BLASTX nr result
ID: Ophiopogon26_contig00028466
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00028466
(1419 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus... 149 3e-35
ref|XP_020273292.1| probable RNA polymerase II transcription fac... 149 3e-35
ref|XP_017700276.1| PREDICTED: probable RNA polymerase II transc... 138 8e-32
ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transc... 138 9e-32
ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transc... 138 2e-31
ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transc... 138 2e-31
ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transc... 138 2e-31
ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transc... 138 2e-31
ref|XP_010928646.1| PREDICTED: probable RNA polymerase II transc... 132 5e-30
ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transc... 132 1e-29
gb|OVA05707.1| BSD [Macleaya cordata] 132 2e-29
ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transc... 130 4e-29
ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transc... 130 8e-29
ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transc... 130 1e-28
ref|XP_008800224.1| PREDICTED: probable RNA polymerase II transc... 128 3e-28
ref|XP_009414712.1| PREDICTED: probable RNA polymerase II transc... 127 1e-27
ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transc... 123 6e-27
ref|XP_020679857.1| probable RNA polymerase II transcription fac... 117 6e-25
ref|XP_020679856.1| probable RNA polymerase II transcription fac... 117 1e-24
ref|XP_020679855.1| probable RNA polymerase II transcription fac... 117 1e-24
>gb|ONK79246.1| uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 149 bits (375), Expect = 3e-35
Identities = 91/163 (55%), Positives = 110/163 (67%), Gaps = 4/163 (2%)
Frame = -1
Query: 1419 ESTETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANAL 1240
ES ETSDEN +LERLERV RMT I EDLQGP NLPYAPL IKD EYFDC+ ANAL
Sbjct: 361 ESNETSDENEDLERLERVSRMTEI-----EDLQGPQNLPYAPLCIKDPHEYFDCQLANAL 415
Query: 1239 KSLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLS-IMKEVA 1063
K+LGDS AGIKP D S++ EA++ AEQISEVK +GL+DPVVQPEIALK L+ + + ++
Sbjct: 416 KALGDSGAGIKP-DCSLNAEEAYVYLAEQISEVKFRGLNDPVVQPEIALKVLNGLNQHIS 474
Query: 1062 ST---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
ST K P + V LP E++ + S+ L F
Sbjct: 475 STKFHFGKSPQES---VLDTLPNRTKEELLHNWTSIQELLRHF 514
>ref|XP_020273292.1| probable RNA polymerase II transcription factor B subunit 1-1
[Asparagus officinalis]
Length = 605
Score = 149 bits (375), Expect = 3e-35
Identities = 91/163 (55%), Positives = 110/163 (67%), Gaps = 4/163 (2%)
Frame = -1
Query: 1419 ESTETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANAL 1240
ES ETSDEN +LERLERV RMT I EDLQGP NLPYAPL IKD EYFDC+ ANAL
Sbjct: 370 ESNETSDENEDLERLERVSRMTEI-----EDLQGPQNLPYAPLCIKDPHEYFDCQLANAL 424
Query: 1239 KSLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLS-IMKEVA 1063
K+LGDS AGIKP D S++ EA++ AEQISEVK +GL+DPVVQPEIALK L+ + + ++
Sbjct: 425 KALGDSGAGIKP-DCSLNAEEAYVYLAEQISEVKFRGLNDPVVQPEIALKVLNGLNQHIS 483
Query: 1062 ST---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
ST K P + V LP E++ + S+ L F
Sbjct: 484 STKFHFGKSPQES---VLDTLPNRTKEELLHNWTSIQELLRHF 523
>ref|XP_017700276.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X4 [Phoenix dactylifera]
Length = 525
Score = 138 bits (347), Expect = 8e-32
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Frame = -1
Query: 1413 TETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKS 1234
TETSDE N ERLE+V RMT I EDLQ PH+LPYAPL IKD REYFD ++ANA+K+
Sbjct: 291 TETSDEKTNQERLEKVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANAVKA 345
Query: 1233 LGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST- 1057
LGD+ AGIKP D S+ EA+ EQISEVK++GL++ VVQPE LK L+ + S+
Sbjct: 346 LGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLKVLNGLNPYLSST 405
Query: 1056 ---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K+P +C V MLP E++ + S+ L F
