BLASTX nr result
ID: Ophiopogon26_contig00029087
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00029087
(563 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis] 76 1e-12
ref|XP_019427158.1| PREDICTED: uncharacterized protein LOC109335... 72 2e-11
gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis] 70 2e-10
gb|OMO50708.1| Zinc finger, CCHC-type [Corchorus capsularis] 70 2e-10
ref|XP_020596126.1| uncharacterized protein LOC110036103 [Phalae... 69 2e-10
gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii] 69 2e-10
gb|PNX86333.1| hypothetical protein L195_g042411, partial [Trifo... 69 4e-10
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ... 69 5e-10
gb|PKU87980.1| Retrovirus-related Pol polyprotein from transposo... 68 6e-10
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] 67 2e-09
dbj|BAH93941.1| Os07g0500000 [Oryza sativa Japonica Group] 67 2e-09
gb|PKU69257.1| Retrovirus-related Pol polyprotein from transposo... 66 3e-09
gb|PKU66571.1| Retrovirus-related Pol polyprotein from transposo... 66 3e-09
gb|PKU82366.1| Retrovirus-related Pol polyprotein from transposo... 64 1e-08
ref|XP_010239539.1| PREDICTED: uncharacterized protein LOC104585... 64 1e-08
ref|XP_022867375.1| uncharacterized protein LOC111387092 [Olea e... 60 2e-08
gb|PKU83306.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-08
gb|PKU61453.1| Retrovirus-related Pol polyprotein from transposo... 64 2e-08
ref|XP_020407143.1| uncharacterized protein LOC100282400 isoform... 64 2e-08
ref|XP_022859302.1| uncharacterized protein LOC111380069 [Olea e... 62 5e-08
>gb|OMO83306.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1165
Score = 75.9 bits (185), Expect = 1e-12
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P ER KL++ S MC+FLGY ++ KGY CY+ A+++ +SRH F+E +PYY++P S
Sbjct: 774 LPKNERTKLTSRSAMCVFLGYGIEQKGYRCYDPIARRIRVSRHVAFFEHIPYYSIPESSS 833
Query: 379 PSMPKSLMFLDP 344
+ L+ LDP
Sbjct: 834 VLTKEELIVLDP 845
>ref|XP_019427158.1| PREDICTED: uncharacterized protein LOC109335479 [Lupinus
angustifolius]
Length = 749
Score = 72.4 bits (176), Expect = 2e-11
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P +ER+KL+ S +C+FLGY KGY CYN + ++L+ISRH F E LP+Y++P
Sbjct: 583 LPHVERSKLTPRSAICVFLGYGDGQKGYRCYNPSTRKLYISRHVVFLEHLPFYSIPSDSQ 642
Query: 379 PSMPKSLMFLDPDIYD 332
L+ +DP + D
Sbjct: 643 NITRSDLIHIDPFVAD 658
>gb|OMO56344.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1095
Score = 69.7 bits (169), Expect = 2e-10
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P ER KL++ S MC+F+GY ++ KGY CY+ A+++ +SR+ F+E +PYY +P S
Sbjct: 700 LPKNERTKLTSRSAMCVFMGYGIEQKGYRCYDPIARRIRVSRNVAFFEHIPYYTVPESSS 759
Query: 379 PSMPKSLMFLDP 344
L LDP
Sbjct: 760 TLTKDELHALDP 771
>gb|OMO50708.1| Zinc finger, CCHC-type [Corchorus capsularis]
Length = 2413
Score = 69.7 bits (169), Expect = 2e-10
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P ER KL++ S MC+F+GY ++ KGY CY+ A+++ +SR+ F+E +PYY +P S
Sbjct: 1743 LPKNERTKLTSRSAMCVFMGYGIEQKGYRCYDPIARRIRVSRNVAFFEHIPYYTVPESSS 1802
Query: 379 PSMPKSLMFLDP 344
L LDP
Sbjct: 1803 TLTKDELHALDP 1814
>ref|XP_020596126.1| uncharacterized protein LOC110036103 [Phalaenopsis equestris]
Length = 613
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P ++RNKLS+ S +C+F+GY KGY CY+ + ++L +SRH F+E +PYY S+P
Sbjct: 380 LPHVQRNKLSSRSAICVFIGYGDGQKGYCCYDPDTQKLFVSRHVVFFEHIPYY----SIP 435
Query: 379 PSMPKSLMFLDPDIYDP 329
PS S DP DP
Sbjct: 436 PS-SHSFTKSDPIPIDP 451
>gb|AGJ83729.1| gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 69.3 bits (168), Expect = 2e-10
Identities = 34/83 (40%), Positives = 51/83 (61%)
Frame = -2
Query: 556 PSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPP 377
P +ER+KLS+ S +C+FLGY KGY CY+ +A++L++SRH F E +P+Y+ FS
Sbjct: 232 PQVERSKLSSRSAICVFLGYGDGQKGYRCYDPHARKLYVSRHVVFLEHIPFYS--FSSES 289
Query: 376 SMPKSLMFLDPDIYDPISDASTD 308
S+ S D + P S+D
Sbjct: 290 SITNSSELTHIDPFGPNDSTSSD 312
>gb|PNX86333.1| hypothetical protein L195_g042411, partial [Trifolium pratense]
Length = 462
Score = 68.6 bits (166), Expect = 4e-10
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = -2
