BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028210
         (2815 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon jap...  1053   0.0  
ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonat...  1050   0.0  
gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]   1050   0.0  
ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonat...  1049   0.0  
gb|AEX94499.1| RNA polymerase beta (chloroplast) [Ruscus aculeatus]  1048   0.0  
ref|YP_009180099.1| RNA polymerase beta (chloroplast) [Polygonat...  1047   0.0  
ref|YP_009335324.1| RNA polymerase beta (chloroplast) [Nolina at...  1044   0.0  
gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hoo...  1044   0.0  
ref|YP_009431209.1| RNA polymerase beta (chloroplast) [Maianthem...  1043   0.0  
gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion whe...  1041   0.0  
gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus aspa...  1041   0.0  
gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum st...  1040   0.0  
ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus...  1039   0.0  
ref|YP_009431123.1| RNA polymerase beta (chloroplast) [Asparagus...  1039   0.0  
ref|YP_009432548.1| RNA polymerase beta (chloroplast) [Cordyline...  1038   0.0  
emb|CUS18626.1| RNA polymerase beta (plastid) [Asparagus officin...  1038   0.0  
gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria tr...  1036   0.0  
ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhe...  1036   0.0  
gb|AEX94475.1| RNA polymerase beta (chloroplast) [Scadoxus cinna...  1036   0.0  
gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena as...  1036   0.0  

>gb|AEX94498.1| RNA polymerase beta (chloroplast) [Ophiopogon japonicus]
          Length = 685

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 522/538 (97%), Positives = 524/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEP+VWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPVVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV
Sbjct: 568  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>ref|YP_009432294.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
 gb|ATB18549.1| RNA polymerase beta (chloroplast) [Polygonatum stenophyllum]
          Length = 685

 Score = 1050 bits (2716), Expect = 0.0
 Identities = 522/538 (97%), Positives = 523/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGH VLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHSVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV
Sbjct: 568  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>gb|AEX94497.1| RNA polymerase beta (chloroplast) [Liriope spicata]
          Length = 685

 Score = 1050 bits (2715), Expect = 0.0
 Identities = 521/538 (96%), Positives = 523/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIE 
Sbjct: 568  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEF 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKK+IRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKKIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>ref|YP_009183190.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
 ref|YP_009236351.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
            sibiricum]
 gb|ALM87709.1| RNA polymerase beta (chloroplast) [Polygonatum verticillatum]
 gb|AMF84065.1| DNA-directed RNA polymerase beta' chain (chloroplast) [Polygonatum
            sibiricum]
          Length = 686

 Score = 1049 bits (2712), Expect = 0.0
 Identities = 521/538 (96%), Positives = 523/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 149  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 208

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 209  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 268

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 269  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 328

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 329  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 388

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 389  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 448

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGH VLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 449  MQGHSVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 508

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 509  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 568

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            N+KVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV
Sbjct: 569  NEKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 628

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 629  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 686


>gb|AEX94499.1| RNA polymerase beta (chloroplast) [Ruscus aculeatus]
          Length = 685

 Score = 1048 bits (2709), Expect = 0.0
 Identities = 519/538 (96%), Positives = 524/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGN+RGICANRYN YNCGN+Q
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNQRGICANRYNPYNCGNHQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRI+LDSPFWLRWRLDHR+IGSREVPIEV
Sbjct: 568  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRIHLDSPFWLRWRLDHRIIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>ref|YP_009180099.1| RNA polymerase beta (chloroplast) [Polygonatum cyrtonema]
 gb|ALL96467.1| RNA polymerase beta (chloroplast) [Polygonatum cyrtonema]
          Length = 686

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 520/538 (96%), Positives = 523/538 (97%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 149  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 208

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDL+IIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 209  DLDLQIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 268

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 269  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 328

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 329  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 388

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 389  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 448

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGH VLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 449  MQGHSVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 508

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNR+GICANRYN YNCGNYQ
Sbjct: 509  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRQGICANRYNPYNCGNYQ 568

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV
Sbjct: 569  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 628

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 629  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 686


>ref|YP_009335324.1| RNA polymerase beta (chloroplast) [Nolina atopocarpa]
 gb|APO12382.1| RNA polymerase beta (chloroplast) [Nolina atopocarpa]
          Length = 682

 Score = 1044 bits (2700), Expect = 0.0
 Identities = 519/538 (96%), Positives = 521/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 145  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 204

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 205  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 264

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 265  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 324

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 325  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 384

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 385  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 444

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 445  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 504

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNY 
Sbjct: 505  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYP 564

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
             KKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINL SPFWLRW+LDHRVIGSREVPIEV
Sbjct: 565  KKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLASPFWLRWQLDHRVIGSREVPIEV 624

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 625  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 682


>gb|AEX94494.1| RNA polymerase beta (chloroplast) [Beaucarnea hookeri]
          Length = 685

