BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00028209
         (1332 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin]                309   e-102
gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Popul...   309   e-102
gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburn...   308   e-101
gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chl...   308   e-101
gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburn...   308   e-101
ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsic...   307   e-101
gb|AON75811.1| RNA polymerase beta' subunit (chloroplast) [Popul...   307   e-101
gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycope...   307   e-101
ref|YP_009336368.1| RNA polymerase beta (chloroplast) [Nicotiana...   307   e-101
ref|WP_082924808.1| hypothetical protein [Paenarthrobacter nicot...   306   e-101
dbj|BAC77550.1| RNA polymerase beta' subunit, partial (chloropla...   305   e-100
gb|AQM54407.1| RNA polymerase beta' subunit, partial (chloroplas...   305   e-100
dbj|BAC77573.1| RNA polymerase beta' subunit, partial (chloropla...   302   4e-99
ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus]      302   4e-99
gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [G...   310   6e-99
gb|AAZ03990.1| RNA polymerase beta' chain, partial (chloroplast)...   319   1e-98
gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast...   318   3e-98
gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagas...   299   4e-98
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a...   317   5e-98
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell...   317   5e-98

>gb|ANQ46316.1| rpoC1 (chloroplast) [Pogostemon cablin]
          Length = 152

 Score =  309 bits (792), Expect = e-102
 Identities = 145/152 (95%), Positives = 146/152 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NFYSMID YKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNPNFYSMIDWYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>gb|AON75821.1| RNA polymerase beta' subunit (chloroplast) [Populus adenopoda]
 gb|AQM54413.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           tomentosa]
          Length = 152

 Score =  309 bits (791), Expect = e-102
 Identities = 143/152 (94%), Positives = 147/152 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF+SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFFSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLK+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCDV 152


>gb|AII18578.1| RNA polymerase beta subunit (chloroplast) [Viburnum amplificatum]
          Length = 152

 Score =  308 bits (790), Expect = e-101
 Identities = 144/152 (94%), Positives = 145/152 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI  WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICTCGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>gb|AMO44331.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
           ginseng]
 gb|AMO44333.1| RNA polymerase beta largest subunit, partial (chloroplast) [Panax
           ginseng]
          Length = 151

 Score =  308 bits (789), Expect = e-101
 Identities = 144/151 (95%), Positives = 145/151 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI  WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 566
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCD 151


>gb|AII18577.1| RNA polymerase beta subunit (chloroplast) [Viburnum acerifolium]
 gb|AII18579.1| RNA polymerase beta subunit (chloroplast) [Viburnum carlesii]
 gb|AII18580.1| RNA polymerase beta subunit (chloroplast) [Viburnum cassinoides]
 gb|AII18581.1| RNA polymerase beta subunit (chloroplast) [Viburnum clemensae]
 gb|AII18582.1| RNA polymerase beta subunit (chloroplast) [Viburnum cylindricum]
 gb|AII18583.1| RNA polymerase beta subunit (chloroplast) [Viburnum dentatum]
 gb|AII18584.1| RNA polymerase beta subunit (chloroplast) [Viburnum dilatatum]
 gb|AII18585.1| RNA polymerase beta subunit (chloroplast) [Viburnum erubescens]
 gb|AII18586.1| RNA polymerase beta subunit (chloroplast) [Viburnum grandiflorum]
 gb|AII18587.1| RNA polymerase beta subunit (chloroplast) [Viburnum lantanoides]
 gb|AII18588.1| RNA polymerase beta subunit (chloroplast) [Viburnum lentago]
 gb|AII18589.1| RNA polymerase beta subunit (chloroplast) [Viburnum lutescens]
 gb|AII18590.1| RNA polymerase beta subunit (chloroplast) [Viburnum molle]
 gb|AII18591.1| RNA polymerase beta subunit (chloroplast) [Viburnum opulus]
 gb|AII18592.1| RNA polymerase beta subunit (chloroplast) [Viburnum plicatum]
 gb|AII18593.1| RNA polymerase beta subunit (chloroplast) [Viburnum punctatum]
 gb|AII18594.1| RNA polymerase beta subunit (chloroplast) [Viburnum sieboldii]
 gb|AII18595.1| RNA polymerase beta subunit (chloroplast) [Viburnum taiwanianum]
 gb|AII18596.1| RNA polymerase beta subunit (chloroplast) [Viburnum tinus]
 gb|AII18597.1| RNA polymerase beta subunit (chloroplast) [Viburnum triphyllum]
 gb|AII18598.1| RNA polymerase beta subunit (chloroplast) [Viburnum vernicosum]
          Length = 152