Query: 556 PSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPP 377
P +ERNKLS S +C+FLGY KGY CY+ ++K+L++SRH F E +P+++L
Sbjct: 131 PQVERNKLSPRSTICVFLGYGAGQKGYRCYDPSSKKLYVSRHVVFLEHIPFFSLSSDSNT 190
Query: 376 SMPKSLMFLDPDIYDPISDASTD 308
L +DP D D S+D
Sbjct: 191 PSRSELTNIDPFGLD--DDISSD 211
>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gb|ABB47666.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1682
Score = 68.6 bits (166), Expect = 5e-10
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -2
Query: 547 ERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMP 368
ER KL+A SV C+FLGYSL+HKGY CY+ +A+++ ISR TF E P++ + P S
Sbjct: 563 ERTKLTAQSVECVFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFFYSSTNQPSSPE 622
Query: 367 KSLMFL 350
S+ FL
Sbjct: 623 NSISFL 628
>gb|PKU87980.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 790
Score = 68.2 bits (165), Expect = 6e-10
Identities = 36/73 (49%), Positives = 45/73 (61%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMPKS 362
+KL+ S CIFLGYS QHKGY CYN +LHISRH FYE L Y P + P+ P+S
Sbjct: 228 HKLAPRSSPCIFLGYSPQHKGYRCYNTQTHKLHISRHVRFYEHLQPYKEPLTNLPN-PQS 286
Query: 361 LMFLDPDIYDPIS 323
++ P + P S
Sbjct: 287 DTYIPPMLLTPSS 299
>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = -2
Query: 556 PSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPP 377
P +ERNKLS+ S +C+FLGY KGY C++ ++L++S H F E +P++++P +
Sbjct: 716 PHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQKLYVSHHVVFLEHIPFFSIPSTTHS 775
Query: 376 SMPKSLMFLDPDIYDPISDAS 314
L+ +DP D +D S
Sbjct: 776 LTKSDLIHIDPFSEDSGNDTS 796
>dbj|BAH93941.1| Os07g0500000 [Oryza sativa Japonica Group]
Length = 662
Score = 66.6 bits (161), Expect = 2e-09
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -2
Query: 547 ERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMP 368
ER KL+A SV C+FLGYSL+HKGY CY+ +A+++ ISR TF E P++ S S
Sbjct: 341 ERTKLTAQSVECVFLGYSLEHKGYRCYDPSARRIRISRDVTFDENKPFFYSSTSQSSSPT 400
Query: 367 KSLMFL 350
S+ FL
Sbjct: 401 NSISFL 406
>gb|PKU69257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 883
Score = 66.2 bits (160), Expect = 3e-09
Identities = 37/74 (50%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERL-PYYALPFSLPPSMPK 365
+KL+ S CIFLGYS QHKGY CYN +LHISRH FYE L PY +LP P
Sbjct: 228 HKLAPRSSPCIFLGYSSQHKGYRCYNTQTHKLHISRHVRFYEHLQPYKESATNLP--NPP 285
Query: 364 SLMFLDPDIYDPIS 323
S ++ P + P S
Sbjct: 286 SNTYIPPMLLTPTS 299
>gb|PKU66571.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1058
Score = 66.2 bits (160), Expect = 3e-09
Identities = 35/77 (45%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYE-RLPYYAL----PFSLPP 377
NKL S C+FLGYS KGY CYNL +++HISRH F+E PY+ L P S PP
Sbjct: 573 NKLQPRSQDCVFLGYSSSQKGYRCYNLQTRKIHISRHVIFHETHFPYHNLSPPPPISSPP 632
Query: 376 SMPKSLMFLDPDIYDPI 326
+ LM + PI
Sbjct: 633 PISSPLMLIPTSTLKPI 649
>gb|PKU82366.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1357
Score = 63.9 bits (154), Expect(2) = 1e-08
Identities = 42/120 (35%), Positives = 58/120 (48%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMPKS 362
NKLS S CIF+GYS QHKGY C ++ +K+++ISRH F E PF+LPP+
Sbjct: 702 NKLSPRSTECIFIGYSSQHKGYRCLHIPSKRIYISRHVKFVEN----TFPFTLPPAN--- 754
Query: 361 LMFLDPDIYDPISDASTDAIXXXXXXXPCSSTQVYQLLSMILIYILNEASPLHSTQNRHP 182
P P +D I S + S L ++ ASP H+T + +P
Sbjct: 755 ----RPKDTPPRTDNPLLLIPTSQLTHSSSQVPIVHSSSQGLSSPIHGASPQHTTTSTNP 810
Score = 23.1 bits (48), Expect(2) = 1e-08
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 104 PQSYHEAIKVHEWQEDMNKELRALQ 30
P SY +A + W+ M E ALQ
Sbjct: 851 PTSYKQASQHEHWRTAMKAEFSALQ 875
>ref|XP_010239539.1| PREDICTED: uncharacterized protein LOC104585207 [Brachypodium
distachyon]
Length = 1289
Score = 64.3 bits (155), Expect = 1e-08
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = -2
Query: 547 ERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMP 368
ER KL+A SV C+F GY +HKGY C++ NA+++ ISR TF E P+Y P S +
Sbjct: 611 ERTKLTAQSVECVFFGYDDEHKGYRCWDPNARRIRISRDVTFDESRPFYPRPSSPEVTPV 670
Query: 367 KSLMFL 350
+SL FL
Sbjct: 671 ESLFFL 676
>ref|XP_022867375.1| uncharacterized protein LOC111387092 [Olea europaea var.