 Score = 1044 bits (2700), Expect = 0.0
 Identities = 520/538 (96%), Positives = 521/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
             KKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINL SPFWLRWRLDHRVIGSREVPIEV
Sbjct: 568  KKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLASPFWLRWRLDHRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIR IYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRSIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>ref|YP_009431209.1| RNA polymerase beta (chloroplast) [Maianthemum bicolor]
 gb|ASW26645.1| RNA polymerase beta (chloroplast) [Maianthemum bicolor]
          Length = 687

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 520/540 (96%), Positives = 522/540 (96%), Gaps = 2/540 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEES GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESPGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLY--NCGN 1256
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN Y  NCGN
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNSNCGN 567

Query: 1257 YQNKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 1436
            YQNKKV+ NNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI
Sbjct: 568  YQNKKVEKNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 627

Query: 1437 EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 687


>gb|AEX94495.1| RNA polymerase beta (chloroplast) [Dasylirion wheeleri]
          Length = 685

 Score = 1041 bits (2692), Expect = 0.0
 Identities = 519/538 (96%), Positives = 520/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVE EWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVETEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
             KKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINL SPFWLRWRLDHRVIGSREVPIEV
Sbjct: 568  KKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLASPFWLRWRLDHRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIR IYIRTTVGHVSFYREIEEAIQGFCRAYSYTI
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRSIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 685


>gb|AEX94478.1| RNA polymerase beta (chloroplast) [Asparagus asparagoides]
          Length = 689

 Score = 1041 bits (2691), Expect = 0.0
 Identities = 517/540 (95%), Positives = 521/540 (96%), Gaps = 2/540 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 150  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 209

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRII+DNSL+EWKELGDEE  GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 210  DLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 269

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 270  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 329

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 330  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 389

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 390  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 449

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 450  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 509

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 510  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 569

Query: 1263 NKK--VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 1436
            NKK  VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+
Sbjct: 570  NKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPV 629

Query: 1437 EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSY+I
Sbjct: 630  EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYSI 689


>gb|AEX94501.1| RNA polymerase beta (chloroplast) [Maianthemum stellatum]
          Length = 689

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 521/542 (96%), Positives = 523/542 (96%), Gaps = 4/542 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN--LYNCGN 1256
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN   YNCGN
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNYNCGN 567

Query: 1257 YQNKKVDNN--NYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREV 1430
            YQNKKV+ N  NYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREV
Sbjct: 568  YQNKKVEKNNYNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREV 627

Query: 1431 PIEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSY 1610
            PIEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSY
Sbjct: 628  PIEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSY 687

Query: 1611 TI 1616
            TI
Sbjct: 688  TI 689


>ref|YP_009370012.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
 gb|ARO91418.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
          Length = 686

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 516/540 (95%), Positives = 521/540 (96%), Gaps = 2/540 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 147  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 206

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRII+DNSL+EWKELGDEE  GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 207  DLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 266

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 267  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 326

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 327  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 386

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 387  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 446

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 447  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 506

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 507  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 566

Query: 1263 NKK--VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 1436
            NKK  VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+
Sbjct: 567  NKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPV 626

Query: 1437 EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 627  EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 686


>ref|YP_009431123.1| RNA polymerase beta (chloroplast) [Asparagus schoberioides]
 gb|AEX94477.1| RNA polymerase beta (chloroplast) [Asparagus officinalis]
 gb|ASW26559.1| RNA polymerase beta (chloroplast) [Asparagus schoberioides]
          Length = 689

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 516/540 (95%), Positives = 521/540 (96%), Gaps = 2/540 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 150  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 209

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRII+DNSL+EWKELGDEE  GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 210  DLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 269

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 270  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 329

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 330  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 389

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 390  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 449

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 450  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 509

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 510  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 569

Query: 1263 NKK--VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 1436
            NKK  VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+
Sbjct: 570  NKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPV 629

Query: 1437 EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 630  EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 689


>ref|YP_009432548.1| RNA polymerase beta (chloroplast) [Cordyline indivisa]
 gb|AEX94492.1| RNA polymerase beta (chloroplast) [Cordyline australis]
 gb|ATB18831.1| RNA polymerase beta (chloroplast) [Cordyline indivisa]
          Length = 685

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 512/538 (95%), Positives = 519/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIII+NSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRM+LAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIENSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMKLAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQ IASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQQIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRV+GSREVPIEV
Sbjct: 568  NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVVGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLI GSVKKEI CIYIRTTVGHVSFYREIEEA+QGFCRAY+Y I
Sbjct: 628  QYESLGTYHEIYGHYLIAGSVKKEIHCIYIRTTVGHVSFYREIEEAVQGFCRAYAYAI 685


>emb|CUS18626.1| RNA polymerase beta (plastid) [Asparagus officinalis]
          Length = 689