 Score =  308 bits (789), Expect = e-101
 Identities = 144/152 (94%), Positives = 145/152 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI  WANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISTWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGIC CGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICTCGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 ref|YP_009049784.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG89836.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90033.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90142.1| hypothetical protein (mitochondrion) [Capsicum annuum]
          Length = 152

 Score =  307 bits (787), Expect = e-101
 Identities = 144/152 (94%), Positives = 146/152 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN+NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNKNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>gb|AON75811.1| RNA polymerase beta' subunit (chloroplast) [Populus lasiocarpa]
 gb|AON75813.1| RNA polymerase beta' subunit (chloroplast) [Populus tremuloides]
 gb|AON75815.1| RNA polymerase beta' subunit (chloroplast) [Populus tremula]
 gb|AON75817.1| RNA polymerase beta' subunit (chloroplast) [Populus davidiana]
 gb|AON75819.1| RNA polymerase beta' subunit (chloroplast) [Populus euphratica]
 gb|AON75823.1| RNA polymerase beta' subunit (chloroplast) [Salix arbutifolia]
 gb|AON75825.1| RNA polymerase beta' subunit (chloroplast) [Salix triandra]
 gb|AON75827.1| RNA polymerase beta' subunit (chloroplast) [Populus grandidentata]
 gb|AON75829.1| RNA polymerase beta' subunit (chloroplast) [Populus hopeiensis]
 gb|AQM54375.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           trichocarpa]
 gb|AQM54377.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           heterophylla]
 gb|AQM54379.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           ilicifolia]
 gb|AQM54381.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           deltoides]
 gb|AQM54383.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus nigra]
 gb|AQM54385.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           pruinosa]
 gb|AQM54387.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           balsamifera]
 gb|AQM54389.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           angustifolia]
 gb|AQM54391.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           mexicana]
 gb|AQM54393.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           fremontii]
 gb|AQM54395.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           wilsonii]
 gb|AQM54397.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           pamirica]
 gb|AQM54399.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           szechuanica]
 gb|AQM54401.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           suaveolens]
 gb|AQM54403.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           laurifolia]
 gb|AQM54405.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           przewalskii]
 gb|AQM54409.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           simonii]
 gb|AQM54411.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           talassica]
 gb|AQM54415.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           afghanica]
 gb|AQM54417.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus alba]
          Length = 152

 Score =  307 bits (786), Expect = e-101
 Identities = 143/152 (94%), Positives = 146/152 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLK+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKQLEGLVYCDV 152


>gb|AJO25103.1| RNA polymerase beta (chloroplast) [Solanum lycopersicum]
 gb|ALN11564.1| RNA polymerase beta (chloroplast) [Iochroma edule]
 gb|AMX21679.1| RNA polymerase beta (chloroplast) [Iochroma parvifolium]
 gb|PHT61089.1| hypothetical protein T459_35062 [Capsicum annuum]
 gb|PHT87510.1| hypothetical protein T459_09616 [Capsicum annuum]
          Length = 152

 Score =  307 bits (786), Expect = e-101
 Identities = 144/152 (94%), Positives = 145/152 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>ref|YP_009336368.1| RNA polymerase beta (chloroplast) [Nicotiana otophora]
 gb|ALT14463.1| RNA polymerase beta (chloroplast) [Nicotiana otophora]
          Length = 155

 Score =  307 bits (786), Expect = e-101
 Identities = 145/155 (93%), Positives = 146/155 (94%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVI  EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIEDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FD 578
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDVSFD 155


>ref|WP_082924808.1| hypothetical protein [Paenarthrobacter nicotinovorans]
          Length = 152

 Score =  306 bits (784), Expect = e-101
 Identities = 143/152 (94%), Positives = 145/152 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NF SMIDRYKHQQLRIG VSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNHNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIAN+LDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANILDKPLKELEGLVYCDV 152


>dbj|BAC77550.1| RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
           sylvestris]
          Length = 150

 Score =  305 bits (782), Expect = e-100
 Identities = 143/150 (95%), Positives = 144/150 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NF SMIDRYKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYC 563
           THVWYLKRLPSYIANLLDKPLKELEGLVYC
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYC 150