sylvestris]
Length = 1045
Score = 60.1 bits (144), Expect(2) = 2e-08
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLP 380
+P E KL S +C FLGY ++HK Y CY+ AK+L +SRH F+E + +
Sbjct: 344 LPPHEHTKLKPRSRLCYFLGYGIEHKDYRCYDSIAKRLRVSRHVQFWEHEVFTNIFPLSS 403
Query: 379 PSMPKSLMFLDP------DIYDPISDASTDAIXXXXXXXPCSSTQVYQLLSMILIYILNE 218
+ SL+F+DP D + S+ S+ Y + S L E
Sbjct: 404 DCLSYSLIFIDPAIDLSLDFSFNVGHVSSSGDHSTPISHETGSSDDYAIASTPL-----E 458
Query: 217 ASPL---HSTQNRHPPYRLNVFALFHLL 143
+S L S++ R PP LN + F +L
Sbjct: 459 SSDLDVRRSSRVRAPPMHLNNYYYFSIL 486
Score = 26.2 bits (56), Expect(2) = 2e-08
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 107 EPQSYHEAIKVHEWQEDMNKELRALQHTHMRSYL 6
EP++Y E WQ+ M++EL L T + +L
Sbjct: 491 EPRNYRETCSDPVWQQAMSEELDVLYKTILGIWL 524
>gb|PKU83306.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 883
Score = 63.9 bits (154), Expect = 2e-08
Identities = 34/73 (46%), Positives = 42/73 (57%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPPSMPKS 362
+KL+ S CIFLGYS HKGY CYN +LHIS H FYE L Y P + S+P S
Sbjct: 228 HKLAPRSTPCIFLGYSPHHKGYRCYNTQTHKLHISCHVRFYEHLQPYNEPLT-TSSLPHS 286
Query: 361 LMFLDPDIYDPIS 323
++ P + P S
Sbjct: 287 NTYIHPMLLTPSS 299
>gb|PKU61453.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 811
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 541 NKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERL-PYYALPFSLPPSMPK 365
NKLS S CI LGYS HKGY CYNL+ ++HISRH F+E + PY + P
Sbjct: 147 NKLSPRSQECILLGYSTSHKGYKCYNLHTHKIHISRHVEFHEHIFPYKNIKSQSQEPSPT 206
Query: 364 SLMFLDPDIYDPIS 323
+ + P + P+S
Sbjct: 207 TPTHISPYLLTPVS 220
>ref|XP_020407143.1| uncharacterized protein LOC100282400 isoform X1 [Zea mays]
ref|XP_020407144.1| uncharacterized protein LOC100282400 isoform X1 [Zea mays]
Length = 825
Score = 63.5 bits (153), Expect = 2e-08
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 18/101 (17%)
Frame = -2
Query: 559 IPSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYY------- 401
+P ER KL+A SV C+FLGYS +HKGY CY+ + +++ ISR +F E P++
Sbjct: 141 LPPHERTKLTAQSVECVFLGYSPEHKGYRCYDPSTRRIRISRDVSFNENRPFFHNQSTHS 200
Query: 400 -----------ALPFSLPPSMPKSLMFLDPDIYDPISDAST 311
LP S+PPS P S DI PI+ ST
Sbjct: 201 TYYPTESTSFMCLP-SIPPSEPSSSTSTS-DILIPITPPST 239
>ref|XP_022859302.1| uncharacterized protein LOC111380069 [Olea europaea var.
sylvestris]
Length = 620
Score = 62.4 bits (150), Expect = 5e-08
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = -2
Query: 556 PSIERNKLSA*SVMCIFLGYSLQHKGY*CYNLNAKQLHISRHFTFYERLPYYALPFSLPP 377
P +ER+KLS+ S +C+FL Y KGY C++ ++L++SRH F E +P++++P +
Sbjct: 497 PHVERSKLSSRSAICVFLAYGGGKKGYHCFDPITQKLYVSRHVVFLEHIPFFSIPSTTHS 556
Query: 376 SMPKSLMFLDPDIYDPISDASTD 308
L+ +DP P S +S +
Sbjct: 557 LTRSDLIRIDPFSNSPDSLSSQE 579