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 515/540 (95%), Positives = 521/540 (96%), Gaps = 2/540 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 150  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 209

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRII+DNSL+EWKELGDEE  GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 210  DLDLRIILDNSLVEWKELGDEEPVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 269

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 270  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 329

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 330  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 389

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 390  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 449

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 450  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 509

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVP+QDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 510  AQAEARLLMFSHMNLLSPAIGDPISVPSQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 569

Query: 1263 NKK--VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPI 1436
            NKK  VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP+
Sbjct: 570  NKKVDVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPV 629

Query: 1437 EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFC+AYSY+I
Sbjct: 630  EVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCQAYSYSI 689


>gb|AEX94500.1| RNA polymerase beta (chloroplast) [Sansevieria trifasciata]
          Length = 688

 Score = 1036 bits (2679), Expect = 0.0
 Identities = 516/541 (95%), Positives = 520/541 (96%), Gaps = 3/541 (0%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELG+EESAGNEWEDRKIRRRKDFLVRRMELAKHFIR NVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGEEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRINVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHI SNIGIAK+KIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIVSNIGIAKNKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNY---KYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVP 1433
            NKKVD NNY   KYTKEKEPYFCSSYDALGAY+QKRINLDSPFWLRWRLDHRVIGSREVP
Sbjct: 568  NKKVDKNNYKYNKYTKEKEPYFCSSYDALGAYQQKRINLDSPFWLRWRLDHRVIGSREVP 627

Query: 1434 IEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYT 1613
            IEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYT
Sbjct: 628  IEVQYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYT 687

Query: 1614 I 1616
            I
Sbjct: 688  I 688


>ref|YP_009334481.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
 gb|APO11291.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
          Length = 682

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 513/538 (95%), Positives = 517/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIREQLA
Sbjct: 145  FSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIREQLA 204

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEES GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 205  DLDLRIIIDNSLVEWKELGDEESVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 264

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 265  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 324

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 325  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 384

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 385  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 444

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 445  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 504

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 505  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 564

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NK VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEV
Sbjct: 565  NKTVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEV 624

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTT+G VSFYREIEEA+QGFCRAYSY I
Sbjct: 625  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTMGRVSFYREIEEAVQGFCRAYSYAI 682


>gb|AEX94475.1| RNA polymerase beta (chloroplast) [Scadoxus cinnabarinus]
          Length = 685

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 514/538 (95%), Positives = 517/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARPI KKPTFLRLRGLFEYEIQSWKYSIPLFFT QGFETFRNREISTGAGAIREQLA
Sbjct: 148  FSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTNQGFETFRNREISTGAGAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRD HNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDVHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLT+GNRRGIC NRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTMGNRRGICENRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NK VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEV
Sbjct: 568  NKTVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEA+QGFCRAYSY I
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAVQGFCRAYSYAI 685


>gb|AEX94462.1| RNA polymerase beta (chloroplast) [Anemarrhena asphodeloides]
          Length = 685

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 513/538 (95%), Positives = 517/538 (96%)
 Frame = +3

Query: 3    FSFARPIVKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGAGAIREQLA 182
            FSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGA AIREQLA
Sbjct: 148  FSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFETFRNREISTGASAIREQLA 207

Query: 183  DLDLRIIIDNSLLEWKELGDEESAGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 362
            DLDLRIIIDNSL+EWKELGDEES GNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM
Sbjct: 208  DLDLRIIIDNSLVEWKELGDEESVGNEWEDRKIRRRKDFLVRRMELAKHFIRTNVEPEWM 267

Query: 363  VXXXXXXXXXXXXXIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 542
            V             IIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ
Sbjct: 268  VLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLATSRSTPGELVMCQ 327

Query: 543  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 722
            EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI
Sbjct: 328  EKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVI 387

Query: 723  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 902
            VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV
Sbjct: 388  VVGPSLSLHQCGLPREIAIELFQTFVIRGLIRQHIASNIGIAKSKIREKEPIVWEILQEV 447

Query: 903  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 1082
            MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE
Sbjct: 448  MQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLE 507

Query: 1083 AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNLYNCGNYQ 1262
            AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN YNCGNYQ
Sbjct: 508  AQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYNPYNCGNYQ 567

Query: 1263 NKKVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDHRVIGSREVPIEV 1442
            NK VDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLD RVIGSREVPIEV
Sbjct: 568  NKTVDNNNYKYTKEKEPYFCSSYDALGAYRQKRINLDSPFWLRWRLDQRVIGSREVPIEV 627

Query: 1443 QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTVGHVSFYREIEEAIQGFCRAYSYTI 1616
            QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTT+G VSFYREIEEA+QGFCRAYSY I
Sbjct: 628  QYESLGTYHEIYGHYLIVGSVKKEIRCIYIRTTMGRVSFYREIEEAVQGFCRAYSYAI 685