Sbjct: 406 KYHLGKKPQEC---VLDMLPNRTKDELLHHWTSIQELLRHF 443
>ref|XP_008789680.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X3 [Phoenix dactylifera]
Length = 542
Score = 138 bits (347), Expect = 9e-32
Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S ETSDE N ERL+RV RMT I EDLQ PH+LPYAPL IKD REYFD ++ANALK
Sbjct: 307 SAETSDEKTNQERLKRVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANALK 361
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ A IKP D S+S EA+I EQISEVK++GL++PVVQPE ALK L+ + + S+
Sbjct: 362 ALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGLNQYLSS 421
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P + V LP E++ + S+ L F
Sbjct: 422 TKYHLGKNPQES---VLDRLPNRTKDELMHHWTSIQELLRHF 460
>ref|XP_017700274.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 138 bits (347), Expect = 2e-31
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Frame = -1
Query: 1413 TETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKS 1234
TETSDE N ERLE+V RMT I EDLQ PH+LPYAPL IKD REYFD ++ANA+K+
Sbjct: 372 TETSDEKTNQERLEKVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANAVKA 426
Query: 1233 LGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST- 1057
LGD+ AGIKP D S+ EA+ EQISEVK++GL++ VVQPE LK L+ + S+
Sbjct: 427 LGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLKVLNGLNPYLSST 486
Query: 1056 ---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K+P +C V MLP E++ + S+ L F
Sbjct: 487 KYHLGKKPQEC---VLDMLPNRTKDELLHHWTSIQELLRHF 524
>ref|XP_008789679.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 138 bits (347), Expect = 2e-31
Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S ETSDE N ERL+RV RMT I EDLQ PH+LPYAPL IKD REYFD ++ANALK
Sbjct: 371 SAETSDEKTNQERLKRVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANALK 425
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ A IKP D S+S EA+I EQISEVK++GL++PVVQPE ALK L+ + + S+
Sbjct: 426 ALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGLNQYLSS 485
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P + V LP E++ + S+ L F
Sbjct: 486 TKYHLGKNPQES---VLDRLPNRTKDELMHHWTSIQELLRHF 524
>ref|XP_008789678.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 138 bits (347), Expect = 2e-31
Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S ETSDE N ERL+RV RMT I EDLQ PH+LPYAPL IKD REYFD ++ANALK
Sbjct: 372 SAETSDEKTNQERLKRVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANALK 426
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ A IKP D S+S EA+I EQISEVK++GL++PVVQPE ALK L+ + + S+
Sbjct: 427 ALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGLNQYLSS 486
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P + V LP E++ + S+ L F
Sbjct: 487 TKYHLGKNPQES---VLDRLPNRTKDELMHHWTSIQELLRHF 525
>ref|XP_008800215.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 138 bits (347), Expect = 2e-31
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Frame = -1
Query: 1413 TETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKS 1234
TETSDE N ERLE+V RMT I EDLQ PH+LPYAPL IKD REYFD ++ANA+K+
Sbjct: 373 TETSDEKTNQERLEKVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANAVKA 427
Query: 1233 LGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST- 1057
LGD+ AGIKP D S+ EA+ EQISEVK++GL++ VVQPE LK L+ + S+
Sbjct: 428 LGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLKVLNGLNPYLSST 487
Query: 1056 ---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K+P +C V MLP E++ + S+ L F
Sbjct: 488 KYHLGKKPQEC---VLDMLPNRTKDELLHHWTSIQELLRHF 525
>ref|XP_010928646.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Elaeis guineensis]
Length = 503
Score = 132 bits (333), Expect = 5e-30
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Frame = -1
Query: 1410 ETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKSL 1231
ETSDE N ERL+RV RMT I EDLQ P++LPYAPL IKD REYFD ++ANALK+
Sbjct: 270 ETSDEKTNQERLKRVSRMTEI-----EDLQAPYSLPYAPLCIKDPREYFDLQQANALKAF 324