>gb|AQM54407.1| RNA polymerase beta' subunit, partial (chloroplast) [Populus
           ussuriensis]
          Length = 152

 Score =  305 bits (780), Expect = e-100
 Identities = 142/152 (93%), Positives = 145/152 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI AW NKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWTNKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKE+PKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGEEKEEPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKP K+LEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPPKQLEGLVYCDV 152


>dbj|BAC77573.1| RNA polymerase beta' subunit, partial (chloroplast) [Nicotiana
           tomentosiformis]
          Length = 149

 Score =  302 bits (773), Expect = 4e-99
 Identities = 142/149 (95%), Positives = 143/149 (95%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MN NF SMIDRYKHQQLRIGLVSPQQI AWA KILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVY 560
           THVWYLKRLPSYIANLLDKPLKELEGLVY
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVY 149


>ref|WP_042855006.1| hypothetical protein [Staphylococcus aureus]
          Length = 152

 Score =  302 bits (773), Expect = 4e-99
 Identities = 141/152 (92%), Positives = 144/152 (94%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI AWA KILPNGE VGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG +KE PKFCE+CGV FVDSRIRRYQMGYI+LACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [Gossypium
           raimondii]
          Length = 370

 Score =  310 bits (793), Expect = 6e-99
 Identities = 151/172 (87%), Positives = 155/172 (90%)
 Frame = +3

Query: 54  ESFPCI*EELPD**EGSLI*MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEI 233
           ESF  +  EL    EGSLI MNQNF SMIDRYKHQQLRIG VSPQQI AWA KILPNGE 
Sbjct: 200 ESFRLLVRELRSL-EGSLIGMNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGET 258

Query: 234 VGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVA 413
           VGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG +KE PKFCE+CGV 
Sbjct: 259 VGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVE 318

Query: 414 FVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           FVDSRIRRYQMGYI+LACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 319 FVDSRIRRYQMGYIRLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 370


>gb|AAZ03990.1| RNA polymerase beta' chain, partial (chloroplast) [Yucca
           schidigera]
          Length = 693

 Score =  319 bits (818), Expect = 1e-98
 Identities = 152/161 (94%), Positives = 155/161 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNFYSMIDRYKHQQLRIG VSPQQI+AWANK LPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFYSMIDRYKHQQLRIGPVSPQQIRAWANKTLPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERI GPIKSGICACGNYRVIGAEKEDPKFCEECGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEECGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDRNLHFT 596
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV FDR L+F+
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV-FDRYLNFS 160


>gb|ABU85440.1| RNA polymerase beta subunit, partial (chloroplast) [Musa acuminata]
          Length = 695

 Score =  318 bits (815), Expect = 3e-98
 Identities = 149/152 (98%), Positives = 150/152 (98%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERI GPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 569
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>gb|ALI91113.1| RpoC1, partial (chloroplast) [Cassinopsis madagascariensis]
          Length = 147

 Score =  299 bits (766), Expect = 4e-98
 Identities = 140/147 (95%), Positives = 142/147 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNF SMIDRYKHQQLRIG VSPQQI AWANKILPNGEIVGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIG EKEDPKFCE+CGV F+DSRIRRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFIDSRIRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGL 554
           THVWYLKRLPSYIANLLDKPLKELEGL
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGL 147


>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
 gb|AEK94499.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
          Length = 690

 Score =  317 bits (813), Expect = 5e-98
 Identities = 147/156 (94%), Positives = 151/156 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 581
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
 gb|AEK94416.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
          Length = 690

 Score =  317 bits (813), Expect = 5e-98
 Identities = 147/156 (94%), Positives = 151/156 (96%)
 Frame = +3

Query: 114 MNQNFYSMIDRYKHQQLRIGLVSPQQIKAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 293
           MNQNFYSMIDRYKHQQLRIGLVSP+QI AWANKILPNGE+VGEVTKPYTFHYKTNKPEKD
Sbjct: 1   MNQNFYSMIDRYKHQQLRIGLVSPEQISAWANKILPNGEVVGEVTKPYTFHYKTNKPEKD 60

Query: 294 GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEECGVAFVDSRIRRYQMGYIKLACPV 473
           GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCE+CGV FVDSR+RRYQMGYIKLACPV
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120

Query: 474 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 581
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156