2e-08
 Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = -2

Query: 261 VEKMSTNDGNSQNNFNDSNGTMIGRRKSVVGTL---QMSYYPPYNPRYGFNFSYAPPLVS 91
           V++    DGN  +N N  +G +  R     GT    Q   YPPY+PRYG+ + YAPP V 
Sbjct: 211 VKRAVPKDGNHHSNDNYLSGHINSRASGGRGTYSNYQHVIYPPYDPRYGYFYGYAPPPVP 270

Query: 90  SF 85
           SF
Sbjct: 271 SF 272



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 395 LSSSITKVEFKSYFA*FWKTINVVIMYDSFT 303
           LS+++T+VEF+SYF  F    +VVIMYDS T
Sbjct: 146 LSANVTEVEFRSYFEKFGCITDVVIMYDSAT 176


>gb|OVA09425.1| RNA recognition motif domain [Macleaya cordata]
 gb|OVA09426.1| RNA recognition motif domain [Macleaya cordata]
          Length = 391

 Score = 50.4 bits (119), Expect(2) = 3e-08
 Identities = 24/59 (40%), Positives = 33/59 (55%)
 Frame = -2

Query: 261 VEKMSTNDGNSQNNFNDSNGTMIGRRKSVVGTLQMSYYPPYNPRYGFNFSYAPPLVSSF 85
           V++    DG++  N    N  M G R S+ G+ Q   YPPY+PRYG    YAPP +S +
Sbjct: 189 VKRAVPKDGSNNGNNGGFNMRMGGGRGSLFGSFQGGLYPPYSPRYGIYSGYAPPHLSGY 247



 Score = 35.0 bits (79), Expect(2) = 3e-08
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = -3

Query: 395 LSSSITKVEFKSYFA*FWKTINVVIMYDSFT 303
           L++++T+ EFK+YF  F +  +VV+MYDS T
Sbjct: 124 LAATLTEEEFKAYFEKFGRITDVVVMYDSAT 154


>ref|XP_010273569.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Nelumbo
           nucifera]
          Length = 408

 Score = 44.7 bits (104), Expect(2) = 1e-07
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
 Frame = -2

Query: 261 VEKMSTNDGNSQN---NFNDSNGTMIGRRKSVVGTLQMSYYPPYNPRYGFNFSYAP 103
           V++    DGN+ N   N++  N  + G R S+ G+ Q   YPPY+PRYG    YAP
Sbjct: 196 VKRAVPKDGNTNNCNSNYHGYNMRVGGGRGSLFGSYQCGVYPPYSPRYGVFPGYAP 251



 Score = 38.5 bits (88), Expect(2) = 1e-07
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -3

Query: 395 LSSSITKVEFKSYFA*FWKTINVVIMYDSFT 303
           LS+S+T+ EFKSYF  F +  +VV+MYDS T
Sbjct: 131 LSASLTEEEFKSYFEKFGRITDVVVMYDSTT 161


>ref|XP_008796977.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
           dactylifera]
 ref|XP_008796978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Phoenix
           dactylifera]
          Length = 372

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 261 VEKMSTNDGNSQNNFNDS-NGTMIGRRKSVVGTLQMSYYPPYNPRYGFNFSYAPP 100
           V K   N  N+ N  N++ N  M+G R  V+       Y PY PRYGF   YAPP
Sbjct: 214 VPKDGNNHSNNSNRDNNNYNSRMMGGRGPVLSNHPGGIYSPYTPRYGFFHGYAPP 268



 Score = 33.9 bits (76), Expect(2) = 5e-06
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -3

Query: 395 LSSSITKVEFKSYFA*FWKTINVVIMYDSFT 303
           LS +IT+ +FK+YF  F    +VV+MYDS T
Sbjct: 145 LSDNITEDDFKNYFQNFGVITDVVVMYDSVT 175