Query: 1230 GDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST-- 1057
GD+ AG KP D S+S EA++ EQISE+K++GL++PVVQPE ALK L+ + + S+
Sbjct: 325 GDTDAGTKPIDCSLSTEEAYVHLMEQISEMKVRGLNNPVVQPEAALKVLNGLNQYLSSTK 384
Query: 1056 --LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P + V LP E++ + S+ L F
Sbjct: 385 YHLGKNPQES---VLDRLPNRTKDELMHHWTSIQELLRHF 421
>ref|XP_010928645.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Elaeis guineensis]
Length = 607
Score = 132 bits (333), Expect = 1e-29
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
Frame = -1
Query: 1410 ETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKSL 1231
ETSDE N ERL+RV RMT I EDLQ P++LPYAPL IKD REYFD ++ANALK+
Sbjct: 374 ETSDEKTNQERLKRVSRMTEI-----EDLQAPYSLPYAPLCIKDPREYFDLQQANALKAF 428
Query: 1230 GDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST-- 1057
GD+ AG KP D S+S EA++ EQISE+K++GL++PVVQPE ALK L+ + + S+
Sbjct: 429 GDTDAGTKPIDCSLSTEEAYVHLMEQISEMKVRGLNNPVVQPEAALKVLNGLNQYLSSTK 488
Query: 1056 --LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P + V LP E++ + S+ L F
Sbjct: 489 YHLGKNPQES---VLDRLPNRTKDELMHHWTSIQELLRHF 525
>gb|OVA05707.1| BSD [Macleaya cordata]
Length = 608
Score = 132 bits (331), Expect = 2e-29
Identities = 73/131 (55%), Positives = 95/131 (72%), Gaps = 4/131 (3%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
+TE SD+ AN ERLERV RM I EDLQ PHNLP+APL+IKD REYFD ++ANALK
Sbjct: 374 ATEKSDDKANQERLERVSRMAEI-----EDLQAPHNLPFAPLFIKDPREYFDSQQANALK 428
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLS-IMKEVAS 1060
+LGD+ G K + S+S G+A+ S E ISE+K+ GLSDPVV+PE+ALK L+ + + ++S
Sbjct: 429 ALGDAGVGTKTINCSLSTGQAYGSLRELISEMKVTGLSDPVVKPEVALKVLNGLTQHLSS 488
Query: 1059 T---LSKEPNK 1036
T L K P +
Sbjct: 489 TKYNLGKNPQE 499
>ref|XP_010913640.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X3 [Elaeis guineensis]
Length = 503
Score = 130 bits (326), Expect = 4e-29
Identities = 79/162 (48%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
STE SDE N ER+E+V RMT I EDLQ P +LP+APL IKD REYFD ++ANA K
Sbjct: 268 STEISDEKTNQERMEKVSRMTEI-----EDLQAPCSLPFAPLCIKDPREYFDSQQANAFK 322
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ GI P D S+ EA+I EQISEVK++GL+ PVVQPE ALK L+ + S+
Sbjct: 323 ALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALKVLNGLNPYLSS 382
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P +C V LP E++ + S+ L F
Sbjct: 383 TKYHLGKNPQEC---VLDRLPNRTKDELMHHWTSIQELLRHF 421
>ref|XP_010913639.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Elaeis guineensis]
Length = 566
Score = 130 bits (326), Expect = 8e-29
Identities = 79/162 (48%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
STE SDE N ER+E+V RMT I EDLQ P +LP+APL IKD REYFD ++ANA K
Sbjct: 331 STEISDEKTNQERMEKVSRMTEI-----EDLQAPCSLPFAPLCIKDPREYFDSQQANAFK 385
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ GI P D S+ EA+I EQISEVK++GL+ PVVQPE ALK L+ + S+
Sbjct: 386 ALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALKVLNGLNPYLSS 445
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P +C V LP E++ + S+ L F
Sbjct: 446 TKYHLGKNPQEC---VLDRLPNRTKDELMHHWTSIQELLRHF 484
>ref|XP_010913638.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Elaeis guineensis]
Length = 606
Score = 130 bits (326), Expect = 1e-28
Identities = 79/162 (48%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
STE SDE N ER+E+V RMT I EDLQ P +LP+APL IKD REYFD ++ANA K
Sbjct: 371 STEISDEKTNQERMEKVSRMTEI-----EDLQAPCSLPFAPLCIKDPREYFDSQQANAFK 425
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGD+ GI P D S+ EA+I EQISEVK++GL+ PVVQPE ALK L+ + S+
Sbjct: 426 ALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALKVLNGLNPYLSS 485
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
L K P +C V LP E++ + S+ L F
Sbjct: 486 TKYHLGKNPQEC---VLDRLPNRTKDELMHHWTSIQELLRHF 524
>ref|XP_008800224.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X3 [Phoenix dactylifera]
Length = 567
Score = 128 bits (322), Expect = 3e-28
