BLASTX nr result

ID: Ophiopogon26_contig00028585 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028585
         (712 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015619298.1| PREDICTED: uncharacterized protein LOC107279...    48   3e-06
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    41   4e-06
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    43   8e-06

>ref|XP_015619298.1| PREDICTED: uncharacterized protein LOC107279689 [Oryza sativa
            Japonica Group]
          Length = 1618

 Score = 47.8 bits (112), Expect(2) = 3e-06
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = -1

Query: 550  QCKLFTLFSLQ-KC*LLENTNQCTIDS--CCPFCDVYAETTSHVLLHCSFACEVW 395
            +CK F  F+ Q +C   +   +C IDS   CPFC    ET +H+L+ C FA +VW
Sbjct: 1470 KCKFFLWFAFQQRCWTADLLQKCGIDSHSACPFCAQELETANHILIDCVFARQVW 1524



 Score = 32.0 bits (71), Expect(2) = 3e-06
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 278  TAMDSTAMAVIWSIWTERNNRIFNNGHETTCAKSGHAEYFTQLW 147
            ++ DS  + V W +W ERN+R+F++   +            QLW
Sbjct: 1561 SSFDSLVLLVSWQLWKERNSRVFDSALASVAVVLESFRSEGQLW 1604


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 478  DSCCPFCDVYAETTSHVLLHCSFACEVW 395
            DS CP C+   ET+ H+LLHC FA  +W
Sbjct: 1087 DSSCPMCNSTPETSDHLLLHCLFAQRIW 1114



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 8/38 (21%)
 Frame = -3

Query: 293  DQWDSTAMD--------STAMAVIWSIWTERNNRIFNN 204
            DQW ST           S    V+WS+W ERN+RIFNN
Sbjct: 1136 DQWQSTNKSPFFKKIWASIFFIVVWSVWKERNDRIFNN 1173


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 42.7 bits (99), Expect(2) = 8e-06
 Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -1

Query: 478  DSCCPFCDVYAETTSHVLLHCSFACEVWNQFQLQFQLHSW--PRTI 347
            D+ C FC++  ETT+H+LLHC F+ ++W  + L    +SW  P++I
Sbjct: 1087 DAVCVFCNIGLETTNHLLLHCEFSWKLWT-WWLNIWGYSWAFPKSI 1131



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = -3

Query: 251  VIWSIWTERNNRIFNNGHET 192
            +IWS+W ERN+RIFNN + +
Sbjct: 1158 IIWSLWKERNSRIFNNSNSS 1177


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