Identities = 68/108 (62%), Positives = 81/108 (75%)
Frame = -1
Query: 1413 TETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALKS 1234
TETSDE N ERLE+V RMT I EDLQ PH+LPYAPL IKD REYFD ++ANA+K+
Sbjct: 373 TETSDEKTNQERLEKVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQANAVKA 427
Query: 1233 LGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALK 1090
LGD+ AGIKP D S+ EA+ EQISEVK++GL++ VVQPE LK
Sbjct: 428 LGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLK 475
>ref|XP_009414712.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Musa acuminata subsp. malaccensis]
Length = 602
Score = 127 bits (318), Expect = 1e-27
Identities = 77/162 (47%), Positives = 103/162 (63%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S +T DEN+NLER ERV RMT I EDLQ PH+LPYAPL IKD REYFD ++ NALK
Sbjct: 368 SADTLDENSNLERQERVSRMTEI-----EDLQAPHSLPYAPLCIKDPREYFDSQQVNALK 422
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLS-IMKEVAS 1060
+LG + AG K D S++ EA+ QISEVK +GL +P+VQ E+A K LS + ++++S
Sbjct: 423 ALGGTGAGSKTIDYSLNSEEAYSYLMHQISEVKAQGLHNPIVQSEVACKVLSGLTQQISS 482
Query: 1059 T---LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
T L K P + V LP+ E+++ + S+ L F
Sbjct: 483 TRYHLGKNPQES---VLDRLPKRTKDEIMLHWTSIQELLRHF 521
>ref|XP_019704306.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X4 [Elaeis guineensis]
Length = 476
Score = 123 bits (309), Expect = 6e-27
Identities = 66/109 (60%), Positives = 79/109 (72%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
STE SDE N ER+E+V RMT I EDLQ P +LP+APL IKD REYFD ++ANA K
Sbjct: 371 STEISDEKTNQERMEKVSRMTEI-----EDLQAPCSLPFAPLCIKDPREYFDSQQANAFK 425
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALK 1090
+LGD+ GI P D S+ EA+I EQISEVK++GL+ PVVQPE ALK
Sbjct: 426 ALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALK 474
>ref|XP_020679857.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
X4 [Dendrobium catenatum]
Length = 476
Score = 117 bits (294), Expect = 6e-25
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S E D+N + ERLE+ CRMT I EDL+GPH LPYAPL+IKD REYFD ++ANAL+
Sbjct: 242 SLEAFDKNESQERLEKACRMTEI-----EDLRGPHQLPYAPLFIKDPREYFDSQQANALR 296
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGDS AG K TD + + E++ +QISE K+ GL+D +VQ ++A K L+ + + S+
Sbjct: 297 ALGDSNAGFKNTDYNFNLEESYAYLMKQISEAKVSGLND-IVQSDVAHKVLNGLNQHLSS 355
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
+ K P + V LP E++I + S+ L F
Sbjct: 356 TKQHIGKGPFES---VLDQLPSRTKDELMIHWSSIQELLRHF 394
>ref|XP_020679856.1| probable RNA polymerase II transcription factor B subunit 1-1 isoform
X3 [Dendrobium catenatum]
Length = 556
Score = 117 bits (294), Expect = 1e-24
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S E D+N + ERLE+ CRMT I EDL+GPH LPYAPL+IKD REYFD ++ANAL+
Sbjct: 366 SLEAFDKNESQERLEKACRMTEI-----EDLRGPHQLPYAPLFIKDPREYFDSQQANALR 420
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGDS AG K TD + + E++ +QISE K+ GL+D +VQ ++A K L+ + + S+
Sbjct: 421 ALGDSNAGFKNTDYNFNLEESYAYLMKQISEAKVSGLND-IVQSDVAHKVLNGLNQHLSS 479
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
+ K P + V LP E++I + S+ L F
Sbjct: 480 TKQHIGKGPFES---VLDQLPSRTKDELMIHWSSIQELLRHF 518
>ref|XP_020679855.1| probable RNA polymerase II transcription factor B subunit 1-3 isoform
X2 [Dendrobium catenatum]
Length = 593
Score = 117 bits (294), Expect = 1e-24
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Frame = -1
Query: 1416 STETSDENANLERLERVCRMTSIC*RGIEDLQGPHNLPYAPLYIKDSREYFDCRKANALK 1237
S E D+N + ERLE+ CRMT I EDL+GPH LPYAPL+IKD REYFD ++ANAL+
Sbjct: 366 SLEAFDKNESQERLEKACRMTEI-----EDLRGPHQLPYAPLFIKDPREYFDSQQANALR 420
Query: 1236 SLGDSRAGIKPTDRSVSFGEAHISFAEQISEVKLKGLSDPVVQPEIALKFLSIMKEVAST 1057
+LGDS AG K TD + + E++ +QISE K+ GL+D +VQ ++A K L+ + + S+
Sbjct: 421 ALGDSNAGFKNTDYNFNLEESYAYLMKQISEAKVSGLND-IVQSDVAHKVLNGLNQHLSS 479
Query: 1056 ----LSKEPNKC*GLVFYMLPEGISVEVIIEYPSMVIQLTSF 943
+ K P + V LP E++I + S+ L F
Sbjct: 480 TKQHIGKGPFES---VLDQLPSRTKDELMIHWSSIQELLRHF 518